Warning: Permanently added '150.239.222.255' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6940943-fedora-39-s390x --chroot fedora-39-s390x Version: 0.70 PID: 65444 Logging PID: 65445 Task: {'appstream': False, 'background': True, 'build_id': 6940943, 'buildroot_pkgs': [], 'chroot': 'fedora-39-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': 'abb5f680d5663683bd1d3faa9996dbe9c8e1f1c7', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'COPASI', 'package_version': '4.42.284-5', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-39-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/releng', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/releng', 'tags': [], 'task_id': '6940943-fedora-39-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/COPASI', '/var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI'... Running: git checkout abb5f680d5663683bd1d3faa9996dbe9c8e1f1c7 -- cmd: ['git', 'checkout', 'abb5f680d5663683bd1d3faa9996dbe9c8e1f1c7', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI rc: 0 stdout: stderr: Note: switching to 'abb5f680d5663683bd1d3faa9996dbe9c8e1f1c7'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at abb5f68 automatic import of COPASI Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading COPASI-Build-284.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o COPASI-Build-284.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/COPASI/COPASI-Build-284.tar.gz/md5/ef461df70cde8900517de385642ee4ae/COPASI-Build-284.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.1M 100 25.1M 0 0 4719k 0 0:00:05 0:00:05 --:--:-- 5387k INFO: Reading stdout from command: md5sum COPASI-Build-284.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705987227.553682 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI/COPASI.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1705987227.553682 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI/COPASI.spec) Config(fedora-39-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1705987227.553682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-s390x-bootstrap-1705987227.553682/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8762d4e942255ae5f22c1ca5cdcbea9118d53523b90ef15d705fc17a7574e0a0/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8762d4e942255ae5f22c1ca5cdcbea9118d53523b90ef15d705fc17a7574e0a0/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 3.4 MB/s | 18 MB 00:05 Additional repo http_kojipkgs_fedoraproject_org 247 MB/s | 68 MB 00:00 fedora 12 MB/s | 79 MB 00:06 updates 3.9 MB/s | 23 MB 00:05 Last metadata expiration check: 0:00:05 ago on Tue Jan 23 05:21:34 2024. Package python3-dnf-4.18.1-2.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: python3-dnf-plugins-core noarch 4.4.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 496 k dnf-data noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k python3-dnf noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 549 k yum noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs s390x 1:1.14.10-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 159 k python3-dateutil noarch 1:2.8.2-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus s390x 1.3.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 147 k python3-distro noarch 1.9.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd s390x 235-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k Transaction Summary ========================================================================================================================= Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): dbus-libs-1.14.10-1.fc40.s390x.rpm 5.0 MB/s | 159 kB 00:00 (2/11): python3-distro-1.9.0-1.fc40.noarch.rpm 6.2 MB/s | 45 kB 00:00 (3/11): python3-dbus-1.3.2-4.fc39.s390x.rpm 3.5 MB/s | 147 kB 00:00 (4/11): python3-dateutil-2.8.2-11.fc40.noarch.r 7.8 MB/s | 345 kB 00:00 (5/11): python3-dnf-plugins-core-4.4.4-1.fc40.n 33 MB/s | 302 kB 00:00 (6/11): python3-six-1.16.0-12.fc39.noarch.rpm 5.9 MB/s | 41 kB 00:00 (7/11): python3-systemd-235-5.fc39.s390x.rpm 15 MB/s | 100 kB 00:00 (8/11): dnf-data-4.18.2-1.fc40.noarch.rpm 5.7 MB/s | 39 kB 00:00 (9/11): dnf-4.18.2-1.fc40.noarch.rpm 46 MB/s | 496 kB 00:00 (10/11): python3-dnf-4.18.2-1.fc40.noarch.rpm 53 MB/s | 549 kB 00:00 (11/11): yum-4.18.2-1.fc40.noarch.rpm 6.0 MB/s | 37 kB 00:00 -------------------------------------------------------------------------------- Total 35 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.18.2-1.fc40.noarch 1/15 Upgrading : python3-dnf-4.18.2-1.fc40.noarch 2/15 Upgrading : dnf-4.18.2-1.fc40.noarch 3/15 Running scriptlet: dnf-4.18.2-1.fc40.noarch 3/15 Installing : python3-systemd-235-5.fc39.s390x 4/15 Installing : python3-six-1.16.0-12.fc39.noarch 5/15 Installing : python3-dateutil-1:2.8.2-11.fc40.noarch 6/15 Installing : python3-distro-1.9.0-1.fc40.noarch 7/15 Installing : dbus-libs-1:1.14.10-1.fc40.s390x 8/15 Installing : python3-dbus-1.3.2-4.fc39.s390x 9/15 Installing : python3-dnf-plugins-core-4.4.4-1.fc40.noarch 10/15 Upgrading : yum-4.18.2-1.fc40.noarch 11/15 Cleanup : yum-4.18.1-2.fc39.noarch 12/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : dnf-4.18.1-2.fc39.noarch 13/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : python3-dnf-4.18.1-2.fc39.noarch 14/15 Cleanup : dnf-data-4.18.1-2.fc39.noarch 15/15 Running scriptlet: dnf-data-4.18.1-2.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-1.fc40.s390x 1/15 Verifying : python3-dateutil-1:2.8.2-11.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-4.fc39.s390x 3/15 Verifying : python3-distro-1.9.0-1.fc40.noarch 4/15 Verifying : python3-dnf-plugins-core-4.4.4-1.fc40.noarch 5/15 Verifying : python3-six-1.16.0-12.fc39.noarch 6/15 Verifying : python3-systemd-235-5.fc39.s390x 7/15 Verifying : dnf-4.18.2-1.fc40.noarch 8/15 Verifying : dnf-4.18.1-2.fc39.noarch 9/15 Verifying : dnf-data-4.18.2-1.fc40.noarch 10/15 Verifying : dnf-data-4.18.1-2.fc39.noarch 11/15 Verifying : python3-dnf-4.18.2-1.fc40.noarch 12/15 Verifying : python3-dnf-4.18.1-2.fc39.noarch 13/15 Verifying : yum-4.18.2-1.fc40.noarch 14/15 Verifying : yum-4.18.1-2.fc39.noarch 15/15 Upgraded: dnf-4.18.2-1.fc40.noarch dnf-data-4.18.2-1.fc40.noarch python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch Installed: dbus-libs-1:1.14.10-1.fc40.s390x python3-dateutil-1:2.8.2-11.fc40.noarch python3-dbus-1.3.2-4.fc39.s390x python3-distro-1.9.0-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.s390x Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1705987227.553682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.s390x rpm-sequoia-1.5.0-1.fc39.s390x python3-dnf-4.18.2-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch yum-4.18.2-1.fc40.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 31 kB/s | 1.5 kB 00:00 Copr repository 3.4 MB/s | 18 MB 00:05 Additional repo http_kojipkgs_fedoraproject_org 128 kB/s | 3.8 kB 00:00 fedora 68 kB/s | 3.8 kB 00:00 updates 89 kB/s | 4.8 kB 00:00 Dependencies resolved. ======================================================================================================================================== Package Arch Version Repository Size ======================================================================================================================================== Installing group/module packages: bash s390x 5.2.26-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53 k coreutils s390x 9.4-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M cpio s390x 2.14-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 276 k diffutils s390x 3.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 398 k fedora-release-common noarch 40-0.29 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k findutils s390x 1:4.9.0-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 488 k gawk s390x 5.3.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack s390x 2.38.9000-33.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 95 k grep s390x 3.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 294 k gzip s390x 1.12-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 166 k info s390x 7.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 195 k patch s390x 2.7.6-22.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134 k redhat-rpm-config noarch 280-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 71 k sed s390x 4.8-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 300 k shadow-utils s390x 2:4.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M tar s390x 2:1.35-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 865 k unzip s390x 6.0-62.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194 k util-linux s390x 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M which s390x 2.21-40.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k xz s390x 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 532 k Installing dependencies: alternatives s390x 1.26-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k ansible-srpm-macros noarch 1-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs s390x 4.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125 k authselect s390x 1.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 143 k authselect-libs s390x 1.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 233 k basesystem noarch 11-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k binutils s390x 2.41-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.9 M binutils-gold s390x 2.41-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 996 k bzip2-libs s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 46 k ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863 k coreutils-common s390x 9.4-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M cracklib s390x 2.9.11-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83 k crypto-policies noarch 20231204-1.git1e3a2e4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69 k curl s390x 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 372 k cyrus-sasl-lib s390x 2.1.28-17.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 820 k debugedit s390x 5.0-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81 k dwz s390x 0.15-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144 k ed s390x 1.20-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83 k efi-srpm-macros noarch 5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k elfutils s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 571 k elfutils-debuginfod-client s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k elfutils-default-yama-scope noarch 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k elfutils-libelf s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 200 k elfutils-libs s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 276 k fedora-gpg-keys noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 119 k fedora-release noarch 40-0.29 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10 k fedora-release-identity-basic noarch 40-0.29 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k fedora-repos noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.3 k fedora-repos-rawhide noarch 40-0.2 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.9 k file s390x 5.45-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 49 k file-libs s390x 5.45-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 769 k filesystem s390x 3.18-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26 k forge-srpm-macros noarch 0.2.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18 k fpc-srpm-macros noarch 1.3-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.4 k gdb-minimal s390x 14.1-5.fc40 copr_base 4.2 M gdbm s390x 1:1.23-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 151 k gdbm-libs s390x 1:1.23-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k ghc-srpm-macros noarch 1.6.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.1 k glibc s390x 2.38.9000-33.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 M glibc-common s390x 2.38.9000-33.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393 k glibc-gconv-extra s390x 2.38.9000-33.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 M gmp s390x 1:6.2.1-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 325 k gnat-srpm-macros noarch 6-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k go-srpm-macros noarch 3.3.1-1.fc40 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 111 k libmount s390x 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 158 k libnghttp2 s390x 1.59.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 79 k libnsl2 s390x 2.0.0-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30 k libpkgconf s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k libpsl s390x 0.21.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 64 k libpwquality s390x 1.4.5-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109 k libselinux s390x 3.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 92 k libsemanage s390x 3.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 119 k libsepol s390x 3.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 346 k libsmartcols s390x 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70 k libssh s390x 0.10.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 209 k libssh-config noarch 0.10.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.1 k libstdc++ s390x 14.0.1-0.2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 973 k libtasn1 s390x 4.19.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 77 k libtirpc s390x 1.3.4-1.rc1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 96 k libunistring s390x 1.1-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 556 k libutempter s390x 1.2.1-10.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26 k libuuid s390x 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 29 k libverto s390x 0.3.2-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k libxcrypt s390x 4.4.36-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 123 k libxml2 s390x 2.12.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 705 k libzstd s390x 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 342 k lua-libs s390x 5.4.6-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k lua-srpm-macros noarch 1-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.6 k lz4-libs s390x 1.9.4-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81 k mpfr s390x 4.2.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 297 k ncurses-base noarch 6.4-9.20240113.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 63 k ncurses-libs s390x 6.4-9.20240113.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 362 k ocaml-srpm-macros noarch 9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.0 k openblas-srpm-macros noarch 2-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.5 k openldap s390x 2.6.6-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262 k openssl-libs s390x 1:3.1.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 M p11-kit s390x 0.25.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 519 k p11-kit-trust s390x 0.25.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 142 k package-notes-srpm-macros noarch 0.5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k pam s390x 1.5.3-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 520 k pam-libs s390x 1.5.3-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 59 k pcre2 s390x 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 250 k pcre2-syntax noarch 10.42-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 143 k perl-srpm-macros noarch 1-51.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.0 k pkgconf s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k pkgconf-m4 noarch 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k pkgconf-pkg-config s390x 1.9.5-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 9.6 k popt s390x 1.19-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62 k publicsuffix-list-dafsa noarch 20240107-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k pyproject-srpm-macros noarch 1.11.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15 k python-srpm-macros noarch 3.12-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25 k qt5-srpm-macros noarch 5.15.12-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.4 k qt6-srpm-macros noarch 6.6.1-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.8 k readline s390x 8.2-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230 k rpm s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 509 k rpm-build-libs s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 97 k rpm-libs s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 324 k rpm-sequoia s390x 1.5.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M rust-srpm-macros noarch 25.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k setup noarch 2.14.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 148 k sqlite-libs s390x 3.45.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 761 k systemd-libs s390x 255.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 710 k util-linux-core s390x 2.39.3-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 497 k xxhash-libs s390x 0.8.2-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k xz-libs s390x 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 114 k zig-srpm-macros noarch 1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.0 k zip s390x 3.0-39.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 283 k zlib-ng-compat s390x 2.1.6-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66 k zstd s390x 1.5.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 506 k Installing Groups: Buildsystem building group Transaction Summary ======================================================================================================================================== Install 152 Packages Total size: 52 M Installed size: 179 M Downloading Packages: [SKIPPED] gdb-minimal-14.1-5.fc40.s390x.rpm: Already downloaded [SKIPPED] alternatives-1.26-1.fc40.s390x.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-12.fc40.noarch.rpm: Already downloaded [SKIPPED] audit-libs-4.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] authselect-1.5.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] authselect-libs-1.5.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.26-1.fc40.s390x.rpm: Already downloaded [SKIPPED] binutils-2.41-30.fc40.s390x.rpm: Already downloaded [SKIPPED] binutils-gold-2.41-30.fc40.s390x.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.s390x.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.s390x.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.4-3.fc40.s390x.rpm: Already downloaded [SKIPPED] coreutils-common-9.4-3.fc40.s390x.rpm: Already downloaded [SKIPPED] cpio-2.14-5.fc40.s390x.rpm: Already downloaded [SKIPPED] cracklib-2.9.11-2.fc39.s390x.rpm: Already downloaded [SKIPPED] crypto-policies-20231204-1.git1e3a2e4.fc40.noarch.rpm: Already downloaded [SKIPPED] curl-8.5.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-17.fc40.s390x.rpm: Already downloaded [SKIPPED] debugedit-5.0-12.fc40.s390x.rpm: Already downloaded [SKIPPED] diffutils-3.10-3.fc39.s390x.rpm: Already downloaded [SKIPPED] dwz-0.15-3.fc39.s390x.rpm: Already downloaded [SKIPPED] ed-1.20-1.fc40.s390x.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.190-4.fc40.s390x.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.190-4.fc40.s390x.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.190-4.fc40.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.190-4.fc40.s390x.rpm: Already downloaded [SKIPPED] elfutils-libs-0.190-4.fc40.s390x.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-40-0.2.noarch.rpm: Already downloaded [SKIPPED] fedora-release-40-0.29.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-40-0.29.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-40-0.29.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-40-0.2.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-40-0.2.noarch.rpm: Already downloaded [SKIPPED] file-5.45-1.fc40.s390x.rpm: Already downloaded [SKIPPED] file-libs-5.45-1.fc40.s390x.rpm: Already downloaded [SKIPPED] filesystem-3.18-6.fc39.s390x.rpm: Already downloaded [SKIPPED] findutils-4.9.0-6.fc40.s390x.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-12.fc39.noarch.rpm: Already downloaded [SKIPPED] forge-srpm-macros-0.2.0-1.fc40.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-8.fc39.noarch.rpm: Already downloaded [SKIPPED] gawk-5.3.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] gdbm-1.23-4.fc39.s390x.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-4.fc39.s390x.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.6.1-3.fc40.noarch.rpm: Already downloaded [SKIPPED] glibc-2.38.9000-33.fc40.s390x.rpm: Already downloaded [SKIPPED] glibc-common-2.38.9000-33.fc40.s390x.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.38.9000-33.fc40.s390x.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.38.9000-33.fc40.s390x.rpm: Already downloaded [SKIPPED] gmp-6.2.1-5.fc39.s390x.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-6-3.fc39.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.3.1-1.fc40.noarch.rpm: Already downloaded [SKIPPED] grep-3.11-5.fc40.s390x.rpm: Already downloaded [SKIPPED] gzip-1.12-6.fc39.s390x.rpm: Already downloaded [SKIPPED] info-7.1-1.fc40.s390x.rpm: Already downloaded [SKIPPED] jansson-2.13.1-7.fc39.s390x.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-20.fc39.noarch.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.3-1.fc40.s390x.rpm: Already downloaded [SKIPPED] krb5-libs-1.21.2-3.fc40.s390x.rpm: Already downloaded [SKIPPED] libacl-2.3.1-11.fc40.s390x.rpm: Already downloaded [SKIPPED] libarchive-3.7.2-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libattr-2.5.2-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libblkid-2.39.3-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libbrotli-1.1.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libcap-2.69-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.4-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libcom_err-1.47.0-2.fc39.s390x.rpm: Already downloaded [SKIPPED] libcurl-8.5.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libeconf-0.5.2-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libevent-2.1.12-9.fc39.s390x.rpm: Already downloaded [SKIPPED] libfdisk-2.39.3-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libffi-3.4.4-5.fc40.s390x.rpm: Already downloaded [SKIPPED] libgcc-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] libgomp-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] libidn2-2.3.4-3.fc39.s390x.rpm: Already downloaded [SKIPPED] libmount-2.39.3-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libnghttp2-1.59.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-6.fc39.s390x.rpm: Already downloaded [SKIPPED] libpkgconf-1.9.5-2.fc39.s390x.rpm: Already downloaded [SKIPPED] libpsl-0.21.5-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-6.fc39.s390x.rpm: Already downloaded [SKIPPED] libselinux-3.6-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libsemanage-3.6-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libsepol-3.6-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libsmartcols-2.39.3-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libssh-0.10.6-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libssh-config-0.10.6-2.fc40.noarch.rpm: Already downloaded [SKIPPED] libstdc++-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] libtasn1-4.19.0-3.fc39.s390x.rpm: Already downloaded [SKIPPED] libtirpc-1.3.4-1.rc1.fc40.s390x.rpm: Already downloaded [SKIPPED] libunistring-1.1-5.fc40.s390x.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-10.fc39.s390x.rpm: 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.s390x 1/1 Preparing : 1/1 Installing : libgcc-14.0.1-0.2.fc40.s390x 1/152 Running scriptlet: libgcc-14.0.1-0.2.fc40.s390x 1/152 Installing : crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/152 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/152 Installing : fedora-release-identity-basic-40-0.29.noarch 3/152 Installing : fedora-repos-rawhide-40-0.2.noarch 4/152 Installing : fedora-gpg-keys-40-0.2.noarch 5/152 Installing : fedora-repos-40-0.2.noarch 6/152 Installing : fedora-release-common-40-0.29.noarch 7/152 Installing : fedora-release-40-0.29.noarch 8/152 Installing : setup-2.14.5-1.fc40.noarch 9/152 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.5-1.fc40.noarch 9/152 Installing : filesystem-3.18-6.fc39.s390x 10/152 Installing : basesystem-11-18.fc39.noarch 11/152 Installing : rust-srpm-macros-25.2-2.fc40.noarch 12/152 Installing : qt6-srpm-macros-6.6.1-3.fc40.noarch 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authselect-1.5.0-1.fc40.s390x 119/152 Installing : libnsl2-2.0.0-6.fc39.s390x 120/152 Installing : pam-1.5.3-9.fc40.s390x 121/152 Installing : libssh-0.10.6-2.fc40.s390x 122/152 Installing : libarchive-3.7.2-1.fc40.s390x 123/152 Installing : libevent-2.1.12-9.fc39.s390x 124/152 Installing : openldap-2.6.6-1.fc39.s390x 125/152 Installing : libcurl-8.5.0-1.fc40.s390x 126/152 Installing : elfutils-libs-0.190-4.fc40.s390x 127/152 Installing : elfutils-debuginfod-client-0.190-4.fc40.s390x 128/152 Installing : binutils-gold-2.41-30.fc40.s390x 129/152 Running scriptlet: binutils-gold-2.41-30.fc40.s390x 129/152 Installing : binutils-2.41-30.fc40.s390x 130/152 Running scriptlet: binutils-2.41-30.fc40.s390x 130/152 Installing : gdb-minimal-14.1-5.fc40.s390x 131/152 Installing : elfutils-0.190-4.fc40.s390x 132/152 Installing : debugedit-5.0-12.fc40.s390x 133/152 Installing : curl-8.5.0-1.fc40.s390x 134/152 Installing : rpm-sequoia-1.5.0-2.fc40.s390x 135/152 Installing : 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filesystem-3.18-6.fc39.s390x 152/152 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 152/152 Running scriptlet: authselect-libs-1.5.0-1.fc40.s390x 152/152 Running scriptlet: rpm-4.19.1-2.fc40.s390x 152/152 Running scriptlet: info-7.1-1.fc40.s390x 152/152 Installed: alternatives-1.26-1.fc40.s390x ansible-srpm-macros-1-12.fc40.noarch audit-libs-4.0-1.fc40.s390x authselect-1.5.0-1.fc40.s390x authselect-libs-1.5.0-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.26-1.fc40.s390x binutils-2.41-30.fc40.s390x binutils-gold-2.41-30.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-3.fc40.s390x coreutils-common-9.4-3.fc40.s390x cpio-2.14-5.fc40.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-17.fc40.s390x debugedit-5.0-12.fc40.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.20-1.fc40.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.s390x elfutils-debuginfod-client-0.190-4.fc40.s390x elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.s390x elfutils-libs-0.190-4.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.29.noarch fedora-release-common-40-0.29.noarch fedora-release-identity-basic-40-0.29.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-1:4.9.0-6.fc40.s390x fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.3.0-1.fc40.s390x gdb-minimal-14.1-5.fc40.s390x gdbm-1:1.23-4.fc39.s390x gdbm-libs-1:1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-33.fc40.s390x glibc-common-2.38.9000-33.fc40.s390x glibc-gconv-extra-2.38.9000-33.fc40.s390x glibc-minimal-langpack-2.38.9000-33.fc40.s390x gmp-1:6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.s390x krb5-libs-1.21.2-3.fc40.s390x libacl-2.3.1-11.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.2-1.fc40.s390x libblkid-2.39.3-2.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.69-1.fc40.s390x libcap-ng-0.8.4-2.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.5.0-1.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.3-2.fc40.s390x libffi-3.4.4-5.fc40.s390x libgcc-14.0.1-0.2.fc40.s390x libgomp-14.0.1-0.2.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.3-2.fc40.s390x libnghttp2-1.59.0-1.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.5-1.fc40.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.6-2.fc40.s390x libsemanage-3.6-1.fc40.s390x libsepol-3.6-1.fc40.s390x libsmartcols-2.39.3-2.fc40.s390x libssh-0.10.6-2.fc40.s390x libssh-config-0.10.6-2.fc40.noarch libstdc++-14.0.1-0.2.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-1.rc1.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.3-2.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-4.fc40.s390x libxml2-2.12.4-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-9.20240113.fc40.noarch ncurses-libs-6.4-9.20240113.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-1:3.1.4-1.fc40.s390x p11-kit-0.25.3-1.fc40.s390x p11-kit-trust-0.25.3-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.s390x pam-libs-1.5.3-9.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-2.fc40.s390x pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20240107-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-7.fc40.s390x redhat-rpm-config-280-1.fc40.noarch rpm-4.19.1-2.fc40.s390x rpm-build-4.19.1-2.fc40.s390x rpm-build-libs-4.19.1-2.fc40.s390x rpm-libs-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.5-1.fc40.noarch shadow-utils-2:4.14.0-2.fc40.s390x sqlite-libs-3.45.0-1.fc40.s390x systemd-libs-255.2-2.fc40.s390x tar-2:1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.3-2.fc40.s390x util-linux-core-2.39.3-2.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.5-1.fc40.s390x xz-libs-5.4.5-1.fc40.s390x zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.s390x zlib-ng-compat-2.1.6-1.fc40.s390x zstd-1.5.5-4.fc39.s390x Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-1.fc40.s390x ansible-srpm-macros-1-12.fc40.noarch audit-libs-4.0-1.fc40.s390x authselect-1.5.0-1.fc40.s390x authselect-libs-1.5.0-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.26-1.fc40.s390x binutils-2.41-30.fc40.s390x binutils-gold-2.41-30.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-3.fc40.s390x coreutils-common-9.4-3.fc40.s390x cpio-2.14-5.fc40.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-17.fc40.s390x debugedit-5.0-12.fc40.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.20-1.fc40.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.s390x elfutils-debuginfod-client-0.190-4.fc40.s390x elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.s390x elfutils-libs-0.190-4.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.29.noarch fedora-release-common-40-0.29.noarch fedora-release-identity-basic-40-0.29.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-4.9.0-6.fc40.s390x fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.3.0-1.fc40.s390x gdb-minimal-14.1-5.fc40.s390x gdbm-1.23-4.fc39.s390x gdbm-libs-1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-33.fc40.s390x glibc-common-2.38.9000-33.fc40.s390x glibc-gconv-extra-2.38.9000-33.fc40.s390x glibc-minimal-langpack-2.38.9000-33.fc40.s390x gmp-6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.s390x krb5-libs-1.21.2-3.fc40.s390x libacl-2.3.1-11.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.2-1.fc40.s390x libblkid-2.39.3-2.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.69-1.fc40.s390x libcap-ng-0.8.4-2.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.5.0-1.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.3-2.fc40.s390x libffi-3.4.4-5.fc40.s390x libgcc-14.0.1-0.2.fc40.s390x libgomp-14.0.1-0.2.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.3-2.fc40.s390x libnghttp2-1.59.0-1.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.5-1.fc40.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.6-2.fc40.s390x libsemanage-3.6-1.fc40.s390x libsepol-3.6-1.fc40.s390x libsmartcols-2.39.3-2.fc40.s390x libssh-0.10.6-2.fc40.s390x libssh-config-0.10.6-2.fc40.noarch libstdc++-14.0.1-0.2.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-1.rc1.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.3-2.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-4.fc40.s390x libxml2-2.12.4-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-9.20240113.fc40.noarch ncurses-libs-6.4-9.20240113.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-3.1.4-1.fc40.s390x p11-kit-0.25.3-1.fc40.s390x p11-kit-trust-0.25.3-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.s390x pam-libs-1.5.3-9.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-2.fc40.s390x pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20240107-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-7.fc40.s390x redhat-rpm-config-280-1.fc40.noarch rpm-4.19.1-2.fc40.s390x rpm-build-4.19.1-2.fc40.s390x rpm-build-libs-4.19.1-2.fc40.s390x rpm-libs-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.5-1.fc40.noarch shadow-utils-4.14.0-2.fc40.s390x sqlite-libs-3.45.0-1.fc40.s390x systemd-libs-255.2-2.fc40.s390x tar-1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.3-2.fc40.s390x util-linux-core-2.39.3-2.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.5-1.fc40.s390x xz-libs-5.4.5-1.fc40.s390x zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.s390x zlib-ng-compat-2.1.6-1.fc40.s390x zstd-1.5.5-4.fc39.s390x Start: buildsrpm Start: rpmbuild -bs sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ebyd8hdq/COPASI/COPASI.spec) Config(child) 1 minutes 50 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc40.src.rpm) Config(fedora-39-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1705987227.553682/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1705987227.553682/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1705987227.553682/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.s390x rpm-sequoia-1.5.0-1.fc39.s390x python3-dnf-4.18.2-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch yum-4.18.2-1.fc40.noarch Finish: chroot init Start: build phase for COPASI-4.42.284-5.fc40.src.rpm Start: build setup for COPASI-4.42.284-5.fc40.src.rpm sh: line 1: python3-config: command not found sh: line 1: python3-config: command not found Package Qt5Qwt6 was not found in the pkg-config search path. Perhaps you should add the directory containing `Qt5Qwt6.pc' to the PKG_CONFIG_PATH environment variable Package 'Qt5Qwt6', required by 'virtual:world', not found Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1705881600 Wrote: /builddir/build/SRPMS/COPASI-4.42.284-5.fc40.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 50 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 137 kB/s | 3.8 kB 00:00 fedora 735 B/s | 3.8 kB 00:05 updates 979 B/s | 4.8 kB 00:05 Package pkgconf-pkg-config-1.9.5-2.fc39.s390x is already installed. Dependencies resolved. ====================================================================================================================================================== Package Arch Version Repository Size ====================================================================================================================================================== Installing: ImageMagick s390x 1:7.1.1.26-4.fc40 copr_base 78 k bison s390x 3.8.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M bzip2-devel s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214 k cmake s390x 3.27.7-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.8 M cppunit-devel s390x 1.15.1-17.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 57 k crossguid2-devel s390x 0.2.2-15.20190529gitca1bf4b.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k desktop-file-utils s390x 0.26-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 72 k expat-devel s390x 2.5.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k f2c s390x 20210928-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 328 k flex s390x 2.6.4-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 314 k flexiblas-devel s390x 3.4.1-2.fc40 copr_base 108 k freeglut-devel s390x 3.4.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 886 k gcc s390x 14.0.1-0.2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30 M gcc-c++ s390x 14.0.1-0.2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 M libCombine-devel s390x 0.2.20-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55 k libappstream-glib s390x 0.8.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 393 k libcurl-devel s390x 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 924 k libmml-qt5-devel s390x 2.4-18.20210516git7ad58fac.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 10 k libnuml-devel s390x 1.1.4-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51 k libnuml-static s390x 1.1.4-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109 k libsbml-devel s390x 5.20.2-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.6 M libsbw-devel s390x 2.12.2-13.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 58 k libsedml-devel s390x 2:2.0.32-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k libxslt-devel s390x 1.1.39-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125 k mesa-libGL-devel s390x 24.0.0~rc2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k mesa-libGLU-devel s390x 9.0.3-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 12 k minizip-ng-compat-devel s390x 3.0.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26 k python3-devel s390x 3.12.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 274 k python3-setuptools noarch 68.2.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 M qcustomplot-qt5-devel s390x 2.1.1-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 55 k qt5-qtbase-devel s390x 5.15.12-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.2 M qt5-qtdatavis3d-devel s390x 5.15.12-2.fc40 copr_base 74 k qt5-qtwebkit-devel s390x 5.212.0-0.80alpha4.fc40 copr_base 55 k qwt-qt5-devel s390x 6.2.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 125 k qwtplot3d-qt5-devel s390x 1:0.3.0-5.20210828gitb265574.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 130 k raptor-devel s390x 1.4.21-41.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 132 k swig s390x 4.1.1-15.fc40 copr_base 1.5 M zipper-devel 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Summary ====================================================================================================================================================== Install 354 Packages Total size: 248 M Total download size: 127 M Installed size: 927 M Downloading Packages: [SKIPPED] flexiblas-3.4.1-2.fc40.s390x.rpm: Already downloaded [SKIPPED] flexiblas-netlib-3.4.1-2.fc40.s390x.rpm: Already downloaded [SKIPPED] flexiblas-openblas-openmp-3.4.1-2.fc40.s390x.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-14.fc40.s390x.rpm: Already downloaded [SKIPPED] abattis-cantarell-vf-fonts-0.301-10.fc39.noarch.rpm: Already downloaded [SKIPPED] adobe-mappings-cmap-20230622-1.fc39.noarch.rpm: Already downloaded [SKIPPED] adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch.rpm: Already downloaded [SKIPPED] adobe-mappings-pdf-20190401-5.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-docs-12.37-1.fc40.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.37-1.fc40.s390x.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-24.fc39.s390x.rpm: Already downloaded [SKIPPED] cairo-1.18.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] cpp-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] cups-libs-2.4.7-7.fc40.s390x.rpm: Already downloaded [SKIPPED] dbus-libs-1.14.10-1.fc40.s390x.rpm: Already downloaded [SKIPPED] default-fonts-core-sans-4.0-9.fc40.noarch.rpm: Already downloaded [SKIPPED] expat-2.5.0-3.fc39.s390x.rpm: Already downloaded [SKIPPED] fontconfig-2.15.0-1.fc40.s390x.rpm: Already downloaded [SKIPPED] fonts-filesystem-2.0.5-12.fc39.noarch.rpm: Already downloaded [SKIPPED] freetype-2.13.2-1.fc40.s390x.rpm: Already downloaded [SKIPPED] gc-8.2.2-4.fc39.s390x.rpm: Already downloaded [SKIPPED] gcc-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] gcc-c++-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] gcc-plugin-annobin-14.0.1-0.2.fc40.s390x.rpm: Already downloaded [SKIPPED] glib2-2.79.0-6.fc40.s390x.rpm: Already downloaded [SKIPPED] glibc-devel-2.38.9000-33.fc40.s390x.rpm: Already downloaded [SKIPPED] glibc-headers-s390-2.38.9000-33.fc40.noarch.rpm: Already downloaded [SKIPPED] gnutls-3.8.2-2.fc40.s390x.rpm: Already downloaded [SKIPPED] google-droid-sans-fonts-20200215-17.fc40.noarch.rpm: Already downloaded [SKIPPED] google-noto-fonts-common-20230801-4.fc40.noarch.rpm: Already downloaded [SKIPPED] google-noto-sans-vf-fonts-20230801-4.fc40.noarch.rpm: Already downloaded [SKIPPED] groff-base-1.23.0-4.fc40.s390x.rpm: Already downloaded [SKIPPED] guile22-2.2.7-9.fc39.s390x.rpm: Already downloaded [SKIPPED] harfbuzz-8.3.0-2.fc40.s390x.rpm: Already downloaded [SKIPPED] jbig2dec-libs-0.20-1.fc40.s390x.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-27.fc40.s390x.rpm: Already downloaded [SKIPPED] kernel-headers-6.8.0-0.rc1.12.fc40.s390x.rpm: Already downloaded [SKIPPED] lcms2-2.16-2.fc40.s390x.rpm: Already downloaded [SKIPPED] libICE-1.1.1-1.fc40.s390x.rpm: Already downloaded [SKIPPED] libSM-1.2.4-1.fc40.s390x.rpm: 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qwt-qt5-6.2.0-3.fc39.s390x.rpm 13 MB/s | 585 kB 00:00 (329/354): qwtplot3d-qt5-0.3.0-5.20210828gitb26 2.8 MB/s | 103 kB 00:00 (330/354): qwtplot3d-qt5-devel-0.3.0-5.20210828 4.6 MB/s | 130 kB 00:00 (331/354): raptor-devel-1.4.21-41.fc39.s390x.rp 5.8 MB/s | 132 kB 00:00 (332/354): rav1e-libs-0.6.6-4.fc40.s390x.rpm 87 MB/s | 843 kB 00:00 (333/354): raptor-1.4.21-41.fc39.s390x.rpm 6.9 MB/s | 248 kB 00:00 (334/354): rsvg-pixbuf-loader-2.57.1-1.fc40.s39 3.6 MB/s | 16 kB 00:00 (335/354): rhash-1.4.3-3.fc39.s390x.rpm 26 MB/s | 200 kB 00:00 (336/354): shared-mime-info-2.3-2.fc40.s390x.rp 59 MB/s | 389 kB 00:00 (337/354): vim-filesystem-9.1.031-1.fc40.noarch 4.0 MB/s | 17 kB 00:00 (338/354): svt-av1-libs-1.4.1-3.fc39.s390x.rpm 122 MB/s | 1.2 MB 00:00 (339/354): tzdata-2023d-2.fc40.noarch.rpm 46 MB/s | 434 kB 00:00 (340/354): vulkan-loader-devel-1.3.268.0-1.fc40 2.1 MB/s | 11 kB 00:00 (341/354): vulkan-loader-1.3.268.0-1.fc40.s390x 19 MB/s | 158 kB 00:00 (342/354): vulkan-headers-1.3.268.0-1.fc40.noar 84 MB/s | 1.2 MB 00:00 (343/354): woff2-1.0.2-18.fc39.s390x.rpm 9.6 MB/s | 64 kB 00:00 (344/354): xcb-util-0.4.1-3.fc39.s390x.rpm 3.0 MB/s | 19 kB 00:00 (345/354): xcb-util-image-0.4.1-3.fc39.s390x.rp 4.4 MB/s | 20 kB 00:00 (346/354): xcb-util-keysyms-0.4.1-3.fc39.s390x. 4.4 MB/s | 14 kB 00:00 (347/354): xcb-util-wm-0.4.2-3.fc39.s390x.rpm 9.0 MB/s | 32 kB 00:00 (348/354): xcb-util-renderutil-0.3.10-3.fc39.s3 3.2 MB/s | 17 kB 00:00 (349/354): xkeyboard-config-2.40-2.fc40.noarch. 124 MB/s | 917 kB 00:00 (350/354): xz-devel-5.4.5-1.fc40.s390x.rpm 11 MB/s | 62 kB 00:00 (351/354): xorg-x11-proto-devel-2023.2-3.fc40.n 29 MB/s | 263 kB 00:00 (352/354): zlib-ng-compat-devel-2.1.6-1.fc40.s3 8.3 MB/s | 36 kB 00:00 (353/354): zipper-1.0.3-6.fc39.s390x.rpm 3.6 MB/s | 94 kB 00:00 (354/354): zipper-devel-1.0.3-6.fc39.s390x.rpm 1.0 MB/s | 24 kB 00:00 -------------------------------------------------------------------------------- Total 21 MB/s | 127 MB 00:06 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Running transaction test Transaction test succeeded. 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libxslt-devel-1.1.39-1.fc40.s390x 337/354 Installing : libsbw-devel-2.12.2-13.fc39.s390x 338/354 Installing : libappstream-glib-0.8.2-4.fc39.s390x 339/354 Installing : desktop-file-utils-0.26-9.fc39.s390x 340/354 Installing : libCombine-devel-0.2.20-3.fc39.s390x 341/354 Installing : raptor-devel-1.4.21-41.fc39.s390x 342/354 Installing : flexiblas-devel-3.4.1-2.fc40.s390x 343/354 Installing : libsedml-devel-2:2.0.32-7.fc39.s390x 344/354 Installing : bison-3.8.2-6.fc40.s390x 345/354 Installing : flex-2.6.4-14.fc40.s390x 346/354 Installing : libnuml-devel-1.1.4-13.fc40.s390x 347/354 Installing : minizip-ng-compat-devel-3.0.10-5.fc40.s390x 348/354 Installing : zipper-devel-1.0.3-6.fc39.s390x 349/354 Installing : expat-devel-2.5.0-3.fc39.s390x 350/354 Installing : libnuml-static-1.1.4-13.fc40.s390x 351/354 Installing : libcurl-devel-8.5.0-1.fc40.s390x 352/354 Installing : bzip2-devel-1.0.8-16.fc39.s390x 353/354 Installing : swig-4.1.1-15.fc40.s390x 354/354 Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch 354/354 Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch 354/354 Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc 354/354 Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch 354/354 Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 354/354 Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 354/354 Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 354/354 Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch 354/354 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18 354/354 Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch 354/354 Running scriptlet: crypto-policies-scripts-20231204-1.git1e3a2e4.fc 354/354 Running scriptlet: nss-3.96.1-1.fc40.s390x 354/354 Running scriptlet: fontconfig-2.15.0-1.fc40.s390x 354/354 Running scriptlet: swig-4.1.1-15.fc40.s390x 354/354 Installed: ImageMagick-1:7.1.1.26-4.fc40.s390x ImageMagick-libs-1:7.1.1.26-4.fc40.s390x LibRaw-0.21.2-2.fc40.s390x abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch alsa-lib-1.2.10-3.fc40.s390x annobin-docs-12.37-1.fc40.noarch annobin-plugin-gcc-12.37-1.fc40.s390x avahi-libs-0.8-24.fc39.s390x bison-3.8.2-6.fc40.s390x bzip2-devel-1.0.8-16.fc39.s390x cairo-1.18.0-1.fc40.s390x cairo-gobject-1.18.0-1.fc40.s390x cdparanoia-libs-10.2-42.fc39.s390x cmake-3.27.7-1.fc40.s390x cmake-data-3.27.7-1.fc40.noarch cmake-filesystem-3.27.7-1.fc40.s390x cmake-rpm-macros-3.27.7-1.fc40.noarch cpp-14.0.1-0.2.fc40.s390x cppunit-1.15.1-17.fc40.s390x cppunit-devel-1.15.1-17.fc40.s390x crossguid2-0.2.2-15.20190529gitca1bf4b.fc39.s390x crossguid2-devel-0.2.2-15.20190529gitca1bf4b.fc39.s390x crypto-policies-scripts-20231204-1.git1e3a2e4.fc40.noarch cups-libs-1:2.4.7-7.fc40.s390x dbus-libs-1:1.14.10-1.fc40.s390x default-fonts-core-sans-4.0-9.fc40.noarch desktop-file-utils-0.26-9.fc39.s390x double-conversion-3.3.0-1.fc40.s390x duktape-2.7.0-5.fc39.s390x emacs-filesystem-1:29.2-2.fc40.noarch expat-2.5.0-3.fc39.s390x expat-devel-2.5.0-3.fc39.s390x f2c-20210928-6.fc39.s390x f2c-libs-20210928-6.fc39.s390x fftw-libs-double-3.3.10-10.fc40.s390x flex-2.6.4-14.fc40.s390x flexiblas-3.4.1-2.fc40.s390x flexiblas-devel-3.4.1-2.fc40.s390x flexiblas-netlib-3.4.1-2.fc40.s390x flexiblas-netlib64-3.4.1-2.fc40.s390x flexiblas-openblas-openmp-3.4.1-2.fc40.s390x flexiblas-openblas-openmp64-3.4.1-2.fc40.s390x fontconfig-2.15.0-1.fc40.s390x fonts-filesystem-1:2.0.5-12.fc39.noarch freeglut-3.4.0-4.fc39.s390x freeglut-devel-3.4.0-4.fc39.s390x freetype-2.13.2-1.fc40.s390x fribidi-1.0.13-2.fc39.s390x gc-8.2.2-4.fc39.s390x gcc-14.0.1-0.2.fc40.s390x gcc-c++-14.0.1-0.2.fc40.s390x gcc-plugin-annobin-14.0.1-0.2.fc40.s390x gd-2.3.3-12.fc39.s390x gdk-pixbuf2-2.42.10-6.fc40.s390x 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lcms2-2.16-2.fc40.s390x libCombine-0.2.20-3.fc39.s390x libCombine-devel-0.2.20-3.fc39.s390x libICE-1.1.1-1.fc40.s390x libSM-1.2.4-1.fc40.s390x libX11-1.8.7-1.fc40.s390x libX11-common-1.8.7-1.fc40.noarch libX11-devel-1.8.7-1.fc40.s390x libX11-xcb-1.8.7-1.fc40.s390x libXau-1.0.11-4.fc40.s390x libXau-devel-1.0.11-4.fc40.s390x libXext-1.3.5-5.fc40.s390x libXfixes-6.0.1-1.fc40.s390x libXft-2.3.8-4.fc40.s390x libXi-1.8.1-3.fc40.s390x libXpm-3.5.17-1.fc40.s390x libXrender-0.9.11-4.fc40.s390x libXt-1.3.0-1.fc40.s390x libXv-1.0.12-1.fc40.s390x libXxf86vm-1.1.5-4.fc40.s390x libaom-3.8.0-1.fc40.s390x libappstream-glib-0.8.2-4.fc39.s390x libasan-14.0.1-0.2.fc40.s390x libatomic-14.0.1-0.2.fc40.s390x libavif-0.11.1-12.fc40.s390x libb2-0.98.1-9.fc39.s390x libcurl-devel-8.5.0-1.fc40.s390x libdatrie-0.2.13-7.fc39.s390x libdav1d-1.3.0-1.fc40.s390x libdrm-2.4.120-1.fc40.s390x libdrm-devel-2.4.120-1.fc40.s390x libevdev-1.13.1-2.fc39.s390x libgfortran-14.0.1-0.2.fc40.s390x libglvnd-1:1.7.0-1.fc40.s390x libglvnd-core-devel-1:1.7.0-1.fc40.s390x libglvnd-devel-1:1.7.0-1.fc40.s390x libglvnd-egl-1:1.7.0-1.fc40.s390x libglvnd-gles-1:1.7.0-1.fc40.s390x libglvnd-glx-1:1.7.0-1.fc40.s390x libglvnd-opengl-1:1.7.0-1.fc40.s390x libgpg-error-1.47-2.fc39.s390x libgpg-error-devel-1.47-2.fc39.s390x libgs-10.02.1-7.fc40.s390x libgudev-238-2.fc39.s390x libheif-1.17.5-2.fc40.s390x libicu-73.2-3.fc40.s390x libijs-0.35-20.fc40.s390x libimagequant-4.0.3-2.fc40.s390x libinput-1.25.0-1.fc40.s390x libjpeg-turbo-2.1.4-3.fc39.s390x libjxl-1:0.8.2-3.fc40.s390x liblerc-4.0.0-4.fc39.s390x liblqr-1-0.4.2-22.fc39.s390x libmml-qt5-2.4-18.20210516git7ad58fac.fc39.s390x libmml-qt5-devel-2.4-18.20210516git7ad58fac.fc39.s390x libmpc-1.3.1-3.fc39.s390x libnuml-1.1.4-13.fc40.s390x libnuml-devel-1.1.4-13.fc40.s390x libnuml-static-1.1.4-13.fc40.s390x libogg-2:1.3.5-6.fc39.s390x libpaper-1:2.1.1-1.fc39.s390x libpng-2:1.6.40-1.fc40.s390x libproxy-0.5.3-3.fc40.s390x libraqm-0.8.0-5.fc39.s390x librsvg2-2.57.1-1.fc40.s390x libsbml-5.20.2-5.fc40.s390x libsbml-devel-5.20.2-5.fc40.s390x libsbw-2.12.2-13.fc39.s390x libsbw-devel-2.12.2-13.fc39.s390x libsedml-2:2.0.32-7.fc39.s390x libsedml-devel-2:2.0.32-7.fc39.s390x libstdc++-devel-14.0.1-0.2.fc40.s390x libstemmer-2.2.0-7.fc39.s390x libthai-0.1.29-6.fc39.s390x libtheora-1:1.1.1-34.fc39.s390x libtiff-4.5.0-3.fc40.s390x libtool-ltdl-2.4.7-9.fc40.s390x libubsan-14.0.1-0.2.fc40.s390x libunwind-1.7.2-1.fc40.s390x libuuid-devel-2.39.3-2.fc40.s390x libuv-1:1.47.0-3.fc40.s390x libvisual-1:0.4.1-2.fc39.s390x libvorbis-1:1.3.7-8.fc39.s390x libwacom-2.9.0-1.fc40.s390x libwacom-data-2.9.0-1.fc40.noarch libwayland-client-1.22.0-2.fc39.s390x libwayland-cursor-1.22.0-2.fc39.s390x libwayland-egl-1.22.0-2.fc39.s390x libwayland-server-1.22.0-2.fc39.s390x libwebp-1.3.2-2.fc40.s390x libwmf-lite-0.2.13-2.fc39.s390x libxcb-1.16-2.fc40.s390x libxcb-devel-1.16-2.fc40.s390x libxcrypt-devel-4.4.36-4.fc40.s390x libxkbcommon-1.6.0-1.fc40.s390x libxkbcommon-x11-1.6.0-1.fc40.s390x libxml2-devel-2.12.4-1.fc40.s390x libxshmfence-1.3.2-1.fc40.s390x libxslt-1.1.39-1.fc40.s390x libxslt-devel-1.1.39-1.fc40.s390x libzip-1.10.1-1.fc40.s390x m4-1.4.19-7.fc40.s390x make-1:4.4.1-2.fc39.s390x mesa-libEGL-24.0.0~rc2-2.fc40.s390x mesa-libEGL-devel-24.0.0~rc2-2.fc40.s390x mesa-libGL-24.0.0~rc2-2.fc40.s390x mesa-libGL-devel-24.0.0~rc2-2.fc40.s390x mesa-libGLU-9.0.3-1.fc39.s390x mesa-libGLU-devel-9.0.3-1.fc39.s390x mesa-libgbm-24.0.0~rc2-2.fc40.s390x mesa-libglapi-24.0.0~rc2-2.fc40.s390x minizip-ng-compat-3.0.10-5.fc40.s390x minizip-ng-compat-devel-3.0.10-5.fc40.s390x mpdecimal-2.5.1-7.fc39.s390x mtdev-1.1.6-6.fc39.s390x ncurses-6.4-9.20240113.fc40.s390x netpbm-11.02.00-5.fc40.s390x nettle-3.9.1-2.fc39.s390x nspr-4.35.0-17.fc40.s390x nss-3.96.1-1.fc40.s390x nss-softokn-3.96.1-1.fc40.s390x nss-softokn-freebl-3.96.1-1.fc40.s390x nss-sysinit-3.96.1-1.fc40.s390x nss-util-3.96.1-1.fc40.s390x openblas-0.3.26-1.fc40.s390x openblas-openmp-0.3.26-1.fc40.s390x openblas-openmp64-0.3.26-1.fc40.s390x openexr-libs-3.1.10-3.fc40.s390x openjpeg2-2.5.0-5.fc40.s390x opus-1.4-1.fc40.s390x orc-0.4.33-3.fc39.s390x pango-1.51.0-1.fc40.s390x pcre2-utf16-10.42-2.fc40.s390x perl-AutoLoader-5.74-504.fc40.noarch perl-B-1.88-504.fc40.s390x perl-Carp-1.54-500.fc39.noarch perl-Class-Struct-0.68-504.fc40.noarch perl-Data-Dumper-2.188-501.fc39.s390x perl-Digest-1.20-500.fc39.noarch perl-Digest-MD5-2.59-1.fc40.s390x perl-DynaLoader-1.54-504.fc40.s390x perl-Encode-4:3.20-501.fc40.s390x perl-English-1.11-504.fc40.noarch perl-Errno-1.37-504.fc40.s390x perl-Exporter-5.78-1.fc40.noarch perl-Fcntl-1.15-504.fc40.s390x perl-File-Basename-2.86-504.fc40.noarch perl-File-Find-1.43-504.fc40.noarch perl-File-Path-2.18-501.fc40.noarch perl-File-Temp-1:0.231.100-501.fc40.noarch perl-File-stat-1.13-504.fc40.noarch perl-FileHandle-2.05-504.fc40.noarch perl-Getopt-Long-1:2.57-1.fc40.noarch perl-Getopt-Std-1.13-504.fc40.noarch perl-HTTP-Tiny-0.088-3.fc39.noarch perl-IO-1.52-504.fc40.s390x perl-IO-Socket-IP-0.42-1.fc39.noarch perl-IO-Socket-SSL-2.084-1.fc40.noarch perl-IPC-Open3-1.22-504.fc40.noarch perl-MIME-Base64-3.16-501.fc40.s390x perl-Mozilla-CA-20231213-1.fc40.noarch perl-Net-SSLeay-1.94-1.fc40.s390x perl-POSIX-2.13-504.fc40.s390x perl-PathTools-3.89-500.fc39.s390x perl-Pod-Escapes-1:1.07-501.fc40.noarch perl-Pod-Perldoc-3.28.01-501.fc39.noarch perl-Pod-Simple-1:3.45-4.fc39.noarch perl-Pod-Usage-4:2.03-500.fc39.noarch perl-Scalar-List-Utils-5:1.63-500.fc39.s390x perl-SelectSaver-1.02-504.fc40.noarch perl-Socket-4:2.037-3.fc39.s390x perl-Storable-1:3.32-500.fc39.s390x perl-Symbol-1.09-504.fc40.noarch perl-Term-ANSIColor-5.01-502.fc40.noarch perl-Term-Cap-1.18-500.fc39.noarch perl-Text-ParseWords-3.31-500.fc39.noarch perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch perl-Time-Local-2:1.350-3.fc39.noarch perl-URI-5.21-1.fc40.noarch perl-base-2.27-504.fc40.noarch perl-constant-1.33-501.fc39.noarch perl-if-0.61.000-504.fc40.noarch perl-interpreter-4:5.38.2-504.fc40.s390x perl-libnet-3.15-501.fc39.noarch perl-libs-4:5.38.2-504.fc40.s390x perl-locale-1.10-504.fc40.noarch perl-mro-1.28-504.fc40.s390x perl-overload-1.37-504.fc40.noarch perl-overloading-0.02-504.fc40.noarch perl-parent-1:0.241-500.fc39.noarch perl-podlators-1:5.01-500.fc39.noarch perl-vars-1.05-504.fc40.noarch pixman-0.43.0-1.fc40.s390x poppler-23.08.0-2.fc40.s390x poppler-data-0.4.11-5.fc39.noarch poppler-glib-23.08.0-2.fc40.s390x pyproject-rpm-macros-1.11.0-1.fc40.noarch python-pip-wheel-23.3.1-3.fc40.noarch python-rpm-macros-3.12-5.fc40.noarch python3-3.12.1-2.fc40.s390x python3-devel-3.12.1-2.fc40.s390x python3-libs-3.12.1-2.fc40.s390x python3-packaging-23.2-2.fc40.noarch python3-rpm-generators-14-8.fc40.noarch python3-rpm-macros-3.12-5.fc40.noarch python3-setuptools-68.2.2-1.fc40.noarch qcustomplot-qt5-2.1.1-7.fc40.s390x qcustomplot-qt5-devel-2.1.1-7.fc40.s390x qt-settings-39.1-3.fc40.noarch qt5-qtbase-5.15.12-1.fc40.s390x qt5-qtbase-common-5.15.12-1.fc40.noarch qt5-qtbase-devel-5.15.12-1.fc40.s390x qt5-qtbase-gui-5.15.12-1.fc40.s390x qt5-qtdatavis3d-5.15.12-2.fc40.s390x qt5-qtdatavis3d-devel-5.15.12-2.fc40.s390x qt5-qtdeclarative-5.15.12-1.fc40.s390x qt5-qtdeclarative-devel-5.15.12-1.fc40.s390x qt5-qtlocation-5.15.12-1.fc40.s390x qt5-qtsensors-5.15.12-2.fc40.s390x qt5-qtsvg-5.15.12-1.fc40.s390x qt5-qtsvg-devel-5.15.12-1.fc40.s390x qt5-qtwebchannel-5.15.12-2.fc40.s390x qt5-qtwebkit-5.212.0-0.80alpha4.fc40.s390x qt5-qtwebkit-devel-5.212.0-0.80alpha4.fc40.s390x qt5-rpm-macros-5.15.12-1.fc40.noarch qwt-qt5-6.2.0-3.fc39.s390x qwt-qt5-devel-6.2.0-3.fc39.s390x qwtplot3d-qt5-1:0.3.0-5.20210828gitb265574.fc39.s390x qwtplot3d-qt5-devel-1:0.3.0-5.20210828gitb265574.fc39.s390x raptor-1.4.21-41.fc39.s390x raptor-devel-1.4.21-41.fc39.s390x rav1e-libs-0.6.6-4.fc40.s390x rhash-1.4.3-3.fc39.s390x rsvg-pixbuf-loader-2.57.1-1.fc40.s390x shared-mime-info-2.3-2.fc40.s390x svt-av1-libs-1.4.1-3.fc39.s390x swig-4.1.1-15.fc40.s390x tzdata-2023d-2.fc40.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.1.031-1.fc40.noarch vulkan-headers-1.3.268.0-1.fc40.noarch vulkan-loader-1.3.268.0-1.fc40.s390x vulkan-loader-devel-1.3.268.0-1.fc40.s390x woff2-1.0.2-18.fc39.s390x xcb-util-0.4.1-3.fc39.s390x xcb-util-image-0.4.1-3.fc39.s390x xcb-util-keysyms-0.4.1-3.fc39.s390x xcb-util-renderutil-0.3.10-3.fc39.s390x xcb-util-wm-0.4.2-3.fc39.s390x xkeyboard-config-2.40-2.fc40.noarch xml-common-0.6.3-62.fc40.noarch xorg-x11-proto-devel-2023.2-3.fc40.noarch xz-devel-5.4.5-1.fc40.s390x zipper-1.0.3-6.fc39.s390x zipper-devel-1.0.3-6.fc39.s390x zlib-ng-compat-devel-2.1.6-1.fc40.s390x Complete! Finish: build setup for COPASI-4.42.284-5.fc40.src.rpm Start: rpmbuild COPASI-4.42.284-5.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1705881600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.kcIPKC + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf COPASI-Build-284 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/COPASI-Build-284.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd COPASI-Build-284 + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + rm -f license.txt ++ find copasi -type f '(' -name '*.cpp' ')' + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + touch -r copasi/xml/parser/UnsupportedAnnotationHandler.cpp copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new + mv copasi/xml/parser/UnsupportedAnnotationHandler.cpp.new copasi/xml/parser/UnsupportedAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + touch -r copasi/xml/parser/UnitDefinitionHandler.cpp copasi/xml/parser/UnitDefinitionHandler.cpp.new + mv copasi/xml/parser/UnitDefinitionHandler.cpp.new copasi/xml/parser/UnitDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + touch -r copasi/xml/parser/UNKNOWNHandler.cpp copasi/xml/parser/UNKNOWNHandler.cpp.new + mv copasi/xml/parser/UNKNOWNHandler.cpp.new copasi/xml/parser/UNKNOWNHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + touch -r copasi/xml/parser/TextGlyphHandler.cpp copasi/xml/parser/TextGlyphHandler.cpp.new + mv copasi/xml/parser/TextGlyphHandler.cpp.new copasi/xml/parser/TextGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + touch -r copasi/xml/parser/TaskHandler.cpp copasi/xml/parser/TaskHandler.cpp.new + mv copasi/xml/parser/TaskHandler.cpp.new copasi/xml/parser/TaskHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + touch -r copasi/xml/parser/TableHandler.cpp copasi/xml/parser/TableHandler.cpp.new + mv copasi/xml/parser/TableHandler.cpp.new copasi/xml/parser/TableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + touch -r copasi/xml/parser/SubstrateHandler.cpp copasi/xml/parser/SubstrateHandler.cpp.new + mv copasi/xml/parser/SubstrateHandler.cpp.new copasi/xml/parser/SubstrateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + touch -r copasi/xml/parser/StyleHandler.cpp copasi/xml/parser/StyleHandler.cpp.new + mv copasi/xml/parser/StyleHandler.cpp.new copasi/xml/parser/StyleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + touch -r copasi/xml/parser/StateTemplateVariableHandler.cpp copasi/xml/parser/StateTemplateVariableHandler.cpp.new + mv copasi/xml/parser/StateTemplateVariableHandler.cpp.new copasi/xml/parser/StateTemplateVariableHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + touch -r copasi/xml/parser/StateTemplateHandler.cpp copasi/xml/parser/StateTemplateHandler.cpp.new + mv copasi/xml/parser/StateTemplateHandler.cpp.new copasi/xml/parser/StateTemplateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + touch -r copasi/xml/parser/SourceParameterHandler.cpp copasi/xml/parser/SourceParameterHandler.cpp.new + mv copasi/xml/parser/SourceParameterHandler.cpp.new copasi/xml/parser/SourceParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + touch -r copasi/xml/parser/SliderHandler.cpp copasi/xml/parser/SliderHandler.cpp.new + mv copasi/xml/parser/SliderHandler.cpp.new copasi/xml/parser/SliderHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + touch -r copasi/xml/parser/SBMLMapHandler.cpp copasi/xml/parser/SBMLMapHandler.cpp.new + mv copasi/xml/parser/SBMLMapHandler.cpp.new copasi/xml/parser/SBMLMapHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + touch -r copasi/xml/parser/ReportTargetHandler.cpp copasi/xml/parser/ReportTargetHandler.cpp.new + mv copasi/xml/parser/ReportTargetHandler.cpp.new copasi/xml/parser/ReportTargetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + touch -r copasi/xml/parser/ReportSectionHandler.cpp copasi/xml/parser/ReportSectionHandler.cpp.new + mv copasi/xml/parser/ReportSectionHandler.cpp.new copasi/xml/parser/ReportSectionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + touch -r copasi/xml/parser/ReportDefinitionHandler.cpp copasi/xml/parser/ReportDefinitionHandler.cpp.new + mv copasi/xml/parser/ReportDefinitionHandler.cpp.new copasi/xml/parser/ReportDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + touch -r copasi/xml/parser/RenderTextHandler.cpp copasi/xml/parser/RenderTextHandler.cpp.new + mv copasi/xml/parser/RenderTextHandler.cpp.new copasi/xml/parser/RenderTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + touch -r copasi/xml/parser/RenderInformationHandler.cpp copasi/xml/parser/RenderInformationHandler.cpp.new + mv copasi/xml/parser/RenderInformationHandler.cpp.new copasi/xml/parser/RenderInformationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + touch -r copasi/xml/parser/RenderCurveHandler.cpp copasi/xml/parser/RenderCurveHandler.cpp.new + mv copasi/xml/parser/RenderCurveHandler.cpp.new copasi/xml/parser/RenderCurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + touch -r copasi/xml/parser/RenderCurveElementHandler.cpp copasi/xml/parser/RenderCurveElementHandler.cpp.new + mv copasi/xml/parser/RenderCurveElementHandler.cpp.new copasi/xml/parser/RenderCurveElementHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + touch -r copasi/xml/parser/RectangleHandler.cpp copasi/xml/parser/RectangleHandler.cpp.new + mv copasi/xml/parser/RectangleHandler.cpp.new copasi/xml/parser/RectangleHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + touch -r copasi/xml/parser/ReactionHandler.cpp copasi/xml/parser/ReactionHandler.cpp.new + mv copasi/xml/parser/ReactionHandler.cpp.new copasi/xml/parser/ReactionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + touch -r copasi/xml/parser/ReactionGlyphHandler.cpp copasi/xml/parser/ReactionGlyphHandler.cpp.new + mv copasi/xml/parser/ReactionGlyphHandler.cpp.new copasi/xml/parser/ReactionGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + touch -r copasi/xml/parser/RadialGradientHandler.cpp copasi/xml/parser/RadialGradientHandler.cpp.new + mv copasi/xml/parser/RadialGradientHandler.cpp.new copasi/xml/parser/RadialGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + touch -r copasi/xml/parser/ProductHandler.cpp copasi/xml/parser/ProductHandler.cpp.new + mv copasi/xml/parser/ProductHandler.cpp.new copasi/xml/parser/ProductHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + touch -r copasi/xml/parser/PolygonHandler.cpp copasi/xml/parser/PolygonHandler.cpp.new + mv copasi/xml/parser/PolygonHandler.cpp.new copasi/xml/parser/PolygonHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + touch -r copasi/xml/parser/PointHandler.cpp copasi/xml/parser/PointHandler.cpp.new + mv copasi/xml/parser/PointHandler.cpp.new copasi/xml/parser/PointHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + touch -r copasi/xml/parser/PlotSpecificationHandler.cpp copasi/xml/parser/PlotSpecificationHandler.cpp.new + mv copasi/xml/parser/PlotSpecificationHandler.cpp.new copasi/xml/parser/PlotSpecificationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + touch -r copasi/xml/parser/PlotItemHandler.cpp copasi/xml/parser/PlotItemHandler.cpp.new + mv copasi/xml/parser/PlotItemHandler.cpp.new copasi/xml/parser/PlotItemHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + touch -r copasi/xml/parser/ParameterTextHandler.cpp copasi/xml/parser/ParameterTextHandler.cpp.new + mv copasi/xml/parser/ParameterTextHandler.cpp.new copasi/xml/parser/ParameterTextHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + touch -r copasi/xml/parser/ParameterHandler.cpp copasi/xml/parser/ParameterHandler.cpp.new + mv copasi/xml/parser/ParameterHandler.cpp.new copasi/xml/parser/ParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + touch -r copasi/xml/parser/ParameterGroupHandler.cpp copasi/xml/parser/ParameterGroupHandler.cpp.new + mv copasi/xml/parser/ParameterGroupHandler.cpp.new copasi/xml/parser/ParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + touch -r copasi/xml/parser/ParameterDescriptionHandler.cpp copasi/xml/parser/ParameterDescriptionHandler.cpp.new + mv copasi/xml/parser/ParameterDescriptionHandler.cpp.new copasi/xml/parser/ParameterDescriptionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + touch -r copasi/xml/parser/ObjectHandler.cpp copasi/xml/parser/ObjectHandler.cpp.new + mv copasi/xml/parser/ObjectHandler.cpp.new copasi/xml/parser/ObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + touch -r copasi/xml/parser/ModifierHandler.cpp copasi/xml/parser/ModifierHandler.cpp.new + mv copasi/xml/parser/ModifierHandler.cpp.new copasi/xml/parser/ModifierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + touch -r copasi/xml/parser/ModelValueHandler.cpp copasi/xml/parser/ModelValueHandler.cpp.new + mv copasi/xml/parser/ModelValueHandler.cpp.new copasi/xml/parser/ModelValueHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + touch -r copasi/xml/parser/ModelParameterSetHandler.cpp copasi/xml/parser/ModelParameterSetHandler.cpp.new + mv copasi/xml/parser/ModelParameterSetHandler.cpp.new copasi/xml/parser/ModelParameterSetHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + touch -r copasi/xml/parser/ModelParameterHandler.cpp copasi/xml/parser/ModelParameterHandler.cpp.new + mv copasi/xml/parser/ModelParameterHandler.cpp.new copasi/xml/parser/ModelParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + touch -r copasi/xml/parser/ModelParameterGroupHandler.cpp copasi/xml/parser/ModelParameterGroupHandler.cpp.new + mv copasi/xml/parser/ModelParameterGroupHandler.cpp.new copasi/xml/parser/ModelParameterGroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + touch -r copasi/xml/parser/ModelHandler.cpp copasi/xml/parser/ModelHandler.cpp.new + mv copasi/xml/parser/ModelHandler.cpp.new copasi/xml/parser/ModelHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + touch -r copasi/xml/parser/MiriamAnnotationHandler.cpp copasi/xml/parser/MiriamAnnotationHandler.cpp.new + mv copasi/xml/parser/MiriamAnnotationHandler.cpp.new copasi/xml/parser/MiriamAnnotationHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + touch -r copasi/xml/parser/MethodHandler.cpp copasi/xml/parser/MethodHandler.cpp.new + mv copasi/xml/parser/MethodHandler.cpp.new copasi/xml/parser/MethodHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp.new copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + touch -r copasi/xml/parser/MetaboliteHandler.cpp copasi/xml/parser/MetaboliteHandler.cpp.new + mv copasi/xml/parser/MetaboliteHandler.cpp.new copasi/xml/parser/MetaboliteHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + touch -r copasi/xml/parser/MetaboliteGlyphHandler.cpp copasi/xml/parser/MetaboliteGlyphHandler.cpp.new + mv copasi/xml/parser/MetaboliteGlyphHandler.cpp.new copasi/xml/parser/MetaboliteGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + touch -r copasi/xml/parser/MathMLHandler.cpp copasi/xml/parser/MathMLHandler.cpp.new + mv copasi/xml/parser/MathMLHandler.cpp.new copasi/xml/parser/MathMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + touch -r copasi/xml/parser/ListOfLayoutsHandler.cpp copasi/xml/parser/ListOfLayoutsHandler.cpp.new + mv copasi/xml/parser/ListOfLayoutsHandler.cpp.new copasi/xml/parser/ListOfLayoutsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + touch -r copasi/xml/parser/ListOfHandler.cpp copasi/xml/parser/ListOfHandler.cpp.new + mv copasi/xml/parser/ListOfHandler.cpp.new copasi/xml/parser/ListOfHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + touch -r copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new + mv copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp.new copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + touch -r copasi/xml/parser/ListOfCurveSegmentsHandler.cpp copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new + mv copasi/xml/parser/ListOfCurveSegmentsHandler.cpp.new copasi/xml/parser/ListOfCurveSegmentsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + touch -r copasi/xml/parser/LinearGradientHandler.cpp copasi/xml/parser/LinearGradientHandler.cpp.new + mv copasi/xml/parser/LinearGradientHandler.cpp.new copasi/xml/parser/LinearGradientHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + touch -r copasi/xml/parser/LineSegmentHandler.cpp copasi/xml/parser/LineSegmentHandler.cpp.new + mv copasi/xml/parser/LineSegmentHandler.cpp.new copasi/xml/parser/LineSegmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + touch -r copasi/xml/parser/LineEndingHandler.cpp copasi/xml/parser/LineEndingHandler.cpp.new + mv copasi/xml/parser/LineEndingHandler.cpp.new copasi/xml/parser/LineEndingHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + touch -r copasi/xml/parser/LayoutHandler.cpp copasi/xml/parser/LayoutHandler.cpp.new + mv copasi/xml/parser/LayoutHandler.cpp.new copasi/xml/parser/LayoutHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + touch -r copasi/xml/parser/KineticLawHandler.cpp copasi/xml/parser/KineticLawHandler.cpp.new + mv copasi/xml/parser/KineticLawHandler.cpp.new copasi/xml/parser/KineticLawHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + touch -r copasi/xml/parser/InitialStateHandler.cpp copasi/xml/parser/InitialStateHandler.cpp.new + mv copasi/xml/parser/InitialStateHandler.cpp.new copasi/xml/parser/InitialStateHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + touch -r copasi/xml/parser/ImageHandler.cpp copasi/xml/parser/ImageHandler.cpp.new + mv copasi/xml/parser/ImageHandler.cpp.new copasi/xml/parser/ImageHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + touch -r copasi/xml/parser/GroupHandler.cpp copasi/xml/parser/GroupHandler.cpp.new + mv copasi/xml/parser/GroupHandler.cpp.new copasi/xml/parser/GroupHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + touch -r copasi/xml/parser/GradientStopHandler.cpp copasi/xml/parser/GradientStopHandler.cpp.new + mv copasi/xml/parser/GradientStopHandler.cpp.new copasi/xml/parser/GradientStopHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + touch -r copasi/xml/parser/GUIHandler.cpp copasi/xml/parser/GUIHandler.cpp.new + mv copasi/xml/parser/GUIHandler.cpp.new copasi/xml/parser/GUIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + touch -r copasi/xml/parser/FunctionHandler.cpp copasi/xml/parser/FunctionHandler.cpp.new + mv copasi/xml/parser/FunctionHandler.cpp.new copasi/xml/parser/FunctionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + touch -r copasi/xml/parser/EventHandler.cpp copasi/xml/parser/EventHandler.cpp.new + mv copasi/xml/parser/EventHandler.cpp.new copasi/xml/parser/EventHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + touch -r copasi/xml/parser/EllipseHandler.cpp copasi/xml/parser/EllipseHandler.cpp.new + mv copasi/xml/parser/EllipseHandler.cpp.new copasi/xml/parser/EllipseHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + touch -r copasi/xml/parser/DimensionsHandler.cpp copasi/xml/parser/DimensionsHandler.cpp.new + mv copasi/xml/parser/DimensionsHandler.cpp.new copasi/xml/parser/DimensionsHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + touch -r copasi/xml/parser/CurveHandler.cpp copasi/xml/parser/CurveHandler.cpp.new + mv copasi/xml/parser/CurveHandler.cpp.new copasi/xml/parser/CurveHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + touch -r copasi/xml/parser/CubicBezierHandler.cpp copasi/xml/parser/CubicBezierHandler.cpp.new + mv copasi/xml/parser/CubicBezierHandler.cpp.new copasi/xml/parser/CubicBezierHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + touch -r copasi/xml/parser/ConstantHandler.cpp copasi/xml/parser/ConstantHandler.cpp.new + mv copasi/xml/parser/ConstantHandler.cpp.new copasi/xml/parser/ConstantHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + touch -r copasi/xml/parser/CompartmentHandler.cpp copasi/xml/parser/CompartmentHandler.cpp.new + mv copasi/xml/parser/CompartmentHandler.cpp.new copasi/xml/parser/CompartmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + touch -r copasi/xml/parser/CompartmentGlyphHandler.cpp copasi/xml/parser/CompartmentGlyphHandler.cpp.new + mv copasi/xml/parser/CompartmentGlyphHandler.cpp.new copasi/xml/parser/CompartmentGlyphHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + touch -r copasi/xml/parser/CommentHandler.cpp copasi/xml/parser/CommentHandler.cpp.new + mv copasi/xml/parser/CommentHandler.cpp.new copasi/xml/parser/CommentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + touch -r copasi/xml/parser/ColorDefinitionHandler.cpp copasi/xml/parser/ColorDefinitionHandler.cpp.new + mv copasi/xml/parser/ColorDefinitionHandler.cpp.new copasi/xml/parser/ColorDefinitionHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + touch -r copasi/xml/parser/CharacterDataHandler.cpp copasi/xml/parser/CharacterDataHandler.cpp.new + mv copasi/xml/parser/CharacterDataHandler.cpp.new copasi/xml/parser/CharacterDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + touch -r copasi/xml/parser/ChannelSpecHandler.cpp copasi/xml/parser/ChannelSpecHandler.cpp.new + mv copasi/xml/parser/ChannelSpecHandler.cpp.new copasi/xml/parser/ChannelSpecHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + touch -r copasi/xml/parser/CallParameterHandler.cpp copasi/xml/parser/CallParameterHandler.cpp.new + mv copasi/xml/parser/CallParameterHandler.cpp.new copasi/xml/parser/CallParameterHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + touch -r copasi/xml/parser/CXMLParserData.cpp copasi/xml/parser/CXMLParserData.cpp.new + mv copasi/xml/parser/CXMLParserData.cpp.new copasi/xml/parser/CXMLParserData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + touch -r copasi/xml/parser/CXMLParser.cpp copasi/xml/parser/CXMLParser.cpp.new + mv copasi/xml/parser/CXMLParser.cpp.new copasi/xml/parser/CXMLParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + touch -r copasi/xml/parser/CXMLHandlerFactory.cpp copasi/xml/parser/CXMLHandlerFactory.cpp.new + mv copasi/xml/parser/CXMLHandlerFactory.cpp.new copasi/xml/parser/CXMLHandlerFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + touch -r copasi/xml/parser/CXMLHandler.cpp copasi/xml/parser/CXMLHandler.cpp.new + mv copasi/xml/parser/CXMLHandler.cpp.new copasi/xml/parser/CXMLHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + touch -r copasi/xml/parser/COPASIHandler.cpp copasi/xml/parser/COPASIHandler.cpp.new + mv copasi/xml/parser/COPASIHandler.cpp.new copasi/xml/parser/COPASIHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + touch -r copasi/xml/parser/BoundingBoxHandler.cpp copasi/xml/parser/BoundingBoxHandler.cpp.new + mv copasi/xml/parser/BoundingBoxHandler.cpp.new copasi/xml/parser/BoundingBoxHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + touch -r copasi/xml/parser/AssignmentHandler.cpp copasi/xml/parser/AssignmentHandler.cpp.new + mv copasi/xml/parser/AssignmentHandler.cpp.new copasi/xml/parser/AssignmentHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + touch -r copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new + mv copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp.new copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + touch -r copasi/xml/CFixLocalReactionParameters.cpp copasi/xml/CFixLocalReactionParameters.cpp.new + mv copasi/xml/CFixLocalReactionParameters.cpp.new copasi/xml/CFixLocalReactionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + touch -r copasi/xml/CExpat.cpp copasi/xml/CExpat.cpp.new + mv copasi/xml/CExpat.cpp.new copasi/xml/CExpat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + touch -r copasi/xml/CCopasiXMLInterface.cpp copasi/xml/CCopasiXMLInterface.cpp.new + mv copasi/xml/CCopasiXMLInterface.cpp.new copasi/xml/CCopasiXMLInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + touch -r copasi/xml/CCopasiXML.cpp copasi/xml/CCopasiXML.cpp.new + mv copasi/xml/CCopasiXML.cpp.new copasi/xml/CCopasiXML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + touch -r copasi/wizard/wizard.cpp copasi/wizard/wizard.cpp.new + mv copasi/wizard/wizard.cpp.new copasi/wizard/wizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + touch -r copasi/versioningUI/CQModelVersionHierarchyDM.cpp copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new + mv copasi/versioningUI/CQModelVersionHierarchyDM.cpp.new copasi/versioningUI/CQModelVersionHierarchyDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + touch -r copasi/versioningUI/CCreateModelVersionDialog.cpp copasi/versioningUI/CCreateModelVersionDialog.cpp.new + mv copasi/versioningUI/CCreateModelVersionDialog.cpp.new copasi/versioningUI/CCreateModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + touch -r copasi/versioningUI/CBrowseModelVersionDialog.cpp copasi/versioningUI/CBrowseModelVersionDialog.cpp.new + mv copasi/versioningUI/CBrowseModelVersionDialog.cpp.new copasi/versioningUI/CBrowseModelVersionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + touch -r copasi/versioning/CVCard.cpp copasi/versioning/CVCard.cpp.new + mv copasi/versioning/CVCard.cpp.new copasi/versioning/CVCard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + touch -r copasi/versioning/CModelVersionHierarchy.cpp copasi/versioning/CModelVersionHierarchy.cpp.new + mv copasi/versioning/CModelVersionHierarchy.cpp.new copasi/versioning/CModelVersionHierarchy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + touch -r copasi/versioning/CModelVersion.cpp copasi/versioning/CModelVersion.cpp.new + mv copasi/versioning/CModelVersion.cpp.new copasi/versioning/CModelVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + touch -r copasi/utilities/utility.cpp copasi/utilities/utility.cpp.new + mv copasi/utilities/utility.cpp.new copasi/utilities/utility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + touch -r copasi/utilities/dgemm.cpp copasi/utilities/dgemm.cpp.new + mv copasi/utilities/dgemm.cpp.new copasi/utilities/dgemm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + touch -r copasi/utilities/CopasiTime.cpp copasi/utilities/CopasiTime.cpp.new + mv copasi/utilities/CopasiTime.cpp.new copasi/utilities/CopasiTime.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + touch -r copasi/utilities/Cmd5.cpp copasi/utilities/Cmd5.cpp.new + mv copasi/utilities/Cmd5.cpp.new copasi/utilities/Cmd5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + touch -r copasi/utilities/CluX.cpp copasi/utilities/CluX.cpp.new + mv copasi/utilities/CluX.cpp.new copasi/utilities/CluX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + touch -r copasi/utilities/CVersion.cpp copasi/utilities/CVersion.cpp.new + mv copasi/utilities/CVersion.cpp.new copasi/utilities/CVersion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + touch -r copasi/utilities/CValidity.cpp copasi/utilities/CValidity.cpp.new + mv copasi/utilities/CValidity.cpp.new copasi/utilities/CValidity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + touch -r copasi/utilities/CValidatedUnit.cpp copasi/utilities/CValidatedUnit.cpp.new + mv copasi/utilities/CValidatedUnit.cpp.new copasi/utilities/CValidatedUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + touch -r copasi/utilities/CUnitValidator.cpp copasi/utilities/CUnitValidator.cpp.new + mv copasi/utilities/CUnitValidator.cpp.new copasi/utilities/CUnitValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + touch -r copasi/utilities/CUnitParser_yacc.cpp copasi/utilities/CUnitParser_yacc.cpp.new + mv copasi/utilities/CUnitParser_yacc.cpp.new copasi/utilities/CUnitParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + touch -r copasi/utilities/CUnitParser_lex.cpp copasi/utilities/CUnitParser_lex.cpp.new + mv copasi/utilities/CUnitParser_lex.cpp.new copasi/utilities/CUnitParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + touch -r copasi/utilities/CUnitParser.cpp copasi/utilities/CUnitParser.cpp.new + mv copasi/utilities/CUnitParser.cpp.new copasi/utilities/CUnitParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + touch -r copasi/utilities/CUnitDefinitionDB.cpp copasi/utilities/CUnitDefinitionDB.cpp.new + mv copasi/utilities/CUnitDefinitionDB.cpp.new copasi/utilities/CUnitDefinitionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + touch -r copasi/utilities/CUnitDefinition.cpp copasi/utilities/CUnitDefinition.cpp.new + mv copasi/utilities/CUnitDefinition.cpp.new copasi/utilities/CUnitDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + touch -r copasi/utilities/CUnitComponent.cpp copasi/utilities/CUnitComponent.cpp.new + mv copasi/utilities/CUnitComponent.cpp.new copasi/utilities/CUnitComponent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + touch -r copasi/utilities/CUnit.cpp copasi/utilities/CUnit.cpp.new + mv copasi/utilities/CUnit.cpp.new copasi/utilities/CUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + touch -r copasi/utilities/CTaskFactory.cpp copasi/utilities/CTaskFactory.cpp.new + mv copasi/utilities/CTaskFactory.cpp.new copasi/utilities/CTaskFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + touch -r copasi/utilities/CTaskEnum.cpp copasi/utilities/CTaskEnum.cpp.new + mv copasi/utilities/CTaskEnum.cpp.new copasi/utilities/CTaskEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + touch -r copasi/utilities/CTableCell.cpp copasi/utilities/CTableCell.cpp.new + mv copasi/utilities/CTableCell.cpp.new copasi/utilities/CTableCell.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + touch -r copasi/utilities/CSparseMatrix.cpp copasi/utilities/CSparseMatrix.cpp.new + mv copasi/utilities/CSparseMatrix.cpp.new copasi/utilities/CSparseMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + touch -r copasi/utilities/CSlider.cpp copasi/utilities/CSlider.cpp.new + mv copasi/utilities/CSlider.cpp.new copasi/utilities/CSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + touch -r copasi/utilities/CReadConfig.cpp copasi/utilities/CReadConfig.cpp.new + mv copasi/utilities/CReadConfig.cpp.new copasi/utilities/CReadConfig.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + touch -r copasi/utilities/CProcessReport.cpp copasi/utilities/CProcessReport.cpp.new + mv copasi/utilities/CProcessReport.cpp.new copasi/utilities/CProcessReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + touch -r copasi/utilities/CProblemFactory.cpp copasi/utilities/CProblemFactory.cpp.new + mv copasi/utilities/CProblemFactory.cpp.new copasi/utilities/CProblemFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + touch -r copasi/utilities/CParameterEstimationUtils.cpp copasi/utilities/CParameterEstimationUtils.cpp.new + mv copasi/utilities/CParameterEstimationUtils.cpp.new copasi/utilities/CParameterEstimationUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + touch -r copasi/utilities/CMethodFactory.cpp copasi/utilities/CMethodFactory.cpp.new + mv copasi/utilities/CMethodFactory.cpp.new copasi/utilities/CMethodFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + touch -r copasi/utilities/CLinkMatrix.cpp copasi/utilities/CLinkMatrix.cpp.new + mv copasi/utilities/CLinkMatrix.cpp.new copasi/utilities/CLinkMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + touch -r copasi/utilities/CLeastSquareSolution.cpp copasi/utilities/CLeastSquareSolution.cpp.new + mv copasi/utilities/CLeastSquareSolution.cpp.new copasi/utilities/CLeastSquareSolution.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + touch -r copasi/utilities/CIndexedPriorityQueue.cpp copasi/utilities/CIndexedPriorityQueue.cpp.new + mv copasi/utilities/CIndexedPriorityQueue.cpp.new copasi/utilities/CIndexedPriorityQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + touch -r copasi/utilities/CExpressionGenerator.cpp copasi/utilities/CExpressionGenerator.cpp.new + mv copasi/utilities/CExpressionGenerator.cpp.new copasi/utilities/CExpressionGenerator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + touch -r copasi/utilities/CDirEntry.cpp copasi/utilities/CDirEntry.cpp.new + mv copasi/utilities/CDirEntry.cpp.new copasi/utilities/CDirEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + touch -r copasi/utilities/CDependencyGraph.cpp copasi/utilities/CDependencyGraph.cpp.new + mv copasi/utilities/CDependencyGraph.cpp.new copasi/utilities/CDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + touch -r copasi/utilities/CCopasiTaskStatus.cpp copasi/utilities/CCopasiTaskStatus.cpp.new + mv copasi/utilities/CCopasiTaskStatus.cpp.new copasi/utilities/CCopasiTaskStatus.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + touch -r copasi/utilities/CCopasiTask.cpp copasi/utilities/CCopasiTask.cpp.new + mv copasi/utilities/CCopasiTask.cpp.new copasi/utilities/CCopasiTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + touch -r copasi/utilities/CCopasiProblem.cpp copasi/utilities/CCopasiProblem.cpp.new + mv copasi/utilities/CCopasiProblem.cpp.new copasi/utilities/CCopasiProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + touch -r copasi/utilities/CCopasiParameterGroup.cpp copasi/utilities/CCopasiParameterGroup.cpp.new + mv copasi/utilities/CCopasiParameterGroup.cpp.new copasi/utilities/CCopasiParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + touch -r copasi/utilities/CCopasiParameter.cpp copasi/utilities/CCopasiParameter.cpp.new + mv copasi/utilities/CCopasiParameter.cpp.new copasi/utilities/CCopasiParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + touch -r copasi/utilities/CCopasiMethod.cpp copasi/utilities/CCopasiMethod.cpp.new + mv copasi/utilities/CCopasiMethod.cpp.new copasi/utilities/CCopasiMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + touch -r copasi/utilities/CCopasiMessage.cpp copasi/utilities/CCopasiMessage.cpp.new + mv copasi/utilities/CCopasiMessage.cpp.new copasi/utilities/CCopasiMessage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + touch -r copasi/utilities/CCopasiException.cpp copasi/utilities/CCopasiException.cpp.new + mv copasi/utilities/CCopasiException.cpp.new copasi/utilities/CCopasiException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + touch -r copasi/utilities/CBrent.cpp copasi/utilities/CBrent.cpp.new + mv copasi/utilities/CBrent.cpp.new copasi/utilities/CBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + touch -r copasi/utilities/CBaseUnit.cpp copasi/utilities/CBaseUnit.cpp.new + mv copasi/utilities/CBaseUnit.cpp.new copasi/utilities/CBaseUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + touch -r copasi/undoUI/CQUndoDialog.cpp copasi/undoUI/CQUndoDialog.cpp.new + mv copasi/undoUI/CQUndoDialog.cpp.new copasi/undoUI/CQUndoDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + touch -r copasi/undoUI/CQUndoDM.cpp copasi/undoUI/CQUndoDM.cpp.new + mv copasi/undoUI/CQUndoDM.cpp.new copasi/undoUI/CQUndoDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + touch -r copasi/undo/CUndoStack.cpp copasi/undo/CUndoStack.cpp.new + mv copasi/undo/CUndoStack.cpp.new copasi/undo/CUndoStack.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + touch -r copasi/undo/CUndoObjectInterface.cpp copasi/undo/CUndoObjectInterface.cpp.new + mv copasi/undo/CUndoObjectInterface.cpp.new copasi/undo/CUndoObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + touch -r copasi/undo/CUndoData.cpp copasi/undo/CUndoData.cpp.new + mv copasi/undo/CUndoData.cpp.new copasi/undo/CUndoData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + touch -r copasi/undo/CDataValue.cpp copasi/undo/CDataValue.cpp.new + mv copasi/undo/CDataValue.cpp.new copasi/undo/CDataValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/undo/CData.cpp.new copasi/undo/CData.cpp + touch -r copasi/undo/CData.cpp copasi/undo/CData.cpp.new + mv copasi/undo/CData.cpp.new copasi/undo/CData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + touch -r copasi/tssanalysis/CTSSATask.cpp copasi/tssanalysis/CTSSATask.cpp.new + mv copasi/tssanalysis/CTSSATask.cpp.new copasi/tssanalysis/CTSSATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + touch -r copasi/tssanalysis/CTSSAProblem.cpp copasi/tssanalysis/CTSSAProblem.cpp.new + mv copasi/tssanalysis/CTSSAProblem.cpp.new copasi/tssanalysis/CTSSAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + touch -r copasi/tssanalysis/CTSSAMethod.cpp copasi/tssanalysis/CTSSAMethod.cpp.new + mv copasi/tssanalysis/CTSSAMethod.cpp.new copasi/tssanalysis/CTSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + touch -r copasi/tssanalysis/CILDMModifiedMethod.cpp copasi/tssanalysis/CILDMModifiedMethod.cpp.new + mv copasi/tssanalysis/CILDMModifiedMethod.cpp.new copasi/tssanalysis/CILDMModifiedMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + touch -r copasi/tssanalysis/CILDMMethod.cpp copasi/tssanalysis/CILDMMethod.cpp.new + mv copasi/tssanalysis/CILDMMethod.cpp.new copasi/tssanalysis/CILDMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + touch -r copasi/tssanalysis/CCSPMethod.cpp copasi/tssanalysis/CCSPMethod.cpp.new + mv copasi/tssanalysis/CCSPMethod.cpp.new copasi/tssanalysis/CCSPMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + touch -r copasi/tss/CODEExporterXPPAUT.cpp copasi/tss/CODEExporterXPPAUT.cpp.new + mv copasi/tss/CODEExporterXPPAUT.cpp.new copasi/tss/CODEExporterXPPAUT.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + touch -r copasi/tss/CODEExporterC.cpp copasi/tss/CODEExporterC.cpp.new + mv copasi/tss/CODEExporterC.cpp.new copasi/tss/CODEExporterC.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + touch -r copasi/tss/CODEExporterBM.cpp copasi/tss/CODEExporterBM.cpp.new + mv copasi/tss/CODEExporterBM.cpp.new copasi/tss/CODEExporterBM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + touch -r copasi/tss/CODEExporter.cpp copasi/tss/CODEExporter.cpp.new + mv copasi/tss/CODEExporter.cpp.new copasi/tss/CODEExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + touch -r copasi/trajectory/CTrajectoryTask.cpp copasi/trajectory/CTrajectoryTask.cpp.new + mv copasi/trajectory/CTrajectoryTask.cpp.new copasi/trajectory/CTrajectoryTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + touch -r copasi/trajectory/CTrajectoryProblem.cpp copasi/trajectory/CTrajectoryProblem.cpp.new + mv copasi/trajectory/CTrajectoryProblem.cpp.new copasi/trajectory/CTrajectoryProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + touch -r copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new + mv copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp.new copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + touch -r copasi/trajectory/CTrajectoryMethod.cpp copasi/trajectory/CTrajectoryMethod.cpp.new + mv copasi/trajectory/CTrajectoryMethod.cpp.new copasi/trajectory/CTrajectoryMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + touch -r copasi/trajectory/CTrajAdaptiveSA.cpp copasi/trajectory/CTrajAdaptiveSA.cpp.new + mv copasi/trajectory/CTrajAdaptiveSA.cpp.new copasi/trajectory/CTrajAdaptiveSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + touch -r copasi/trajectory/CTimeSeries.cpp copasi/trajectory/CTimeSeries.cpp.new + mv copasi/trajectory/CTimeSeries.cpp.new copasi/trajectory/CTimeSeries.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + touch -r copasi/trajectory/CTauLeapMethod.cpp copasi/trajectory/CTauLeapMethod.cpp.new + mv copasi/trajectory/CTauLeapMethod.cpp.new copasi/trajectory/CTauLeapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + touch -r copasi/trajectory/CStochasticRungeKuttaRI5.cpp copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new + mv copasi/trajectory/CStochasticRungeKuttaRI5.cpp.new copasi/trajectory/CStochasticRungeKuttaRI5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + touch -r copasi/trajectory/CStochNextReactionMethod.cpp copasi/trajectory/CStochNextReactionMethod.cpp.new + mv copasi/trajectory/CStochNextReactionMethod.cpp.new copasi/trajectory/CStochNextReactionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + touch -r copasi/trajectory/CStochMethod.cpp copasi/trajectory/CStochMethod.cpp.new + mv copasi/trajectory/CStochMethod.cpp.new copasi/trajectory/CStochMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + touch -r copasi/trajectory/CStochDirectMethod.cpp copasi/trajectory/CStochDirectMethod.cpp.new + mv copasi/trajectory/CStochDirectMethod.cpp.new copasi/trajectory/CStochDirectMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + touch -r copasi/trajectory/CRungeKutta.cpp copasi/trajectory/CRungeKutta.cpp.new + mv copasi/trajectory/CRungeKutta.cpp.new copasi/trajectory/CRungeKutta.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + touch -r copasi/trajectory/CRootFinder.cpp copasi/trajectory/CRootFinder.cpp.new + mv copasi/trajectory/CRootFinder.cpp.new copasi/trajectory/CRootFinder.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + touch -r copasi/trajectory/CRadau5Method.cpp copasi/trajectory/CRadau5Method.cpp.new + mv copasi/trajectory/CRadau5Method.cpp.new copasi/trajectory/CRadau5Method.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + touch -r copasi/trajectory/CLsodaMethod2.cpp copasi/trajectory/CLsodaMethod2.cpp.new + mv copasi/trajectory/CLsodaMethod2.cpp.new copasi/trajectory/CLsodaMethod2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + touch -r copasi/trajectory/CLsodaMethod.cpp copasi/trajectory/CLsodaMethod.cpp.new + mv copasi/trajectory/CLsodaMethod.cpp.new copasi/trajectory/CLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionRKMethod.cpp copasi/trajectory/CHybridNextReactionRKMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionRKMethod.cpp.new copasi/trajectory/CHybridNextReactionRKMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + touch -r copasi/trajectory/CHybridNextReactionLSODAMethod.cpp copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new + mv copasi/trajectory/CHybridNextReactionLSODAMethod.cpp.new copasi/trajectory/CHybridNextReactionLSODAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + touch -r copasi/trajectory/CHybridMethodODE45.cpp copasi/trajectory/CHybridMethodODE45.cpp.new + mv copasi/trajectory/CHybridMethodODE45.cpp.new copasi/trajectory/CHybridMethodODE45.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + touch -r copasi/trajectory/CHybridMethod.cpp copasi/trajectory/CHybridMethod.cpp.new + mv copasi/trajectory/CHybridMethod.cpp.new copasi/trajectory/CHybridMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + touch -r copasi/timesens/CTimeSensTask.cpp copasi/timesens/CTimeSensTask.cpp.new + mv copasi/timesens/CTimeSensTask.cpp.new copasi/timesens/CTimeSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + touch -r copasi/timesens/CTimeSensProblem.cpp copasi/timesens/CTimeSensProblem.cpp.new + mv copasi/timesens/CTimeSensProblem.cpp.new copasi/timesens/CTimeSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + touch -r copasi/timesens/CTimeSensMethod.cpp copasi/timesens/CTimeSensMethod.cpp.new + mv copasi/timesens/CTimeSensMethod.cpp.new copasi/timesens/CTimeSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + touch -r copasi/timesens/CTimeSensLsodaMethod.cpp copasi/timesens/CTimeSensLsodaMethod.cpp.new + mv copasi/timesens/CTimeSensLsodaMethod.cpp.new copasi/timesens/CTimeSensLsodaMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + touch -r copasi/tex/CStructureParser.cpp copasi/tex/CStructureParser.cpp.new + mv copasi/tex/CStructureParser.cpp.new copasi/tex/CStructureParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + touch -r copasi/tex/CMathMLToTeX.cpp copasi/tex/CMathMLToTeX.cpp.new + mv copasi/tex/CMathMLToTeX.cpp.new copasi/tex/CMathMLToTeX.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/test.cpp.new copasi/test2/test.cpp + touch -r copasi/test2/test.cpp copasi/test2/test.cpp.new + mv copasi/test2/test.cpp.new copasi/test2/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + touch -r copasi/test2/CNormalTranslation.cpp copasi/test2/CNormalTranslation.cpp.new + mv copasi/test2/CNormalTranslation.cpp.new copasi/test2/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + touch -r copasi/test2/CNormalSum.cpp copasi/test2/CNormalSum.cpp.new + mv copasi/test2/CNormalSum.cpp.new copasi/test2/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + touch -r copasi/test2/CNormalProduct.cpp copasi/test2/CNormalProduct.cpp.new + mv copasi/test2/CNormalProduct.cpp.new copasi/test2/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + touch -r copasi/test2/CNormalLcm.cpp copasi/test2/CNormalLcm.cpp.new + mv copasi/test2/CNormalLcm.cpp.new copasi/test2/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + touch -r copasi/test2/CNormalItemPower.cpp copasi/test2/CNormalItemPower.cpp.new + mv copasi/test2/CNormalItemPower.cpp.new copasi/test2/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + touch -r copasi/test2/CNormalItem.cpp copasi/test2/CNormalItem.cpp.new + mv copasi/test2/CNormalItem.cpp.new copasi/test2/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + touch -r copasi/test2/CNormalFraction.cpp copasi/test2/CNormalFraction.cpp.new + mv copasi/test2/CNormalFraction.cpp.new copasi/test2/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/test/test.cpp.new copasi/test/test.cpp + touch -r copasi/test/test.cpp copasi/test/test.cpp.new + mv copasi/test/test.cpp.new copasi/test/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + touch -r copasi/steadystate/CSteadyStateTask.cpp copasi/steadystate/CSteadyStateTask.cpp.new + mv copasi/steadystate/CSteadyStateTask.cpp.new copasi/steadystate/CSteadyStateTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + touch -r copasi/steadystate/CSteadyStateProblem.cpp copasi/steadystate/CSteadyStateProblem.cpp.new + mv copasi/steadystate/CSteadyStateProblem.cpp.new copasi/steadystate/CSteadyStateProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + touch -r copasi/steadystate/CSteadyStateMethod.cpp copasi/steadystate/CSteadyStateMethod.cpp.new + mv copasi/steadystate/CSteadyStateMethod.cpp.new copasi/steadystate/CSteadyStateMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + touch -r copasi/steadystate/CNewtonMethod.cpp copasi/steadystate/CNewtonMethod.cpp.new + mv copasi/steadystate/CNewtonMethod.cpp.new copasi/steadystate/CNewtonMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + touch -r copasi/steadystate/CMCATask.cpp copasi/steadystate/CMCATask.cpp.new + mv copasi/steadystate/CMCATask.cpp.new copasi/steadystate/CMCATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + touch -r copasi/steadystate/CMCAProblem.cpp copasi/steadystate/CMCAProblem.cpp.new + mv copasi/steadystate/CMCAProblem.cpp.new copasi/steadystate/CMCAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + touch -r copasi/steadystate/CMCAMethod.cpp copasi/steadystate/CMCAMethod.cpp.new + mv copasi/steadystate/CMCAMethod.cpp.new copasi/steadystate/CMCAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + touch -r copasi/steadystate/CEigen.cpp copasi/steadystate/CEigen.cpp.new + mv copasi/steadystate/CEigen.cpp.new copasi/steadystate/CEigen.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + touch -r copasi/sensitivities/CSensTask.cpp copasi/sensitivities/CSensTask.cpp.new + mv copasi/sensitivities/CSensTask.cpp.new copasi/sensitivities/CSensTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + touch -r copasi/sensitivities/CSensProblem.cpp copasi/sensitivities/CSensProblem.cpp.new + mv copasi/sensitivities/CSensProblem.cpp.new copasi/sensitivities/CSensProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + touch -r copasi/sensitivities/CSensMethod.cpp copasi/sensitivities/CSensMethod.cpp.new + mv copasi/sensitivities/CSensMethod.cpp.new copasi/sensitivities/CSensMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + touch -r copasi/sedml/SEDMLUtils.cpp copasi/sedml/SEDMLUtils.cpp.new + mv copasi/sedml/SEDMLUtils.cpp.new copasi/sedml/SEDMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + touch -r copasi/sedml/SEDMLImporter.cpp copasi/sedml/SEDMLImporter.cpp.new + mv copasi/sedml/SEDMLImporter.cpp.new copasi/sedml/SEDMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + touch -r copasi/sedml/CSEDMLExporter.cpp copasi/sedml/CSEDMLExporter.cpp.new + mv copasi/sedml/CSEDMLExporter.cpp.new copasi/sedml/CSEDMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + touch -r copasi/scan/CScanTask.cpp copasi/scan/CScanTask.cpp.new + mv copasi/scan/CScanTask.cpp.new copasi/scan/CScanTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + touch -r copasi/scan/CScanProblem.cpp copasi/scan/CScanProblem.cpp.new + mv copasi/scan/CScanProblem.cpp.new copasi/scan/CScanProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + touch -r copasi/scan/CScanMethod.cpp copasi/scan/CScanMethod.cpp.new + mv copasi/scan/CScanMethod.cpp.new copasi/scan/CScanMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + touch -r copasi/sbmlunit/Expression2PresentationMMLUnits.cpp copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new + mv copasi/sbmlunit/Expression2PresentationMMLUnits.cpp.new copasi/sbmlunit/Expression2PresentationMMLUnits.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + touch -r copasi/sbmlunit/Expression2PresentationMML.cpp copasi/sbmlunit/Expression2PresentationMML.cpp.new + mv copasi/sbmlunit/Expression2PresentationMML.cpp.new copasi/sbmlunit/Expression2PresentationMML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + touch -r copasi/sbmlunit/CSBMLunitInterface.cpp copasi/sbmlunit/CSBMLunitInterface.cpp.new + mv copasi/sbmlunit/CSBMLunitInterface.cpp.new copasi/sbmlunit/CSBMLunitInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + touch -r copasi/sbmlunit/CSBMLunit.cpp copasi/sbmlunit/CSBMLunit.cpp.new + mv copasi/sbmlunit/CSBMLunit.cpp.new copasi/sbmlunit/CSBMLunit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + touch -r copasi/sbml/unittests/utilities.cpp copasi/sbml/unittests/utilities.cpp.new + mv copasi/sbml/unittests/utilities.cpp.new copasi/sbml/unittests/utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + touch -r copasi/sbml/unittests/test000104.cpp copasi/sbml/unittests/test000104.cpp.new + mv copasi/sbml/unittests/test000104.cpp.new copasi/sbml/unittests/test000104.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + touch -r copasi/sbml/unittests/test000103.cpp copasi/sbml/unittests/test000103.cpp.new + mv copasi/sbml/unittests/test000103.cpp.new copasi/sbml/unittests/test000103.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + touch -r copasi/sbml/unittests/test000102.cpp copasi/sbml/unittests/test000102.cpp.new + mv copasi/sbml/unittests/test000102.cpp.new copasi/sbml/unittests/test000102.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + touch -r copasi/sbml/unittests/test000101.cpp copasi/sbml/unittests/test000101.cpp.new + mv copasi/sbml/unittests/test000101.cpp.new copasi/sbml/unittests/test000101.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + touch -r copasi/sbml/unittests/test000100.cpp copasi/sbml/unittests/test000100.cpp.new + mv copasi/sbml/unittests/test000100.cpp.new copasi/sbml/unittests/test000100.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + touch -r copasi/sbml/unittests/test000099.cpp copasi/sbml/unittests/test000099.cpp.new + mv copasi/sbml/unittests/test000099.cpp.new copasi/sbml/unittests/test000099.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + touch -r copasi/sbml/unittests/test000098.cpp copasi/sbml/unittests/test000098.cpp.new + mv copasi/sbml/unittests/test000098.cpp.new copasi/sbml/unittests/test000098.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + touch -r copasi/sbml/unittests/test000097.cpp copasi/sbml/unittests/test000097.cpp.new + mv copasi/sbml/unittests/test000097.cpp.new copasi/sbml/unittests/test000097.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + touch -r copasi/sbml/unittests/test000096.cpp copasi/sbml/unittests/test000096.cpp.new + mv copasi/sbml/unittests/test000096.cpp.new copasi/sbml/unittests/test000096.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + touch -r copasi/sbml/unittests/test000095.cpp copasi/sbml/unittests/test000095.cpp.new + mv copasi/sbml/unittests/test000095.cpp.new copasi/sbml/unittests/test000095.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + touch -r copasi/sbml/unittests/test000094.cpp copasi/sbml/unittests/test000094.cpp.new + mv copasi/sbml/unittests/test000094.cpp.new copasi/sbml/unittests/test000094.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + touch -r copasi/sbml/unittests/test000093.cpp copasi/sbml/unittests/test000093.cpp.new + mv copasi/sbml/unittests/test000093.cpp.new copasi/sbml/unittests/test000093.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + touch -r copasi/sbml/unittests/test000092.cpp copasi/sbml/unittests/test000092.cpp.new + mv copasi/sbml/unittests/test000092.cpp.new copasi/sbml/unittests/test000092.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + touch -r copasi/sbml/unittests/test000091.cpp copasi/sbml/unittests/test000091.cpp.new + mv copasi/sbml/unittests/test000091.cpp.new copasi/sbml/unittests/test000091.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + touch -r copasi/sbml/unittests/test000090.cpp copasi/sbml/unittests/test000090.cpp.new + mv copasi/sbml/unittests/test000090.cpp.new copasi/sbml/unittests/test000090.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + touch -r copasi/sbml/unittests/test000089.cpp copasi/sbml/unittests/test000089.cpp.new + mv copasi/sbml/unittests/test000089.cpp.new copasi/sbml/unittests/test000089.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + touch -r copasi/sbml/unittests/test000088.cpp copasi/sbml/unittests/test000088.cpp.new + mv copasi/sbml/unittests/test000088.cpp.new copasi/sbml/unittests/test000088.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + touch -r copasi/sbml/unittests/test000087.cpp copasi/sbml/unittests/test000087.cpp.new + mv copasi/sbml/unittests/test000087.cpp.new copasi/sbml/unittests/test000087.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + touch -r copasi/sbml/unittests/test000086.cpp copasi/sbml/unittests/test000086.cpp.new + mv copasi/sbml/unittests/test000086.cpp.new copasi/sbml/unittests/test000086.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + touch -r copasi/sbml/unittests/test000085.cpp copasi/sbml/unittests/test000085.cpp.new + mv copasi/sbml/unittests/test000085.cpp.new copasi/sbml/unittests/test000085.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + touch -r copasi/sbml/unittests/test000084.cpp copasi/sbml/unittests/test000084.cpp.new + mv copasi/sbml/unittests/test000084.cpp.new copasi/sbml/unittests/test000084.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + touch -r copasi/sbml/unittests/test000083.cpp copasi/sbml/unittests/test000083.cpp.new + mv copasi/sbml/unittests/test000083.cpp.new copasi/sbml/unittests/test000083.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + touch -r copasi/sbml/unittests/test000082.cpp copasi/sbml/unittests/test000082.cpp.new + mv copasi/sbml/unittests/test000082.cpp.new copasi/sbml/unittests/test000082.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + touch -r copasi/sbml/unittests/test000081.cpp copasi/sbml/unittests/test000081.cpp.new + mv copasi/sbml/unittests/test000081.cpp.new copasi/sbml/unittests/test000081.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + touch -r copasi/sbml/unittests/test000080.cpp copasi/sbml/unittests/test000080.cpp.new + mv copasi/sbml/unittests/test000080.cpp.new copasi/sbml/unittests/test000080.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + touch -r copasi/sbml/unittests/test000079.cpp copasi/sbml/unittests/test000079.cpp.new + mv copasi/sbml/unittests/test000079.cpp.new copasi/sbml/unittests/test000079.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + touch -r copasi/sbml/unittests/test000078.cpp copasi/sbml/unittests/test000078.cpp.new + mv copasi/sbml/unittests/test000078.cpp.new copasi/sbml/unittests/test000078.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + touch -r copasi/sbml/unittests/test000077.cpp copasi/sbml/unittests/test000077.cpp.new + mv copasi/sbml/unittests/test000077.cpp.new copasi/sbml/unittests/test000077.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + touch -r copasi/sbml/unittests/test000076.cpp copasi/sbml/unittests/test000076.cpp.new + mv copasi/sbml/unittests/test000076.cpp.new copasi/sbml/unittests/test000076.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + touch -r copasi/sbml/unittests/test000075.cpp copasi/sbml/unittests/test000075.cpp.new + mv copasi/sbml/unittests/test000075.cpp.new copasi/sbml/unittests/test000075.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + touch -r copasi/sbml/unittests/test000074.cpp copasi/sbml/unittests/test000074.cpp.new + mv copasi/sbml/unittests/test000074.cpp.new copasi/sbml/unittests/test000074.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + touch -r copasi/sbml/unittests/test000073.cpp copasi/sbml/unittests/test000073.cpp.new + mv copasi/sbml/unittests/test000073.cpp.new copasi/sbml/unittests/test000073.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + touch -r copasi/sbml/unittests/test000072.cpp copasi/sbml/unittests/test000072.cpp.new + mv copasi/sbml/unittests/test000072.cpp.new copasi/sbml/unittests/test000072.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + touch -r copasi/sbml/unittests/test000071.cpp copasi/sbml/unittests/test000071.cpp.new + mv copasi/sbml/unittests/test000071.cpp.new copasi/sbml/unittests/test000071.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + touch -r copasi/sbml/unittests/test000070.cpp copasi/sbml/unittests/test000070.cpp.new + mv copasi/sbml/unittests/test000070.cpp.new copasi/sbml/unittests/test000070.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + touch -r copasi/sbml/unittests/test000069.cpp copasi/sbml/unittests/test000069.cpp.new + mv copasi/sbml/unittests/test000069.cpp.new copasi/sbml/unittests/test000069.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + touch -r copasi/sbml/unittests/test000068.cpp copasi/sbml/unittests/test000068.cpp.new + mv copasi/sbml/unittests/test000068.cpp.new copasi/sbml/unittests/test000068.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + touch -r copasi/sbml/unittests/test000067.cpp copasi/sbml/unittests/test000067.cpp.new + mv copasi/sbml/unittests/test000067.cpp.new copasi/sbml/unittests/test000067.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + touch -r copasi/sbml/unittests/test000066.cpp copasi/sbml/unittests/test000066.cpp.new + mv copasi/sbml/unittests/test000066.cpp.new copasi/sbml/unittests/test000066.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + touch -r copasi/sbml/unittests/test000065.cpp copasi/sbml/unittests/test000065.cpp.new + mv copasi/sbml/unittests/test000065.cpp.new copasi/sbml/unittests/test000065.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + touch -r copasi/sbml/unittests/test000064.cpp copasi/sbml/unittests/test000064.cpp.new + mv copasi/sbml/unittests/test000064.cpp.new copasi/sbml/unittests/test000064.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + touch -r copasi/sbml/unittests/test000063.cpp copasi/sbml/unittests/test000063.cpp.new + mv copasi/sbml/unittests/test000063.cpp.new copasi/sbml/unittests/test000063.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + touch -r copasi/sbml/unittests/test000062.cpp copasi/sbml/unittests/test000062.cpp.new + mv copasi/sbml/unittests/test000062.cpp.new copasi/sbml/unittests/test000062.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + touch -r copasi/sbml/unittests/test000061.cpp copasi/sbml/unittests/test000061.cpp.new + mv copasi/sbml/unittests/test000061.cpp.new copasi/sbml/unittests/test000061.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + touch -r copasi/sbml/unittests/test000060.cpp copasi/sbml/unittests/test000060.cpp.new + mv copasi/sbml/unittests/test000060.cpp.new copasi/sbml/unittests/test000060.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + touch -r copasi/sbml/unittests/test000059.cpp copasi/sbml/unittests/test000059.cpp.new + mv copasi/sbml/unittests/test000059.cpp.new copasi/sbml/unittests/test000059.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + touch -r copasi/sbml/unittests/test000058.cpp copasi/sbml/unittests/test000058.cpp.new + mv copasi/sbml/unittests/test000058.cpp.new copasi/sbml/unittests/test000058.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + touch -r copasi/sbml/unittests/test000057.cpp copasi/sbml/unittests/test000057.cpp.new + mv copasi/sbml/unittests/test000057.cpp.new copasi/sbml/unittests/test000057.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + touch -r copasi/sbml/unittests/test000056.cpp copasi/sbml/unittests/test000056.cpp.new + mv copasi/sbml/unittests/test000056.cpp.new copasi/sbml/unittests/test000056.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + touch -r copasi/sbml/unittests/test000055.cpp copasi/sbml/unittests/test000055.cpp.new + mv copasi/sbml/unittests/test000055.cpp.new copasi/sbml/unittests/test000055.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + touch -r copasi/sbml/unittests/test000054.cpp copasi/sbml/unittests/test000054.cpp.new + mv copasi/sbml/unittests/test000054.cpp.new copasi/sbml/unittests/test000054.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + touch -r copasi/sbml/unittests/test000053.cpp copasi/sbml/unittests/test000053.cpp.new + mv copasi/sbml/unittests/test000053.cpp.new copasi/sbml/unittests/test000053.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + touch -r copasi/sbml/unittests/test000052.cpp copasi/sbml/unittests/test000052.cpp.new + mv copasi/sbml/unittests/test000052.cpp.new copasi/sbml/unittests/test000052.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + touch -r copasi/sbml/unittests/test000051.cpp copasi/sbml/unittests/test000051.cpp.new + mv copasi/sbml/unittests/test000051.cpp.new copasi/sbml/unittests/test000051.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + touch -r copasi/sbml/unittests/test000050.cpp copasi/sbml/unittests/test000050.cpp.new + mv copasi/sbml/unittests/test000050.cpp.new copasi/sbml/unittests/test000050.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + touch -r copasi/sbml/unittests/test000049.cpp copasi/sbml/unittests/test000049.cpp.new + mv copasi/sbml/unittests/test000049.cpp.new copasi/sbml/unittests/test000049.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + touch -r copasi/sbml/unittests/test000048.cpp copasi/sbml/unittests/test000048.cpp.new + mv copasi/sbml/unittests/test000048.cpp.new copasi/sbml/unittests/test000048.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + touch -r copasi/sbml/unittests/test000047.cpp copasi/sbml/unittests/test000047.cpp.new + mv copasi/sbml/unittests/test000047.cpp.new copasi/sbml/unittests/test000047.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + touch -r copasi/sbml/unittests/test000046.cpp copasi/sbml/unittests/test000046.cpp.new + mv copasi/sbml/unittests/test000046.cpp.new copasi/sbml/unittests/test000046.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + touch -r copasi/sbml/unittests/test000045.cpp copasi/sbml/unittests/test000045.cpp.new + mv copasi/sbml/unittests/test000045.cpp.new copasi/sbml/unittests/test000045.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + touch -r copasi/sbml/unittests/test000044.cpp copasi/sbml/unittests/test000044.cpp.new + mv copasi/sbml/unittests/test000044.cpp.new copasi/sbml/unittests/test000044.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + touch -r copasi/sbml/unittests/test000043.cpp copasi/sbml/unittests/test000043.cpp.new + mv copasi/sbml/unittests/test000043.cpp.new copasi/sbml/unittests/test000043.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + touch -r copasi/sbml/unittests/test000042.cpp copasi/sbml/unittests/test000042.cpp.new + mv copasi/sbml/unittests/test000042.cpp.new copasi/sbml/unittests/test000042.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + touch -r copasi/sbml/unittests/test000041.cpp copasi/sbml/unittests/test000041.cpp.new + mv copasi/sbml/unittests/test000041.cpp.new copasi/sbml/unittests/test000041.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + touch -r copasi/sbml/unittests/test000040.cpp copasi/sbml/unittests/test000040.cpp.new + mv copasi/sbml/unittests/test000040.cpp.new copasi/sbml/unittests/test000040.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + touch -r copasi/sbml/unittests/test000039.cpp copasi/sbml/unittests/test000039.cpp.new + mv copasi/sbml/unittests/test000039.cpp.new copasi/sbml/unittests/test000039.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + touch -r copasi/sbml/unittests/test000038.cpp copasi/sbml/unittests/test000038.cpp.new + mv copasi/sbml/unittests/test000038.cpp.new copasi/sbml/unittests/test000038.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + touch -r copasi/sbml/unittests/test000037.cpp copasi/sbml/unittests/test000037.cpp.new + mv copasi/sbml/unittests/test000037.cpp.new copasi/sbml/unittests/test000037.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + touch -r copasi/sbml/unittests/test000036.cpp copasi/sbml/unittests/test000036.cpp.new + mv copasi/sbml/unittests/test000036.cpp.new copasi/sbml/unittests/test000036.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + touch -r copasi/sbml/unittests/test000035.cpp copasi/sbml/unittests/test000035.cpp.new + mv copasi/sbml/unittests/test000035.cpp.new copasi/sbml/unittests/test000035.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + touch -r copasi/sbml/unittests/test000034.cpp copasi/sbml/unittests/test000034.cpp.new + mv copasi/sbml/unittests/test000034.cpp.new copasi/sbml/unittests/test000034.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + touch -r copasi/sbml/unittests/test000033.cpp copasi/sbml/unittests/test000033.cpp.new + mv copasi/sbml/unittests/test000033.cpp.new copasi/sbml/unittests/test000033.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + touch -r copasi/sbml/unittests/test000032.cpp copasi/sbml/unittests/test000032.cpp.new + mv copasi/sbml/unittests/test000032.cpp.new copasi/sbml/unittests/test000032.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + touch -r copasi/sbml/unittests/test000031.cpp copasi/sbml/unittests/test000031.cpp.new + mv copasi/sbml/unittests/test000031.cpp.new copasi/sbml/unittests/test000031.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + touch -r copasi/sbml/unittests/test000030.cpp copasi/sbml/unittests/test000030.cpp.new + mv copasi/sbml/unittests/test000030.cpp.new copasi/sbml/unittests/test000030.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + touch -r copasi/sbml/unittests/test000029.cpp copasi/sbml/unittests/test000029.cpp.new + mv copasi/sbml/unittests/test000029.cpp.new copasi/sbml/unittests/test000029.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + touch -r copasi/sbml/unittests/test000028.cpp copasi/sbml/unittests/test000028.cpp.new + mv copasi/sbml/unittests/test000028.cpp.new copasi/sbml/unittests/test000028.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + touch -r copasi/sbml/unittests/test000027.cpp copasi/sbml/unittests/test000027.cpp.new + mv copasi/sbml/unittests/test000027.cpp.new copasi/sbml/unittests/test000027.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + touch -r copasi/sbml/unittests/test000026.cpp copasi/sbml/unittests/test000026.cpp.new + mv copasi/sbml/unittests/test000026.cpp.new copasi/sbml/unittests/test000026.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + touch -r copasi/sbml/unittests/test000025.cpp copasi/sbml/unittests/test000025.cpp.new + mv copasi/sbml/unittests/test000025.cpp.new copasi/sbml/unittests/test000025.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + touch -r copasi/sbml/unittests/test000024.cpp copasi/sbml/unittests/test000024.cpp.new + mv copasi/sbml/unittests/test000024.cpp.new copasi/sbml/unittests/test000024.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + touch -r copasi/sbml/unittests/test000023.cpp copasi/sbml/unittests/test000023.cpp.new + mv copasi/sbml/unittests/test000023.cpp.new copasi/sbml/unittests/test000023.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + touch -r copasi/sbml/unittests/test000022.cpp copasi/sbml/unittests/test000022.cpp.new + mv copasi/sbml/unittests/test000022.cpp.new copasi/sbml/unittests/test000022.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + touch -r copasi/sbml/unittests/test000021.cpp copasi/sbml/unittests/test000021.cpp.new + mv copasi/sbml/unittests/test000021.cpp.new copasi/sbml/unittests/test000021.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + touch -r copasi/sbml/unittests/test000020.cpp copasi/sbml/unittests/test000020.cpp.new + mv copasi/sbml/unittests/test000020.cpp.new copasi/sbml/unittests/test000020.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + touch -r copasi/sbml/unittests/test000019.cpp copasi/sbml/unittests/test000019.cpp.new + mv copasi/sbml/unittests/test000019.cpp.new copasi/sbml/unittests/test000019.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + touch -r copasi/sbml/unittests/test000018.cpp copasi/sbml/unittests/test000018.cpp.new + mv copasi/sbml/unittests/test000018.cpp.new copasi/sbml/unittests/test000018.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + touch -r copasi/sbml/unittests/test000017.cpp copasi/sbml/unittests/test000017.cpp.new + mv copasi/sbml/unittests/test000017.cpp.new copasi/sbml/unittests/test000017.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + touch -r copasi/sbml/unittests/test000016.cpp copasi/sbml/unittests/test000016.cpp.new + mv copasi/sbml/unittests/test000016.cpp.new copasi/sbml/unittests/test000016.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + touch -r copasi/sbml/unittests/test000015.cpp copasi/sbml/unittests/test000015.cpp.new + mv copasi/sbml/unittests/test000015.cpp.new copasi/sbml/unittests/test000015.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + touch -r copasi/sbml/unittests/test000014.cpp copasi/sbml/unittests/test000014.cpp.new + mv copasi/sbml/unittests/test000014.cpp.new copasi/sbml/unittests/test000014.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + touch -r copasi/sbml/unittests/test000013.cpp copasi/sbml/unittests/test000013.cpp.new + mv copasi/sbml/unittests/test000013.cpp.new copasi/sbml/unittests/test000013.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + touch -r copasi/sbml/unittests/test000012.cpp copasi/sbml/unittests/test000012.cpp.new + mv copasi/sbml/unittests/test000012.cpp.new copasi/sbml/unittests/test000012.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + touch -r copasi/sbml/unittests/test000011.cpp copasi/sbml/unittests/test000011.cpp.new + mv copasi/sbml/unittests/test000011.cpp.new copasi/sbml/unittests/test000011.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + touch -r copasi/sbml/unittests/test000010.cpp copasi/sbml/unittests/test000010.cpp.new + mv copasi/sbml/unittests/test000010.cpp.new copasi/sbml/unittests/test000010.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + touch -r copasi/sbml/unittests/test000009.cpp copasi/sbml/unittests/test000009.cpp.new + mv copasi/sbml/unittests/test000009.cpp.new copasi/sbml/unittests/test000009.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + touch -r copasi/sbml/unittests/test000008.cpp copasi/sbml/unittests/test000008.cpp.new + mv copasi/sbml/unittests/test000008.cpp.new copasi/sbml/unittests/test000008.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + touch -r copasi/sbml/unittests/test000007.cpp copasi/sbml/unittests/test000007.cpp.new + mv copasi/sbml/unittests/test000007.cpp.new copasi/sbml/unittests/test000007.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + touch -r copasi/sbml/unittests/test000006.cpp copasi/sbml/unittests/test000006.cpp.new + mv copasi/sbml/unittests/test000006.cpp.new copasi/sbml/unittests/test000006.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + touch -r copasi/sbml/unittests/test000005.cpp copasi/sbml/unittests/test000005.cpp.new + mv copasi/sbml/unittests/test000005.cpp.new copasi/sbml/unittests/test000005.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + touch -r copasi/sbml/unittests/test000004.cpp copasi/sbml/unittests/test000004.cpp.new + mv copasi/sbml/unittests/test000004.cpp.new copasi/sbml/unittests/test000004.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + touch -r copasi/sbml/unittests/test000003.cpp copasi/sbml/unittests/test000003.cpp.new + mv copasi/sbml/unittests/test000003.cpp.new copasi/sbml/unittests/test000003.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + touch -r copasi/sbml/unittests/test000002.cpp copasi/sbml/unittests/test000002.cpp.new + mv copasi/sbml/unittests/test000002.cpp.new copasi/sbml/unittests/test000002.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + touch -r copasi/sbml/unittests/test000001.cpp copasi/sbml/unittests/test000001.cpp.new + mv copasi/sbml/unittests/test000001.cpp.new copasi/sbml/unittests/test000001.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + touch -r copasi/sbml/unittests/test.cpp copasi/sbml/unittests/test.cpp.new + mv copasi/sbml/unittests/test.cpp.new copasi/sbml/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + touch -r copasi/sbml/StdException.cpp copasi/sbml/StdException.cpp.new + mv copasi/sbml/StdException.cpp.new copasi/sbml/StdException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + touch -r copasi/sbml/SBMLUtils.cpp copasi/sbml/SBMLUtils.cpp.new + mv copasi/sbml/SBMLUtils.cpp.new copasi/sbml/SBMLUtils.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + touch -r copasi/sbml/SBMLUnitSupport.cpp copasi/sbml/SBMLUnitSupport.cpp.new + mv copasi/sbml/SBMLUnitSupport.cpp.new copasi/sbml/SBMLUnitSupport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + touch -r copasi/sbml/SBMLReference.cpp copasi/sbml/SBMLReference.cpp.new + mv copasi/sbml/SBMLReference.cpp.new copasi/sbml/SBMLReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + touch -r copasi/sbml/SBMLIncompatibility.cpp copasi/sbml/SBMLIncompatibility.cpp.new + mv copasi/sbml/SBMLIncompatibility.cpp.new copasi/sbml/SBMLIncompatibility.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + touch -r copasi/sbml/SBMLImporter.cpp copasi/sbml/SBMLImporter.cpp.new + mv copasi/sbml/SBMLImporter.cpp.new copasi/sbml/SBMLImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + touch -r copasi/sbml/ConverterASTNode.cpp copasi/sbml/ConverterASTNode.cpp.new + mv copasi/sbml/ConverterASTNode.cpp.new copasi/sbml/ConverterASTNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + touch -r copasi/sbml/CSBMLExporter.cpp copasi/sbml/CSBMLExporter.cpp.new + mv copasi/sbml/CSBMLExporter.cpp.new copasi/sbml/CSBMLExporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + touch -r copasi/sbml/CCellDesignerImporter.cpp copasi/sbml/CCellDesignerImporter.cpp.new + mv copasi/sbml/CCellDesignerImporter.cpp.new copasi/sbml/CCellDesignerImporter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + touch -r copasi/resourcesUI/CQIconResource.cpp copasi/resourcesUI/CQIconResource.cpp.new + mv copasi/resourcesUI/CQIconResource.cpp.new copasi/resourcesUI/CQIconResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + touch -r copasi/report/CReportDefinitionVector.cpp copasi/report/CReportDefinitionVector.cpp.new + mv copasi/report/CReportDefinitionVector.cpp.new copasi/report/CReportDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + touch -r copasi/report/CReportDefinition.cpp copasi/report/CReportDefinition.cpp.new + mv copasi/report/CReportDefinition.cpp.new copasi/report/CReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + touch -r copasi/report/CReportBody.cpp copasi/report/CReportBody.cpp.new + mv copasi/report/CReportBody.cpp.new copasi/report/CReportBody.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CReport.cpp.new copasi/report/CReport.cpp + touch -r copasi/report/CReport.cpp copasi/report/CReport.cpp.new + mv copasi/report/CReport.cpp.new copasi/report/CReport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + touch -r copasi/report/COutputAssistant.cpp copasi/report/COutputAssistant.cpp.new + mv copasi/report/COutputAssistant.cpp.new copasi/report/COutputAssistant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + touch -r copasi/report/CKeyFactory.cpp copasi/report/CKeyFactory.cpp.new + mv copasi/report/CKeyFactory.cpp.new copasi/report/CKeyFactory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + touch -r copasi/report/CDataHandler.cpp copasi/report/CDataHandler.cpp.new + mv copasi/report/CDataHandler.cpp.new copasi/report/CDataHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + touch -r copasi/randomGenerator/Cr250.cpp copasi/randomGenerator/Cr250.cpp.new + mv copasi/randomGenerator/Cr250.cpp.new copasi/randomGenerator/Cr250.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + touch -r copasi/randomGenerator/Cmt19937.cpp copasi/randomGenerator/Cmt19937.cpp.new + mv copasi/randomGenerator/Cmt19937.cpp.new copasi/randomGenerator/Cmt19937.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + touch -r copasi/randomGenerator/CRandom.cpp copasi/randomGenerator/CRandom.cpp.new + mv copasi/randomGenerator/CRandom.cpp.new copasi/randomGenerator/CRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + touch -r copasi/randomGenerator/CPermutation.cpp copasi/randomGenerator/CPermutation.cpp.new + mv copasi/randomGenerator/CPermutation.cpp.new copasi/randomGenerator/CPermutation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + touch -r copasi/qlayout/CQZoomableView.cpp copasi/qlayout/CQZoomableView.cpp.new + mv copasi/qlayout/CQZoomableView.cpp.new copasi/qlayout/CQZoomableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + touch -r copasi/qlayout/CQStyledGraphicsItem.cpp copasi/qlayout/CQStyledGraphicsItem.cpp.new + mv copasi/qlayout/CQStyledGraphicsItem.cpp.new copasi/qlayout/CQStyledGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + touch -r copasi/qlayout/CQRoundedRect.cpp copasi/qlayout/CQRoundedRect.cpp.new + mv copasi/qlayout/CQRoundedRect.cpp.new copasi/qlayout/CQRoundedRect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + touch -r copasi/qlayout/CQRenderConverter.cpp copasi/qlayout/CQRenderConverter.cpp.new + mv copasi/qlayout/CQRenderConverter.cpp.new copasi/qlayout/CQRenderConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + touch -r copasi/qlayout/CQLayoutView.cpp copasi/qlayout/CQLayoutView.cpp.new + mv copasi/qlayout/CQLayoutView.cpp.new copasi/qlayout/CQLayoutView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + touch -r copasi/qlayout/CQLayoutScene.cpp copasi/qlayout/CQLayoutScene.cpp.new + mv copasi/qlayout/CQLayoutScene.cpp.new copasi/qlayout/CQLayoutScene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + touch -r copasi/qlayout/CQLabelGraphicsItem.cpp copasi/qlayout/CQLabelGraphicsItem.cpp.new + mv copasi/qlayout/CQLabelGraphicsItem.cpp.new copasi/qlayout/CQLabelGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + touch -r copasi/qlayout/CQElementProperties.cpp copasi/qlayout/CQElementProperties.cpp.new + mv copasi/qlayout/CQElementProperties.cpp.new copasi/qlayout/CQElementProperties.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + touch -r copasi/qlayout/CQEffectDescriptionEdit.cpp copasi/qlayout/CQEffectDescriptionEdit.cpp.new + mv copasi/qlayout/CQEffectDescriptionEdit.cpp.new copasi/qlayout/CQEffectDescriptionEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + touch -r copasi/qlayout/CQEffectDescription.cpp copasi/qlayout/CQEffectDescription.cpp.new + mv copasi/qlayout/CQEffectDescription.cpp.new copasi/qlayout/CQEffectDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + touch -r copasi/qlayout/CQCopasiGraphicsItem.cpp copasi/qlayout/CQCopasiGraphicsItem.cpp.new + mv copasi/qlayout/CQCopasiGraphicsItem.cpp.new copasi/qlayout/CQCopasiGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + touch -r copasi/qlayout/CQCopasiEffect.cpp copasi/qlayout/CQCopasiEffect.cpp.new + mv copasi/qlayout/CQCopasiEffect.cpp.new copasi/qlayout/CQCopasiEffect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + touch -r copasi/qlayout/CQCopasiAnimation.cpp copasi/qlayout/CQCopasiAnimation.cpp.new + mv copasi/qlayout/CQCopasiAnimation.cpp.new copasi/qlayout/CQCopasiAnimation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + touch -r copasi/qlayout/CQConnectionGraphicsItem.cpp copasi/qlayout/CQConnectionGraphicsItem.cpp.new + mv copasi/qlayout/CQConnectionGraphicsItem.cpp.new copasi/qlayout/CQConnectionGraphicsItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + touch -r copasi/qlayout/CQAnimationWindow.cpp copasi/qlayout/CQAnimationWindow.cpp.new + mv copasi/qlayout/CQAnimationWindow.cpp.new copasi/qlayout/CQAnimationWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + touch -r copasi/qlayout/CQAnimationSettingsEditor.cpp copasi/qlayout/CQAnimationSettingsEditor.cpp.new + mv copasi/qlayout/CQAnimationSettingsEditor.cpp.new copasi/qlayout/CQAnimationSettingsEditor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + touch -r copasi/qlayout/CQAnimationControls.cpp copasi/qlayout/CQAnimationControls.cpp.new + mv copasi/qlayout/CQAnimationControls.cpp.new copasi/qlayout/CQAnimationControls.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + touch -r copasi/pvmtest/pvmtest.cpp copasi/pvmtest/pvmtest.cpp.new + mv copasi/pvmtest/pvmtest.cpp.new copasi/pvmtest/pvmtest.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + touch -r copasi/plotUI/scrollzoomer.cpp copasi/plotUI/scrollzoomer.cpp.new + mv copasi/plotUI/scrollzoomer.cpp.new copasi/plotUI/scrollzoomer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + touch -r copasi/plotUI/scrollbar.cpp copasi/plotUI/scrollbar.cpp.new + mv copasi/plotUI/scrollbar.cpp.new copasi/plotUI/scrollbar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + touch -r copasi/plotUI/plotwindow.cpp copasi/plotUI/plotwindow.cpp.new + mv copasi/plotUI/plotwindow.cpp.new copasi/plotUI/plotwindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + touch -r copasi/plotUI/curve2dwidget.cpp copasi/plotUI/curve2dwidget.cpp.new + mv copasi/plotUI/curve2dwidget.cpp.new copasi/plotUI/curve2dwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + touch -r copasi/plotUI/HistoWidget.cpp copasi/plotUI/HistoWidget.cpp.new + mv copasi/plotUI/HistoWidget.cpp.new copasi/plotUI/HistoWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + touch -r copasi/plotUI/CSpectorgramData.cpp copasi/plotUI/CSpectorgramData.cpp.new + mv copasi/plotUI/CSpectorgramData.cpp.new copasi/plotUI/CSpectorgramData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + touch -r copasi/plotUI/CQwtPlot.cpp copasi/plotUI/CQwtPlot.cpp.new + mv copasi/plotUI/CQwtPlot.cpp.new copasi/plotUI/CQwtPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + touch -r copasi/plotUI/CQtChartsPlot.cpp copasi/plotUI/CQtChartsPlot.cpp.new + mv copasi/plotUI/CQtChartsPlot.cpp.new copasi/plotUI/CQtChartsPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + touch -r copasi/plotUI/CQSpectogramWidget.cpp copasi/plotUI/CQSpectogramWidget.cpp.new + mv copasi/plotUI/CQSpectogramWidget.cpp.new copasi/plotUI/CQSpectogramWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + touch -r copasi/plotUI/CQPlotSubwidget.cpp copasi/plotUI/CQPlotSubwidget.cpp.new + mv copasi/plotUI/CQPlotSubwidget.cpp.new copasi/plotUI/CQPlotSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + touch -r copasi/plotUI/CQPlotEditWidget.cpp copasi/plotUI/CQPlotEditWidget.cpp.new + mv copasi/plotUI/CQPlotEditWidget.cpp.new copasi/plotUI/CQPlotEditWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + touch -r copasi/plotUI/CQPlotColors.cpp copasi/plotUI/CQPlotColors.cpp.new + mv copasi/plotUI/CQPlotColors.cpp.new copasi/plotUI/CQPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + touch -r copasi/plotUI/CQMarchingSquares.cpp copasi/plotUI/CQMarchingSquares.cpp.new + mv copasi/plotUI/CQMarchingSquares.cpp.new copasi/plotUI/CQMarchingSquares.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + touch -r copasi/plotUI/CQExtender.cpp copasi/plotUI/CQExtender.cpp.new + mv copasi/plotUI/CQExtender.cpp.new copasi/plotUI/CQExtender.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + touch -r copasi/plotUI/CQDataVizPlot.cpp copasi/plotUI/CQDataVizPlot.cpp.new + mv copasi/plotUI/CQDataVizPlot.cpp.new copasi/plotUI/CQDataVizPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + touch -r copasi/plotUI/CQCustomPlot.cpp copasi/plotUI/CQCustomPlot.cpp.new + mv copasi/plotUI/CQCustomPlot.cpp.new copasi/plotUI/CQCustomPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + touch -r copasi/plotUI/CQAdvancedPlotSettings.cpp copasi/plotUI/CQAdvancedPlotSettings.cpp.new + mv copasi/plotUI/CQAdvancedPlotSettings.cpp.new copasi/plotUI/CQAdvancedPlotSettings.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + touch -r copasi/plotUI/CPlotSpectogram.cpp copasi/plotUI/CPlotSpectogram.cpp.new + mv copasi/plotUI/CPlotSpectogram.cpp.new copasi/plotUI/CPlotSpectogram.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + touch -r copasi/plotUI/CPlotInterface.cpp copasi/plotUI/CPlotInterface.cpp.new + mv copasi/plotUI/CPlotInterface.cpp.new copasi/plotUI/CPlotInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + touch -r copasi/plotUI/COutputHandlerPlot.cpp copasi/plotUI/COutputHandlerPlot.cpp.new + mv copasi/plotUI/COutputHandlerPlot.cpp.new copasi/plotUI/COutputHandlerPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + touch -r copasi/plotUI/CLinearColorMap.cpp copasi/plotUI/CLinearColorMap.cpp.new + mv copasi/plotUI/CLinearColorMap.cpp.new copasi/plotUI/CLinearColorMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + touch -r copasi/plotUI/CHistoCurveData.cpp copasi/plotUI/CHistoCurveData.cpp.new + mv copasi/plotUI/CHistoCurveData.cpp.new copasi/plotUI/CHistoCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + touch -r copasi/plotUI/CBandedGraphData.cpp copasi/plotUI/CBandedGraphData.cpp.new + mv copasi/plotUI/CBandedGraphData.cpp.new copasi/plotUI/CBandedGraphData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + touch -r copasi/plotUI/C2DPlotCurve.cpp copasi/plotUI/C2DPlotCurve.cpp.new + mv copasi/plotUI/C2DPlotCurve.cpp.new copasi/plotUI/C2DPlotCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + touch -r copasi/plotUI/C2DCurveData.cpp copasi/plotUI/C2DCurveData.cpp.new + mv copasi/plotUI/C2DCurveData.cpp.new copasi/plotUI/C2DCurveData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + touch -r copasi/plotUI/BandedGraphWidget.cpp copasi/plotUI/BandedGraphWidget.cpp.new + mv copasi/plotUI/BandedGraphWidget.cpp.new copasi/plotUI/BandedGraphWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + touch -r copasi/plot/CPlotSpecification.cpp copasi/plot/CPlotSpecification.cpp.new + mv copasi/plot/CPlotSpecification.cpp.new copasi/plot/CPlotSpecification.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + touch -r copasi/plot/CPlotItem.cpp copasi/plot/CPlotItem.cpp.new + mv copasi/plot/CPlotItem.cpp.new copasi/plot/CPlotItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + touch -r copasi/plot/CPlotColors.cpp copasi/plot/CPlotColors.cpp.new + mv copasi/plot/CPlotColors.cpp.new copasi/plot/CPlotColors.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + touch -r copasi/plot/COutputDefinitionVector.cpp copasi/plot/COutputDefinitionVector.cpp.new + mv copasi/plot/COutputDefinitionVector.cpp.new copasi/plot/COutputDefinitionVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + touch -r copasi/parameterFitting/CFitTask.cpp copasi/parameterFitting/CFitTask.cpp.new + mv copasi/parameterFitting/CFitTask.cpp.new copasi/parameterFitting/CFitTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + touch -r copasi/parameterFitting/CFitProblem.cpp copasi/parameterFitting/CFitProblem.cpp.new + mv copasi/parameterFitting/CFitProblem.cpp.new copasi/parameterFitting/CFitProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + touch -r copasi/parameterFitting/CFitItem.cpp copasi/parameterFitting/CFitItem.cpp.new + mv copasi/parameterFitting/CFitItem.cpp.new copasi/parameterFitting/CFitItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + touch -r copasi/parameterFitting/CExperimentSet.cpp copasi/parameterFitting/CExperimentSet.cpp.new + mv copasi/parameterFitting/CExperimentSet.cpp.new copasi/parameterFitting/CExperimentSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + touch -r copasi/parameterFitting/CExperimentObjectMap.cpp copasi/parameterFitting/CExperimentObjectMap.cpp.new + mv copasi/parameterFitting/CExperimentObjectMap.cpp.new copasi/parameterFitting/CExperimentObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + touch -r copasi/parameterFitting/CExperimentFileInfo.cpp copasi/parameterFitting/CExperimentFileInfo.cpp.new + mv copasi/parameterFitting/CExperimentFileInfo.cpp.new copasi/parameterFitting/CExperimentFileInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + touch -r copasi/parameterFitting/CExperiment.cpp copasi/parameterFitting/CExperiment.cpp.new + mv copasi/parameterFitting/CExperiment.cpp.new copasi/parameterFitting/CExperiment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + touch -r copasi/output/COutputHandler.cpp copasi/output/COutputHandler.cpp.new + mv copasi/output/COutputHandler.cpp.new copasi/output/COutputHandler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + touch -r copasi/oscillation/COscillationTask.cpp copasi/oscillation/COscillationTask.cpp.new + mv copasi/oscillation/COscillationTask.cpp.new copasi/oscillation/COscillationTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + touch -r copasi/oscillation/COscillationProblem.cpp copasi/oscillation/COscillationProblem.cpp.new + mv copasi/oscillation/COscillationProblem.cpp.new copasi/oscillation/COscillationProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + touch -r copasi/oscillation/COscillationMethodIntegrate.cpp copasi/oscillation/COscillationMethodIntegrate.cpp.new + mv copasi/oscillation/COscillationMethodIntegrate.cpp.new copasi/oscillation/COscillationMethodIntegrate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + touch -r copasi/oscillation/COscillationMethod.cpp copasi/oscillation/COscillationMethod.cpp.new + mv copasi/oscillation/COscillationMethod.cpp.new copasi/oscillation/COscillationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + touch -r copasi/optimization/FminBrent.cpp copasi/optimization/FminBrent.cpp.new + mv copasi/optimization/FminBrent.cpp.new copasi/optimization/FminBrent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + touch -r copasi/optimization/CTruncatedNewton.cpp copasi/optimization/CTruncatedNewton.cpp.new + mv copasi/optimization/CTruncatedNewton.cpp.new copasi/optimization/CTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + touch -r copasi/optimization/CRealProblem.cpp copasi/optimization/CRealProblem.cpp.new + mv copasi/optimization/CRealProblem.cpp.new copasi/optimization/CRealProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + touch -r copasi/optimization/CRandomSearch.cpp copasi/optimization/CRandomSearch.cpp.new + mv copasi/optimization/CRandomSearch.cpp.new copasi/optimization/CRandomSearch.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + touch -r copasi/optimization/CPraxis.cpp copasi/optimization/CPraxis.cpp.new + mv copasi/optimization/CPraxis.cpp.new copasi/optimization/CPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + touch -r copasi/optimization/COptTask.cpp copasi/optimization/COptTask.cpp.new + mv copasi/optimization/COptTask.cpp.new copasi/optimization/COptTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + touch -r copasi/optimization/COptProblem.cpp copasi/optimization/COptProblem.cpp.new + mv copasi/optimization/COptProblem.cpp.new copasi/optimization/COptProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + touch -r copasi/optimization/COptPopulationMethod.cpp copasi/optimization/COptPopulationMethod.cpp.new + mv copasi/optimization/COptPopulationMethod.cpp.new copasi/optimization/COptPopulationMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + touch -r copasi/optimization/COptMethodTruncatedNewton.cpp copasi/optimization/COptMethodTruncatedNewton.cpp.new + mv copasi/optimization/COptMethodTruncatedNewton.cpp.new copasi/optimization/COptMethodTruncatedNewton.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + touch -r copasi/optimization/COptMethodSteepestDescent.cpp copasi/optimization/COptMethodSteepestDescent.cpp.new + mv copasi/optimization/COptMethodSteepestDescent.cpp.new copasi/optimization/COptMethodSteepestDescent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + touch -r copasi/optimization/COptMethodStatistics.cpp copasi/optimization/COptMethodStatistics.cpp.new + mv copasi/optimization/COptMethodStatistics.cpp.new copasi/optimization/COptMethodStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + touch -r copasi/optimization/COptMethodSS.cpp copasi/optimization/COptMethodSS.cpp.new + mv copasi/optimization/COptMethodSS.cpp.new copasi/optimization/COptMethodSS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + touch -r copasi/optimization/COptMethodSRES.cpp copasi/optimization/COptMethodSRES.cpp.new + mv copasi/optimization/COptMethodSRES.cpp.new copasi/optimization/COptMethodSRES.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + touch -r copasi/optimization/COptMethodSA.cpp copasi/optimization/COptMethodSA.cpp.new + mv copasi/optimization/COptMethodSA.cpp.new copasi/optimization/COptMethodSA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + touch -r copasi/optimization/COptMethodPraxis.cpp copasi/optimization/COptMethodPraxis.cpp.new + mv copasi/optimization/COptMethodPraxis.cpp.new copasi/optimization/COptMethodPraxis.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + touch -r copasi/optimization/COptMethodPS.cpp copasi/optimization/COptMethodPS.cpp.new + mv copasi/optimization/COptMethodPS.cpp.new copasi/optimization/COptMethodPS.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + touch -r copasi/optimization/COptMethodNelderMead.cpp copasi/optimization/COptMethodNelderMead.cpp.new + mv copasi/optimization/COptMethodNelderMead.cpp.new copasi/optimization/COptMethodNelderMead.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + touch -r copasi/optimization/COptMethodNL2SOL.cpp copasi/optimization/COptMethodNL2SOL.cpp.new + mv copasi/optimization/COptMethodNL2SOL.cpp.new copasi/optimization/COptMethodNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + touch -r copasi/optimization/COptMethodLevenbergMarquardt.cpp copasi/optimization/COptMethodLevenbergMarquardt.cpp.new + mv copasi/optimization/COptMethodLevenbergMarquardt.cpp.new copasi/optimization/COptMethodLevenbergMarquardt.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + touch -r copasi/optimization/COptMethodHookeJeeves.cpp copasi/optimization/COptMethodHookeJeeves.cpp.new + mv copasi/optimization/COptMethodHookeJeeves.cpp.new copasi/optimization/COptMethodHookeJeeves.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + touch -r copasi/optimization/COptMethodGASR.cpp copasi/optimization/COptMethodGASR.cpp.new + mv copasi/optimization/COptMethodGASR.cpp.new copasi/optimization/COptMethodGASR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + touch -r copasi/optimization/COptMethodGA.cpp copasi/optimization/COptMethodGA.cpp.new + mv copasi/optimization/COptMethodGA.cpp.new copasi/optimization/COptMethodGA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + touch -r copasi/optimization/COptMethodEP.cpp copasi/optimization/COptMethodEP.cpp.new + mv copasi/optimization/COptMethodEP.cpp.new copasi/optimization/COptMethodEP.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + touch -r copasi/optimization/COptMethodDE.cpp copasi/optimization/COptMethodDE.cpp.new + mv copasi/optimization/COptMethodDE.cpp.new copasi/optimization/COptMethodDE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + touch -r copasi/optimization/COptMethodCoranaWalk.cpp copasi/optimization/COptMethodCoranaWalk.cpp.new + mv copasi/optimization/COptMethodCoranaWalk.cpp.new copasi/optimization/COptMethodCoranaWalk.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + touch -r copasi/optimization/COptMethod.cpp copasi/optimization/COptMethod.cpp.new + mv copasi/optimization/COptMethod.cpp.new copasi/optimization/COptMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + touch -r copasi/optimization/COptLogItem.cpp copasi/optimization/COptLogItem.cpp.new + mv copasi/optimization/COptLogItem.cpp.new copasi/optimization/COptLogItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + touch -r copasi/optimization/COptLogEntry.cpp copasi/optimization/COptLogEntry.cpp.new + mv copasi/optimization/COptLogEntry.cpp.new copasi/optimization/COptLogEntry.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + touch -r copasi/optimization/COptLog.cpp copasi/optimization/COptLog.cpp.new + mv copasi/optimization/COptLog.cpp.new copasi/optimization/COptLog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + touch -r copasi/optimization/COptItem.cpp copasi/optimization/COptItem.cpp.new + mv copasi/optimization/COptItem.cpp.new copasi/optimization/COptItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + touch -r copasi/optimization/CNL2SOL.cpp copasi/optimization/CNL2SOL.cpp.new + mv copasi/optimization/CNL2SOL.cpp.new copasi/optimization/CNL2SOL.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + touch -r copasi/odepack++/dstoda.cpp copasi/odepack++/dstoda.cpp.new + mv copasi/odepack++/dstoda.cpp.new copasi/odepack++/dstoda.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + touch -r copasi/odepack++/dsolsy.cpp copasi/odepack++/dsolsy.cpp.new + mv copasi/odepack++/dsolsy.cpp.new copasi/odepack++/dsolsy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + touch -r copasi/odepack++/drcheck.cpp copasi/odepack++/drcheck.cpp.new + mv copasi/odepack++/drcheck.cpp.new copasi/odepack++/drcheck.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + touch -r copasi/odepack++/dprja.cpp copasi/odepack++/dprja.cpp.new + mv copasi/odepack++/dprja.cpp.new copasi/odepack++/dprja.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + touch -r copasi/odepack++/dmnorm.cpp copasi/odepack++/dmnorm.cpp.new + mv copasi/odepack++/dmnorm.cpp.new copasi/odepack++/dmnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + touch -r copasi/odepack++/dintdy.cpp copasi/odepack++/dintdy.cpp.new + mv copasi/odepack++/dintdy.cpp.new copasi/odepack++/dintdy.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + touch -r copasi/odepack++/dfnorm.cpp copasi/odepack++/dfnorm.cpp.new + mv copasi/odepack++/dfnorm.cpp.new copasi/odepack++/dfnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + touch -r copasi/odepack++/dewset.cpp copasi/odepack++/dewset.cpp.new + mv copasi/odepack++/dewset.cpp.new copasi/odepack++/dewset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + touch -r copasi/odepack++/decsol.cpp copasi/odepack++/decsol.cpp.new + mv copasi/odepack++/decsol.cpp.new copasi/odepack++/decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + touch -r copasi/odepack++/dcfode.cpp copasi/odepack++/dcfode.cpp.new + mv copasi/odepack++/dcfode.cpp.new copasi/odepack++/dcfode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + touch -r copasi/odepack++/dc_decsol.cpp copasi/odepack++/dc_decsol.cpp.new + mv copasi/odepack++/dc_decsol.cpp.new copasi/odepack++/dc_decsol.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + touch -r copasi/odepack++/dbnorm.cpp copasi/odepack++/dbnorm.cpp.new + mv copasi/odepack++/dbnorm.cpp.new copasi/odepack++/dbnorm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + touch -r copasi/odepack++/common.cpp copasi/odepack++/common.cpp.new + mv copasi/odepack++/common.cpp.new copasi/odepack++/common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + touch -r copasi/odepack++/Cxerrwd.cpp copasi/odepack++/Cxerrwd.cpp.new + mv copasi/odepack++/Cxerrwd.cpp.new copasi/odepack++/Cxerrwd.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + touch -r copasi/odepack++/CRadau5.cpp copasi/odepack++/CRadau5.cpp.new + mv copasi/odepack++/CRadau5.cpp.new copasi/odepack++/CRadau5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + touch -r copasi/odepack++/CLSODAR.cpp copasi/odepack++/CLSODAR.cpp.new + mv copasi/odepack++/CLSODAR.cpp.new copasi/odepack++/CLSODAR.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + touch -r copasi/odepack++/CLSODA.cpp copasi/odepack++/CLSODA.cpp.new + mv copasi/odepack++/CLSODA.cpp.new copasi/odepack++/CLSODA.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + touch -r copasi/odepack++/CInternalSolver.cpp copasi/odepack++/CInternalSolver.cpp.new + mv copasi/odepack++/CInternalSolver.cpp.new copasi/odepack++/CInternalSolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + touch -r copasi/moieties/CMoietiesTask.cpp copasi/moieties/CMoietiesTask.cpp.new + mv copasi/moieties/CMoietiesTask.cpp.new copasi/moieties/CMoietiesTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + touch -r copasi/moieties/CMoietiesProblem.cpp copasi/moieties/CMoietiesProblem.cpp.new + mv copasi/moieties/CMoietiesProblem.cpp.new copasi/moieties/CMoietiesProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + touch -r copasi/moieties/CMoietiesMethod.cpp copasi/moieties/CMoietiesMethod.cpp.new + mv copasi/moieties/CMoietiesMethod.cpp.new copasi/moieties/CMoietiesMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CState.cpp.new copasi/model/CState.cpp + touch -r copasi/model/CState.cpp copasi/model/CState.cpp.new + mv copasi/model/CState.cpp.new copasi/model/CState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + touch -r copasi/model/CReactionInterface.cpp copasi/model/CReactionInterface.cpp.new + mv copasi/model/CReactionInterface.cpp.new copasi/model/CReactionInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + touch -r copasi/model/CReaction.cpp copasi/model/CReaction.cpp.new + mv copasi/model/CReaction.cpp.new copasi/model/CReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + touch -r copasi/model/CObjectLists.cpp copasi/model/CObjectLists.cpp.new + mv copasi/model/CObjectLists.cpp.new copasi/model/CObjectLists.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + touch -r copasi/model/CMoiety.cpp copasi/model/CMoiety.cpp.new + mv copasi/model/CMoiety.cpp.new copasi/model/CMoiety.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + touch -r copasi/model/CModelValue.cpp copasi/model/CModelValue.cpp.new + mv copasi/model/CModelValue.cpp.new copasi/model/CModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + touch -r copasi/model/CModelParameterSet.cpp copasi/model/CModelParameterSet.cpp.new + mv copasi/model/CModelParameterSet.cpp.new copasi/model/CModelParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + touch -r copasi/model/CModelParameterGroup.cpp copasi/model/CModelParameterGroup.cpp.new + mv copasi/model/CModelParameterGroup.cpp.new copasi/model/CModelParameterGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + touch -r copasi/model/CModelParameter.cpp copasi/model/CModelParameter.cpp.new + mv copasi/model/CModelParameter.cpp.new copasi/model/CModelParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + touch -r copasi/model/CModelMerging.cpp copasi/model/CModelMerging.cpp.new + mv copasi/model/CModelMerging.cpp.new copasi/model/CModelMerging.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + touch -r copasi/model/CModelExpansion.cpp copasi/model/CModelExpansion.cpp.new + mv copasi/model/CModelExpansion.cpp.new copasi/model/CModelExpansion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + touch -r copasi/model/CModelAnalyzer.cpp copasi/model/CModelAnalyzer.cpp.new + mv copasi/model/CModelAnalyzer.cpp.new copasi/model/CModelAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CModel.cpp.new copasi/model/CModel.cpp + touch -r copasi/model/CModel.cpp copasi/model/CModel.cpp.new + mv copasi/model/CModel.cpp.new copasi/model/CModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + touch -r copasi/model/CMetabNameInterface.cpp copasi/model/CMetabNameInterface.cpp.new + mv copasi/model/CMetabNameInterface.cpp.new copasi/model/CMetabNameInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + touch -r copasi/model/CMetab.cpp copasi/model/CMetab.cpp.new + mv copasi/model/CMetab.cpp.new copasi/model/CMetab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + touch -r copasi/model/CMMLOutput.cpp copasi/model/CMMLOutput.cpp.new + mv copasi/model/CMMLOutput.cpp.new copasi/model/CMMLOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + touch -r copasi/model/CEvent.cpp copasi/model/CEvent.cpp.new + mv copasi/model/CEvent.cpp.new copasi/model/CEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + touch -r copasi/model/CCompartment.cpp copasi/model/CCompartment.cpp.new + mv copasi/model/CCompartment.cpp.new copasi/model/CCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + touch -r copasi/model/CChemEqParser_yacc.cpp copasi/model/CChemEqParser_yacc.cpp.new + mv copasi/model/CChemEqParser_yacc.cpp.new copasi/model/CChemEqParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + touch -r copasi/model/CChemEqParser_lex.cpp copasi/model/CChemEqParser_lex.cpp.new + mv copasi/model/CChemEqParser_lex.cpp.new copasi/model/CChemEqParser_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + touch -r copasi/model/CChemEqParser.cpp copasi/model/CChemEqParser.cpp.new + mv copasi/model/CChemEqParser.cpp.new copasi/model/CChemEqParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + touch -r copasi/model/CChemEqInterface.cpp copasi/model/CChemEqInterface.cpp.new + mv copasi/model/CChemEqInterface.cpp.new copasi/model/CChemEqInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + touch -r copasi/model/CChemEqElement.cpp copasi/model/CChemEqElement.cpp.new + mv copasi/model/CChemEqElement.cpp.new copasi/model/CChemEqElement.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + touch -r copasi/model/CChemEq.cpp copasi/model/CChemEq.cpp.new + mv copasi/model/CChemEq.cpp.new copasi/model/CChemEq.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + touch -r copasi/model/CAnnotation.cpp copasi/model/CAnnotation.cpp.new + mv copasi/model/CAnnotation.cpp.new copasi/model/CAnnotation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + touch -r copasi/miase/CMiaseTask.cpp copasi/miase/CMiaseTask.cpp.new + mv copasi/miase/CMiaseTask.cpp.new copasi/miase/CMiaseTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + touch -r copasi/miase/CMiaseSimulation.cpp copasi/miase/CMiaseSimulation.cpp.new + mv copasi/miase/CMiaseSimulation.cpp.new copasi/miase/CMiaseSimulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + touch -r copasi/miase/CMiaseParser.cpp copasi/miase/CMiaseParser.cpp.new + mv copasi/miase/CMiaseParser.cpp.new copasi/miase/CMiaseParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + touch -r copasi/miase/CMiaseOutput.cpp copasi/miase/CMiaseOutput.cpp.new + mv copasi/miase/CMiaseOutput.cpp.new copasi/miase/CMiaseOutput.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + touch -r copasi/miase/CMiaseModel.cpp copasi/miase/CMiaseModel.cpp.new + mv copasi/miase/CMiaseModel.cpp.new copasi/miase/CMiaseModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + touch -r copasi/miase/CMiaseML.cpp copasi/miase/CMiaseML.cpp.new + mv copasi/miase/CMiaseML.cpp.new copasi/miase/CMiaseML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + touch -r copasi/miase/CMiaseBase.cpp copasi/miase/CMiaseBase.cpp.new + mv copasi/miase/CMiaseBase.cpp.new copasi/miase/CMiaseBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + touch -r copasi/math/CMathUpdateSequence.cpp copasi/math/CMathUpdateSequence.cpp.new + mv copasi/math/CMathUpdateSequence.cpp.new copasi/math/CMathUpdateSequence.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + touch -r copasi/math/CMathReaction.cpp copasi/math/CMathReaction.cpp.new + mv copasi/math/CMathReaction.cpp.new copasi/math/CMathReaction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + touch -r copasi/math/CMathObject.cpp copasi/math/CMathObject.cpp.new + mv copasi/math/CMathObject.cpp.new copasi/math/CMathObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + touch -r copasi/math/CMathHistory.cpp copasi/math/CMathHistory.cpp.new + mv copasi/math/CMathHistory.cpp.new copasi/math/CMathHistory.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + touch -r copasi/math/CMathExpression.cpp copasi/math/CMathExpression.cpp.new + mv copasi/math/CMathExpression.cpp.new copasi/math/CMathExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + touch -r copasi/math/CMathEventQueue.cpp copasi/math/CMathEventQueue.cpp.new + mv copasi/math/CMathEventQueue.cpp.new copasi/math/CMathEventQueue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + touch -r copasi/math/CMathEvent.cpp copasi/math/CMathEvent.cpp.new + mv copasi/math/CMathEvent.cpp.new copasi/math/CMathEvent.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + touch -r copasi/math/CMathEnum.cpp copasi/math/CMathEnum.cpp.new + mv copasi/math/CMathEnum.cpp.new copasi/math/CMathEnum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + touch -r copasi/math/CMathDerive.cpp copasi/math/CMathDerive.cpp.new + mv copasi/math/CMathDerive.cpp.new copasi/math/CMathDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + touch -r copasi/math/CMathDependencyNodeIterator.cpp copasi/math/CMathDependencyNodeIterator.cpp.new + mv copasi/math/CMathDependencyNodeIterator.cpp.new copasi/math/CMathDependencyNodeIterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + touch -r copasi/math/CMathDependencyNode.cpp copasi/math/CMathDependencyNode.cpp.new + mv copasi/math/CMathDependencyNode.cpp.new copasi/math/CMathDependencyNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + touch -r copasi/math/CMathDependencyGraph.cpp copasi/math/CMathDependencyGraph.cpp.new + mv copasi/math/CMathDependencyGraph.cpp.new copasi/math/CMathDependencyGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + touch -r copasi/math/CMathDelay.cpp copasi/math/CMathDelay.cpp.new + mv copasi/math/CMathDelay.cpp.new copasi/math/CMathDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + touch -r copasi/math/CMathContainer.cpp copasi/math/CMathContainer.cpp.new + mv copasi/math/CMathContainer.cpp.new copasi/math/CMathContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + touch -r copasi/math/CJitExpression.cpp copasi/math/CJitExpression.cpp.new + mv copasi/math/CJitExpression.cpp.new copasi/math/CJitExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + touch -r copasi/math/CJitCompilerImplementation.cpp copasi/math/CJitCompilerImplementation.cpp.new + mv copasi/math/CJitCompilerImplementation.cpp.new copasi/math/CJitCompilerImplementation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + touch -r copasi/math/CJitCompiler.cpp copasi/math/CJitCompiler.cpp.new + mv copasi/math/CJitCompiler.cpp.new copasi/math/CJitCompiler.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + touch -r copasi/lyap/CLyapWolfMethod.cpp copasi/lyap/CLyapWolfMethod.cpp.new + mv copasi/lyap/CLyapWolfMethod.cpp.new copasi/lyap/CLyapWolfMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + touch -r copasi/lyap/CLyapTask.cpp copasi/lyap/CLyapTask.cpp.new + mv copasi/lyap/CLyapTask.cpp.new copasi/lyap/CLyapTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + touch -r copasi/lyap/CLyapProblem.cpp copasi/lyap/CLyapProblem.cpp.new + mv copasi/lyap/CLyapProblem.cpp.new copasi/lyap/CLyapProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + touch -r copasi/lyap/CLyapMethod.cpp copasi/lyap/CLyapMethod.cpp.new + mv copasi/lyap/CLyapMethod.cpp.new copasi/lyap/CLyapMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + touch -r copasi/lna/CLNATask.cpp copasi/lna/CLNATask.cpp.new + mv copasi/lna/CLNATask.cpp.new copasi/lna/CLNATask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + touch -r copasi/lna/CLNAProblem.cpp copasi/lna/CLNAProblem.cpp.new + mv copasi/lna/CLNAProblem.cpp.new copasi/lna/CLNAProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + touch -r copasi/lna/CLNAMethod.cpp copasi/lna/CLNAMethod.cpp.new + mv copasi/lna/CLNAMethod.cpp.new copasi/lna/CLNAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + touch -r copasi/layoutUI/RGTextureSpec.cpp copasi/layoutUI/RGTextureSpec.cpp.new + mv copasi/layoutUI/RGTextureSpec.cpp.new copasi/layoutUI/RGTextureSpec.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + touch -r copasi/layoutUI/ParaPanel.cpp copasi/layoutUI/ParaPanel.cpp.new + mv copasi/layoutUI/ParaPanel.cpp.new copasi/layoutUI/ParaPanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + touch -r copasi/layoutUI/NodeSizePanel.cpp copasi/layoutUI/NodeSizePanel.cpp.new + mv copasi/layoutUI/NodeSizePanel.cpp.new copasi/layoutUI/NodeSizePanel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + touch -r copasi/layoutUI/FontChooser.cpp copasi/layoutUI/FontChooser.cpp.new + mv copasi/layoutUI/FontChooser.cpp.new copasi/layoutUI/FontChooser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + touch -r copasi/layoutUI/CVisParameters.cpp copasi/layoutUI/CVisParameters.cpp.new + mv copasi/layoutUI/CVisParameters.cpp.new copasi/layoutUI/CVisParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + touch -r copasi/layoutUI/CSimSummaryInfo.cpp copasi/layoutUI/CSimSummaryInfo.cpp.new + mv copasi/layoutUI/CSimSummaryInfo.cpp.new copasi/layoutUI/CSimSummaryInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + touch -r copasi/layoutUI/CQSpringLayoutParameterWindow.cpp copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new + mv copasi/layoutUI/CQSpringLayoutParameterWindow.cpp.new copasi/layoutUI/CQSpringLayoutParameterWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + touch -r copasi/layoutUI/CQScreenshotOptionsDialog.cpp copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new + mv copasi/layoutUI/CQScreenshotOptionsDialog.cpp.new copasi/layoutUI/CQScreenshotOptionsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + touch -r copasi/layoutUI/CQQtImageTexturizer.cpp copasi/layoutUI/CQQtImageTexturizer.cpp.new + mv copasi/layoutUI/CQQtImageTexturizer.cpp.new copasi/layoutUI/CQQtImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + touch -r copasi/layoutUI/CQPlayerControlWidget.cpp copasi/layoutUI/CQPlayerControlWidget.cpp.new + mv copasi/layoutUI/CQPlayerControlWidget.cpp.new copasi/layoutUI/CQPlayerControlWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + touch -r copasi/layoutUI/CQNewMainWindow.cpp copasi/layoutUI/CQNewMainWindow.cpp.new + mv copasi/layoutUI/CQNewMainWindow.cpp.new copasi/layoutUI/CQNewMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + touch -r copasi/layoutUI/CQLayoutThread.cpp copasi/layoutUI/CQLayoutThread.cpp.new + mv copasi/layoutUI/CQLayoutThread.cpp.new copasi/layoutUI/CQLayoutThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + touch -r copasi/layoutUI/CQLayoutMainWindow.cpp copasi/layoutUI/CQLayoutMainWindow.cpp.new + mv copasi/layoutUI/CQLayoutMainWindow.cpp.new copasi/layoutUI/CQLayoutMainWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + touch -r copasi/layoutUI/CQGLViewport.cpp copasi/layoutUI/CQGLViewport.cpp.new + mv copasi/layoutUI/CQGLViewport.cpp.new copasi/layoutUI/CQGLViewport.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + touch -r copasi/layoutUI/CQGLNetworkPainter.cpp copasi/layoutUI/CQGLNetworkPainter.cpp.new + mv copasi/layoutUI/CQGLNetworkPainter.cpp.new copasi/layoutUI/CQGLNetworkPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + touch -r copasi/layoutUI/CQGLLayoutViewer.cpp copasi/layoutUI/CQGLLayoutViewer.cpp.new + mv copasi/layoutUI/CQGLLayoutViewer.cpp.new copasi/layoutUI/CQGLLayoutViewer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + touch -r copasi/layoutUI/CQGLLayoutPainter.cpp copasi/layoutUI/CQGLLayoutPainter.cpp.new + mv copasi/layoutUI/CQGLLayoutPainter.cpp.new copasi/layoutUI/CQGLLayoutPainter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + touch -r copasi/layoutUI/CQFontRenderer.cpp copasi/layoutUI/CQFontRenderer.cpp.new + mv copasi/layoutUI/CQFontRenderer.cpp.new copasi/layoutUI/CQFontRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + touch -r copasi/layoutUI/CQCurrentValueTable.cpp copasi/layoutUI/CQCurrentValueTable.cpp.new + mv copasi/layoutUI/CQCurrentValueTable.cpp.new copasi/layoutUI/CQCurrentValueTable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + touch -r copasi/layoutUI/CQAutolayoutWizard.cpp copasi/layoutUI/CQAutolayoutWizard.cpp.new + mv copasi/layoutUI/CQAutolayoutWizard.cpp.new copasi/layoutUI/CQAutolayoutWizard.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + touch -r copasi/layoutUI/CLabel.cpp copasi/layoutUI/CLabel.cpp.new + mv copasi/layoutUI/CLabel.cpp.new copasi/layoutUI/CLabel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + touch -r copasi/layoutUI/CGraphNode.cpp copasi/layoutUI/CGraphNode.cpp.new + mv copasi/layoutUI/CGraphNode.cpp.new copasi/layoutUI/CGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + touch -r copasi/layoutUI/CGraphCurve.cpp copasi/layoutUI/CGraphCurve.cpp.new + mv copasi/layoutUI/CGraphCurve.cpp.new copasi/layoutUI/CGraphCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + touch -r copasi/layoutUI/CDataEntity.cpp copasi/layoutUI/CDataEntity.cpp.new + mv copasi/layoutUI/CDataEntity.cpp.new copasi/layoutUI/CDataEntity.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + touch -r copasi/layoutUI/CCompartmentGraphNode.cpp copasi/layoutUI/CCompartmentGraphNode.cpp.new + mv copasi/layoutUI/CCompartmentGraphNode.cpp.new copasi/layoutUI/CCompartmentGraphNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + touch -r copasi/layoutUI/CArrow.cpp copasi/layoutUI/CArrow.cpp.new + mv copasi/layoutUI/CArrow.cpp.new copasi/layoutUI/CArrow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + touch -r copasi/layoutUI/BezierCurve.cpp copasi/layoutUI/BezierCurve.cpp.new + mv copasi/layoutUI/BezierCurve.cpp.new copasi/layoutUI/BezierCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + touch -r copasi/layout/utility_classes.cpp copasi/layout/utility_classes.cpp.new + mv copasi/layout/utility_classes.cpp.new copasi/layout/utility_classes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + touch -r copasi/layout/SBMLDocumentLoader.cpp copasi/layout/SBMLDocumentLoader.cpp.new + mv copasi/layout/SBMLDocumentLoader.cpp.new copasi/layout/SBMLDocumentLoader.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + touch -r copasi/layout/CListOfLayouts.cpp copasi/layout/CListOfLayouts.cpp.new + mv copasi/layout/CListOfLayouts.cpp.new copasi/layout/CListOfLayouts.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + touch -r copasi/layout/CLayoutState.cpp copasi/layout/CLayoutState.cpp.new + mv copasi/layout/CLayoutState.cpp.new copasi/layout/CLayoutState.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + touch -r copasi/layout/CLayoutInitializer.cpp copasi/layout/CLayoutInitializer.cpp.new + mv copasi/layout/CLayoutInitializer.cpp.new copasi/layout/CLayoutInitializer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + touch -r copasi/layout/CLayoutEngine.cpp copasi/layout/CLayoutEngine.cpp.new + mv copasi/layout/CLayoutEngine.cpp.new copasi/layout/CLayoutEngine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + touch -r copasi/layout/CLayout.cpp copasi/layout/CLayout.cpp.new + mv copasi/layout/CLayout.cpp.new copasi/layout/CLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + touch -r copasi/layout/CLUnresolvedReferenceException.cpp copasi/layout/CLUnresolvedReferenceException.cpp.new + mv copasi/layout/CLUnresolvedReferenceException.cpp.new copasi/layout/CLUnresolvedReferenceException.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + touch -r copasi/layout/CLTransformation2D.cpp copasi/layout/CLTransformation2D.cpp.new + mv copasi/layout/CLTransformation2D.cpp.new copasi/layout/CLTransformation2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + touch -r copasi/layout/CLTransformation.cpp copasi/layout/CLTransformation.cpp.new + mv copasi/layout/CLTransformation.cpp.new copasi/layout/CLTransformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + touch -r copasi/layout/CLText.cpp copasi/layout/CLText.cpp.new + mv copasi/layout/CLText.cpp.new copasi/layout/CLText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + touch -r copasi/layout/CLStyle.cpp copasi/layout/CLStyle.cpp.new + mv copasi/layout/CLStyle.cpp.new copasi/layout/CLStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + touch -r copasi/layout/CLSimpleImageTexturizer.cpp copasi/layout/CLSimpleImageTexturizer.cpp.new + mv copasi/layout/CLSimpleImageTexturizer.cpp.new copasi/layout/CLSimpleImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + touch -r copasi/layout/CLRenderResolver.cpp copasi/layout/CLRenderResolver.cpp.new + mv copasi/layout/CLRenderResolver.cpp.new copasi/layout/CLRenderResolver.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + touch -r copasi/layout/CLRenderPoint.cpp copasi/layout/CLRenderPoint.cpp.new + mv copasi/layout/CLRenderPoint.cpp.new copasi/layout/CLRenderPoint.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + touch -r copasi/layout/CLRenderInformationBase.cpp copasi/layout/CLRenderInformationBase.cpp.new + mv copasi/layout/CLRenderInformationBase.cpp.new copasi/layout/CLRenderInformationBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + touch -r copasi/layout/CLRenderFlattener.cpp copasi/layout/CLRenderFlattener.cpp.new + mv copasi/layout/CLRenderFlattener.cpp.new copasi/layout/CLRenderFlattener.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + touch -r copasi/layout/CLRenderCurve.cpp copasi/layout/CLRenderCurve.cpp.new + mv copasi/layout/CLRenderCurve.cpp.new copasi/layout/CLRenderCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + touch -r copasi/layout/CLRenderCubicBezier.cpp copasi/layout/CLRenderCubicBezier.cpp.new + mv copasi/layout/CLRenderCubicBezier.cpp.new copasi/layout/CLRenderCubicBezier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + touch -r copasi/layout/CLRelAbsVector.cpp copasi/layout/CLRelAbsVector.cpp.new + mv copasi/layout/CLRelAbsVector.cpp.new copasi/layout/CLRelAbsVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + touch -r copasi/layout/CLRectangle.cpp copasi/layout/CLRectangle.cpp.new + mv copasi/layout/CLRectangle.cpp.new copasi/layout/CLRectangle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + touch -r copasi/layout/CLReactionGlyph.cpp copasi/layout/CLReactionGlyph.cpp.new + mv copasi/layout/CLReactionGlyph.cpp.new copasi/layout/CLReactionGlyph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + touch -r copasi/layout/CLRadialGradient.cpp copasi/layout/CLRadialGradient.cpp.new + mv copasi/layout/CLRadialGradient.cpp.new copasi/layout/CLRadialGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + touch -r copasi/layout/CLPolygon.cpp copasi/layout/CLPolygon.cpp.new + mv copasi/layout/CLPolygon.cpp.new copasi/layout/CLPolygon.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + touch -r copasi/layout/CLLocalStyle.cpp copasi/layout/CLLocalStyle.cpp.new + mv copasi/layout/CLLocalStyle.cpp.new copasi/layout/CLLocalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + touch -r copasi/layout/CLLocalRenderInformation.cpp copasi/layout/CLLocalRenderInformation.cpp.new + mv copasi/layout/CLLocalRenderInformation.cpp.new copasi/layout/CLLocalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + touch -r copasi/layout/CLLinearGradient.cpp copasi/layout/CLLinearGradient.cpp.new + mv copasi/layout/CLLinearGradient.cpp.new copasi/layout/CLLinearGradient.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + touch -r copasi/layout/CLLineEnding.cpp copasi/layout/CLLineEnding.cpp.new + mv copasi/layout/CLLineEnding.cpp.new copasi/layout/CLLineEnding.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + touch -r copasi/layout/CLLayoutRenderer.cpp copasi/layout/CLLayoutRenderer.cpp.new + mv copasi/layout/CLLayoutRenderer.cpp.new copasi/layout/CLLayoutRenderer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + touch -r copasi/layout/CLImageTexturizer.cpp copasi/layout/CLImageTexturizer.cpp.new + mv copasi/layout/CLImageTexturizer.cpp.new copasi/layout/CLImageTexturizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + touch -r copasi/layout/CLImage.cpp copasi/layout/CLImage.cpp.new + mv copasi/layout/CLImage.cpp.new copasi/layout/CLImage.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + touch -r copasi/layout/CLGroup.cpp copasi/layout/CLGroup.cpp.new + mv copasi/layout/CLGroup.cpp.new copasi/layout/CLGroup.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + touch -r copasi/layout/CLGraphicalPrimitive2D.cpp copasi/layout/CLGraphicalPrimitive2D.cpp.new + mv copasi/layout/CLGraphicalPrimitive2D.cpp.new copasi/layout/CLGraphicalPrimitive2D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + touch -r copasi/layout/CLGraphicalPrimitive1D.cpp copasi/layout/CLGraphicalPrimitive1D.cpp.new + mv copasi/layout/CLGraphicalPrimitive1D.cpp.new copasi/layout/CLGraphicalPrimitive1D.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + touch -r copasi/layout/CLGraphicalObject.cpp copasi/layout/CLGraphicalObject.cpp.new + mv copasi/layout/CLGraphicalObject.cpp.new copasi/layout/CLGraphicalObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + touch -r copasi/layout/CLGradientStops.cpp copasi/layout/CLGradientStops.cpp.new + mv copasi/layout/CLGradientStops.cpp.new copasi/layout/CLGradientStops.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + touch -r copasi/layout/CLGradientStop.cpp copasi/layout/CLGradientStop.cpp.new + mv copasi/layout/CLGradientStop.cpp.new copasi/layout/CLGradientStop.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + touch -r copasi/layout/CLGradientBase.cpp copasi/layout/CLGradientBase.cpp.new + mv copasi/layout/CLGradientBase.cpp.new copasi/layout/CLGradientBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + touch -r copasi/layout/CLGlyphs.cpp copasi/layout/CLGlyphs.cpp.new + mv copasi/layout/CLGlyphs.cpp.new copasi/layout/CLGlyphs.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + touch -r copasi/layout/CLGlobalStyle.cpp copasi/layout/CLGlobalStyle.cpp.new + mv copasi/layout/CLGlobalStyle.cpp.new copasi/layout/CLGlobalStyle.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + touch -r copasi/layout/CLGlobalRenderInformation.cpp copasi/layout/CLGlobalRenderInformation.cpp.new + mv copasi/layout/CLGlobalRenderInformation.cpp.new copasi/layout/CLGlobalRenderInformation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + touch -r copasi/layout/CLEllipse.cpp copasi/layout/CLEllipse.cpp.new + mv copasi/layout/CLEllipse.cpp.new copasi/layout/CLEllipse.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + touch -r copasi/layout/CLDefaultStyles.cpp copasi/layout/CLDefaultStyles.cpp.new + mv copasi/layout/CLDefaultStyles.cpp.new copasi/layout/CLDefaultStyles.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + touch -r copasi/layout/CLCurve.cpp copasi/layout/CLCurve.cpp.new + mv copasi/layout/CLCurve.cpp.new copasi/layout/CLCurve.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + touch -r copasi/layout/CLColorDefinition.cpp copasi/layout/CLColorDefinition.cpp.new + mv copasi/layout/CLColorDefinition.cpp.new copasi/layout/CLColorDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + touch -r copasi/layout/CLBase.cpp copasi/layout/CLBase.cpp.new + mv copasi/layout/CLBase.cpp.new copasi/layout/CLBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + touch -r copasi/layout/CCopasiSpringLayout.cpp copasi/layout/CCopasiSpringLayout.cpp.new + mv copasi/layout/CCopasiSpringLayout.cpp.new copasi/layout/CCopasiSpringLayout.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + touch -r copasi/layout/CAbstractLayoutInterface.cpp copasi/layout/CAbstractLayoutInterface.cpp.new + mv copasi/layout/CAbstractLayoutInterface.cpp.new copasi/layout/CAbstractLayoutInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + touch -r copasi/function/CNodeK.cpp copasi/function/CNodeK.cpp.new + mv copasi/function/CNodeK.cpp.new copasi/function/CNodeK.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + touch -r copasi/function/CMassAction.cpp copasi/function/CMassAction.cpp.new + mv copasi/function/CMassAction.cpp.new copasi/function/CMassAction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + touch -r copasi/function/CKinFunction.cpp copasi/function/CKinFunction.cpp.new + mv copasi/function/CKinFunction.cpp.new copasi/function/CKinFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + touch -r copasi/function/CFunctionParameters.cpp copasi/function/CFunctionParameters.cpp.new + mv copasi/function/CFunctionParameters.cpp.new copasi/function/CFunctionParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + touch -r copasi/function/CFunctionParameter.cpp copasi/function/CFunctionParameter.cpp.new + mv copasi/function/CFunctionParameter.cpp.new copasi/function/CFunctionParameter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + touch -r copasi/function/CFunctionDB.cpp copasi/function/CFunctionDB.cpp.new + mv copasi/function/CFunctionDB.cpp.new copasi/function/CFunctionDB.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + touch -r copasi/function/CFunctionAnalyzer.cpp copasi/function/CFunctionAnalyzer.cpp.new + mv copasi/function/CFunctionAnalyzer.cpp.new copasi/function/CFunctionAnalyzer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + touch -r copasi/function/CFunction.cpp copasi/function/CFunction.cpp.new + mv copasi/function/CFunction.cpp.new copasi/function/CFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + touch -r copasi/function/CExpression.cpp copasi/function/CExpression.cpp.new + mv copasi/function/CExpression.cpp.new copasi/function/CExpression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + touch -r copasi/function/CEvaluationTree.cpp copasi/function/CEvaluationTree.cpp.new + mv copasi/function/CEvaluationTree.cpp.new copasi/function/CEvaluationTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + touch -r copasi/function/CEvaluationParser_yacc.cpp copasi/function/CEvaluationParser_yacc.cpp.new + mv copasi/function/CEvaluationParser_yacc.cpp.new copasi/function/CEvaluationParser_yacc.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + touch -r copasi/function/CEvaluationNodeWhiteSpace.cpp copasi/function/CEvaluationNodeWhiteSpace.cpp.new + mv copasi/function/CEvaluationNodeWhiteSpace.cpp.new copasi/function/CEvaluationNodeWhiteSpace.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + touch -r copasi/function/CEvaluationNodeVector.cpp copasi/function/CEvaluationNodeVector.cpp.new + mv copasi/function/CEvaluationNodeVector.cpp.new copasi/function/CEvaluationNodeVector.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + touch -r copasi/function/CEvaluationNodeVariable.cpp copasi/function/CEvaluationNodeVariable.cpp.new + mv copasi/function/CEvaluationNodeVariable.cpp.new copasi/function/CEvaluationNodeVariable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + touch -r copasi/function/CEvaluationNodeUnit.cpp copasi/function/CEvaluationNodeUnit.cpp.new + mv copasi/function/CEvaluationNodeUnit.cpp.new copasi/function/CEvaluationNodeUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + touch -r copasi/function/CEvaluationNodeStructure.cpp copasi/function/CEvaluationNodeStructure.cpp.new + mv copasi/function/CEvaluationNodeStructure.cpp.new copasi/function/CEvaluationNodeStructure.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + touch -r copasi/function/CEvaluationNodeOperator.cpp copasi/function/CEvaluationNodeOperator.cpp.new + mv copasi/function/CEvaluationNodeOperator.cpp.new copasi/function/CEvaluationNodeOperator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + touch -r copasi/function/CEvaluationNodeObject.cpp copasi/function/CEvaluationNodeObject.cpp.new + mv copasi/function/CEvaluationNodeObject.cpp.new copasi/function/CEvaluationNodeObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + touch -r copasi/function/CEvaluationNodeNumber.cpp copasi/function/CEvaluationNodeNumber.cpp.new + mv copasi/function/CEvaluationNodeNumber.cpp.new copasi/function/CEvaluationNodeNumber.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + touch -r copasi/function/CEvaluationNodeLogical.cpp copasi/function/CEvaluationNodeLogical.cpp.new + mv copasi/function/CEvaluationNodeLogical.cpp.new copasi/function/CEvaluationNodeLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + touch -r copasi/function/CEvaluationNodeFunction.cpp copasi/function/CEvaluationNodeFunction.cpp.new + mv copasi/function/CEvaluationNodeFunction.cpp.new copasi/function/CEvaluationNodeFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + touch -r copasi/function/CEvaluationNodeDelay.cpp copasi/function/CEvaluationNodeDelay.cpp.new + mv copasi/function/CEvaluationNodeDelay.cpp.new copasi/function/CEvaluationNodeDelay.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + touch -r copasi/function/CEvaluationNodeConstant.cpp copasi/function/CEvaluationNodeConstant.cpp.new + mv copasi/function/CEvaluationNodeConstant.cpp.new copasi/function/CEvaluationNodeConstant.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + touch -r copasi/function/CEvaluationNodeChoice.cpp copasi/function/CEvaluationNodeChoice.cpp.new + mv copasi/function/CEvaluationNodeChoice.cpp.new copasi/function/CEvaluationNodeChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + touch -r copasi/function/CEvaluationNodeCall.cpp copasi/function/CEvaluationNodeCall.cpp.new + mv copasi/function/CEvaluationNodeCall.cpp.new copasi/function/CEvaluationNodeCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + touch -r copasi/function/CEvaluationNode.cpp copasi/function/CEvaluationNode.cpp.new + mv copasi/function/CEvaluationNode.cpp.new copasi/function/CEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + touch -r copasi/function/CEvaluationLexer_lex.cpp copasi/function/CEvaluationLexer_lex.cpp.new + mv copasi/function/CEvaluationLexer_lex.cpp.new copasi/function/CEvaluationLexer_lex.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + touch -r copasi/function/CDerive.cpp copasi/function/CDerive.cpp.new + mv copasi/function/CDerive.cpp.new copasi/function/CDerive.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + touch -r copasi/function/CCallParameters.cpp copasi/function/CCallParameters.cpp.new + mv copasi/function/CCallParameters.cpp.new copasi/function/CCallParameters.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + touch -r copasi/elementaryFluxModes/CZeroSet.cpp copasi/elementaryFluxModes/CZeroSet.cpp.new + mv copasi/elementaryFluxModes/CZeroSet.cpp.new copasi/elementaryFluxModes/CZeroSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + touch -r copasi/elementaryFluxModes/CTableauMatrix.cpp copasi/elementaryFluxModes/CTableauMatrix.cpp.new + mv copasi/elementaryFluxModes/CTableauMatrix.cpp.new copasi/elementaryFluxModes/CTableauMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + touch -r copasi/elementaryFluxModes/CTableauLine.cpp copasi/elementaryFluxModes/CTableauLine.cpp.new + mv copasi/elementaryFluxModes/CTableauLine.cpp.new copasi/elementaryFluxModes/CTableauLine.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + touch -r copasi/elementaryFluxModes/CStepMatrixColumn.cpp copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new + mv copasi/elementaryFluxModes/CStepMatrixColumn.cpp.new copasi/elementaryFluxModes/CStepMatrixColumn.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + touch -r copasi/elementaryFluxModes/CStepMatrix.cpp copasi/elementaryFluxModes/CStepMatrix.cpp.new + mv copasi/elementaryFluxModes/CStepMatrix.cpp.new copasi/elementaryFluxModes/CStepMatrix.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + touch -r copasi/elementaryFluxModes/CSSAMethod.cpp copasi/elementaryFluxModes/CSSAMethod.cpp.new + mv copasi/elementaryFluxModes/CSSAMethod.cpp.new copasi/elementaryFluxModes/CSSAMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + touch -r copasi/elementaryFluxModes/CFluxScore.cpp copasi/elementaryFluxModes/CFluxScore.cpp.new + mv copasi/elementaryFluxModes/CFluxScore.cpp.new copasi/elementaryFluxModes/CFluxScore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + touch -r copasi/elementaryFluxModes/CFluxMode.cpp copasi/elementaryFluxModes/CFluxMode.cpp.new + mv copasi/elementaryFluxModes/CFluxMode.cpp.new copasi/elementaryFluxModes/CFluxMode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + touch -r copasi/elementaryFluxModes/CEFMTask.cpp copasi/elementaryFluxModes/CEFMTask.cpp.new + mv copasi/elementaryFluxModes/CEFMTask.cpp.new copasi/elementaryFluxModes/CEFMTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + touch -r copasi/elementaryFluxModes/CEFMProblem.cpp copasi/elementaryFluxModes/CEFMProblem.cpp.new + mv copasi/elementaryFluxModes/CEFMProblem.cpp.new copasi/elementaryFluxModes/CEFMProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + touch -r copasi/elementaryFluxModes/CEFMMethod.cpp copasi/elementaryFluxModes/CEFMMethod.cpp.new + mv copasi/elementaryFluxModes/CEFMMethod.cpp.new copasi/elementaryFluxModes/CEFMMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + touch -r copasi/elementaryFluxModes/CEFMAlgorithm.cpp copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new + mv copasi/elementaryFluxModes/CEFMAlgorithm.cpp.new copasi/elementaryFluxModes/CEFMAlgorithm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeNode.cpp copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeNode.cpp.new copasi/elementaryFluxModes/CBitPatternTreeNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp.new copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + touch -r copasi/elementaryFluxModes/CBitPatternTree.cpp copasi/elementaryFluxModes/CBitPatternTree.cpp.new + mv copasi/elementaryFluxModes/CBitPatternTree.cpp.new copasi/elementaryFluxModes/CBitPatternTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + touch -r copasi/elementaryFluxModes/CBitPatternMethod.cpp copasi/elementaryFluxModes/CBitPatternMethod.cpp.new + mv copasi/elementaryFluxModes/CBitPatternMethod.cpp.new copasi/elementaryFluxModes/CBitPatternMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + touch -r copasi/crosssection/CCrossSectionTask.cpp copasi/crosssection/CCrossSectionTask.cpp.new + mv copasi/crosssection/CCrossSectionTask.cpp.new copasi/crosssection/CCrossSectionTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + touch -r copasi/crosssection/CCrossSectionProblem.cpp copasi/crosssection/CCrossSectionProblem.cpp.new + mv copasi/crosssection/CCrossSectionProblem.cpp.new copasi/crosssection/CCrossSectionProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + touch -r copasi/crosssection/CCrossSectionMethod.cpp copasi/crosssection/CCrossSectionMethod.cpp.new + mv copasi/crosssection/CCrossSectionMethod.cpp.new copasi/crosssection/CCrossSectionMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + touch -r copasi/core/CRootContainer.cpp copasi/core/CRootContainer.cpp.new + mv copasi/core/CRootContainer.cpp.new copasi/core/CRootContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + touch -r copasi/core/CRegisteredCommonName.cpp copasi/core/CRegisteredCommonName.cpp.new + mv copasi/core/CRegisteredCommonName.cpp.new copasi/core/CRegisteredCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + touch -r copasi/core/CObjectInterface.cpp copasi/core/CObjectInterface.cpp.new + mv copasi/core/CObjectInterface.cpp.new copasi/core/CObjectInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + touch -r copasi/core/CDataTimer.cpp copasi/core/CDataTimer.cpp.new + mv copasi/core/CDataTimer.cpp.new copasi/core/CDataTimer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + touch -r copasi/core/CDataString.cpp copasi/core/CDataString.cpp.new + mv copasi/core/CDataString.cpp.new copasi/core/CDataString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + touch -r copasi/core/CDataObjectMap.cpp copasi/core/CDataObjectMap.cpp.new + mv copasi/core/CDataObjectMap.cpp.new copasi/core/CDataObjectMap.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + touch -r copasi/core/CDataObject.cpp copasi/core/CDataObject.cpp.new + mv copasi/core/CDataObject.cpp.new copasi/core/CDataObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + touch -r copasi/core/CDataContainer.cpp copasi/core/CDataContainer.cpp.new + mv copasi/core/CDataContainer.cpp.new copasi/core/CDataContainer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + touch -r copasi/core/CDataArray.cpp copasi/core/CDataArray.cpp.new + mv copasi/core/CDataArray.cpp.new copasi/core/CDataArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCore.cpp.new copasi/core/CCore.cpp + touch -r copasi/core/CCore.cpp copasi/core/CCore.cpp.new + mv copasi/core/CCore.cpp.new copasi/core/CCore.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + touch -r copasi/core/CCommonName.cpp copasi/core/CCommonName.cpp.new + mv copasi/core/CCommonName.cpp.new copasi/core/CCommonName.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + touch -r copasi/core/CArrayElementReference.cpp copasi/core/CArrayElementReference.cpp.new + mv copasi/core/CArrayElementReference.cpp.new copasi/core/CArrayElementReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/core/CArray.cpp.new copasi/core/CArray.cpp + touch -r copasi/core/CArray.cpp copasi/core/CArray.cpp.new + mv copasi/core/CArray.cpp.new copasi/core/CArray.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + touch -r copasi/compareExpressions/unittests/test_simplify.cpp copasi/compareExpressions/unittests/test_simplify.cpp.new + mv copasi/compareExpressions/unittests/test_simplify.cpp.new copasi/compareExpressions/unittests/test_simplify.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + touch -r copasi/compareExpressions/unittests/test_normalform.cpp copasi/compareExpressions/unittests/test_normalform.cpp.new + mv copasi/compareExpressions/unittests/test_normalform.cpp.new copasi/compareExpressions/unittests/test_normalform.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + touch -r copasi/compareExpressions/unittests/test_node_conversion.cpp copasi/compareExpressions/unittests/test_node_conversion.cpp.new + mv copasi/compareExpressions/unittests/test_node_conversion.cpp.new copasi/compareExpressions/unittests/test_node_conversion.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + touch -r copasi/compareExpressions/unittests/test_expression_comparison.cpp copasi/compareExpressions/unittests/test_expression_comparison.cpp.new + mv copasi/compareExpressions/unittests/test_expression_comparison.cpp.new copasi/compareExpressions/unittests/test_expression_comparison.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + touch -r copasi/compareExpressions/unittests/test_depth_first_iterator.cpp copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new + mv copasi/compareExpressions/unittests/test_depth_first_iterator.cpp.new copasi/compareExpressions/unittests/test_depth_first_iterator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + touch -r copasi/compareExpressions/unittests/test_compare_utilities.cpp copasi/compareExpressions/unittests/test_compare_utilities.cpp.new + mv copasi/compareExpressions/unittests/test_compare_utilities.cpp.new copasi/compareExpressions/unittests/test_compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + touch -r copasi/compareExpressions/unittests/test_cnormallogical.cpp copasi/compareExpressions/unittests/test_cnormallogical.cpp.new + mv copasi/compareExpressions/unittests/test_cnormallogical.cpp.new copasi/compareExpressions/unittests/test_cnormallogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + touch -r copasi/compareExpressions/unittests/test_biomodels217_expression.cpp copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new + mv copasi/compareExpressions/unittests/test_biomodels217_expression.cpp.new copasi/compareExpressions/unittests/test_biomodels217_expression.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + touch -r copasi/compareExpressions/unittests/test.cpp copasi/compareExpressions/unittests/test.cpp.new + mv copasi/compareExpressions/unittests/test.cpp.new copasi/compareExpressions/unittests/test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + touch -r copasi/compareExpressions/stresstest/stress_test.cpp copasi/compareExpressions/stresstest/stress_test.cpp.new + mv copasi/compareExpressions/stresstest/stress_test.cpp.new copasi/compareExpressions/stresstest/stress_test.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + touch -r copasi/compareExpressions/compare_utilities.cpp copasi/compareExpressions/compare_utilities.cpp.new + mv copasi/compareExpressions/compare_utilities.cpp.new copasi/compareExpressions/compare_utilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + touch -r copasi/compareExpressions/ConvertToCEvaluationNode.cpp copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new + mv copasi/compareExpressions/ConvertToCEvaluationNode.cpp.new copasi/compareExpressions/ConvertToCEvaluationNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + touch -r copasi/compareExpressions/CNormalTranslation.cpp copasi/compareExpressions/CNormalTranslation.cpp.new + mv copasi/compareExpressions/CNormalTranslation.cpp.new copasi/compareExpressions/CNormalTranslation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + touch -r copasi/compareExpressions/CNormalSum.cpp copasi/compareExpressions/CNormalSum.cpp.new + mv copasi/compareExpressions/CNormalSum.cpp.new copasi/compareExpressions/CNormalSum.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + touch -r copasi/compareExpressions/CNormalProduct.cpp copasi/compareExpressions/CNormalProduct.cpp.new + mv copasi/compareExpressions/CNormalProduct.cpp.new copasi/compareExpressions/CNormalProduct.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + touch -r copasi/compareExpressions/CNormalLogicalItem.cpp copasi/compareExpressions/CNormalLogicalItem.cpp.new + mv copasi/compareExpressions/CNormalLogicalItem.cpp.new copasi/compareExpressions/CNormalLogicalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + touch -r copasi/compareExpressions/CNormalLogical.cpp copasi/compareExpressions/CNormalLogical.cpp.new + mv copasi/compareExpressions/CNormalLogical.cpp.new copasi/compareExpressions/CNormalLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + touch -r copasi/compareExpressions/CNormalLcm.cpp copasi/compareExpressions/CNormalLcm.cpp.new + mv copasi/compareExpressions/CNormalLcm.cpp.new copasi/compareExpressions/CNormalLcm.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + touch -r copasi/compareExpressions/CNormalItemPower.cpp copasi/compareExpressions/CNormalItemPower.cpp.new + mv copasi/compareExpressions/CNormalItemPower.cpp.new copasi/compareExpressions/CNormalItemPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + touch -r copasi/compareExpressions/CNormalItem.cpp copasi/compareExpressions/CNormalItem.cpp.new + mv copasi/compareExpressions/CNormalItem.cpp.new copasi/compareExpressions/CNormalItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + touch -r copasi/compareExpressions/CNormalGeneralPower.cpp copasi/compareExpressions/CNormalGeneralPower.cpp.new + mv copasi/compareExpressions/CNormalGeneralPower.cpp.new copasi/compareExpressions/CNormalGeneralPower.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + touch -r copasi/compareExpressions/CNormalFunction.cpp copasi/compareExpressions/CNormalFunction.cpp.new + mv copasi/compareExpressions/CNormalFunction.cpp.new copasi/compareExpressions/CNormalFunction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + touch -r copasi/compareExpressions/CNormalFraction.cpp copasi/compareExpressions/CNormalFraction.cpp.new + mv copasi/compareExpressions/CNormalFraction.cpp.new copasi/compareExpressions/CNormalFraction.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + touch -r copasi/compareExpressions/CNormalChoiceLogical.cpp copasi/compareExpressions/CNormalChoiceLogical.cpp.new + mv copasi/compareExpressions/CNormalChoiceLogical.cpp.new copasi/compareExpressions/CNormalChoiceLogical.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + touch -r copasi/compareExpressions/CNormalChoice.cpp copasi/compareExpressions/CNormalChoice.cpp.new + mv copasi/compareExpressions/CNormalChoice.cpp.new copasi/compareExpressions/CNormalChoice.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + touch -r copasi/compareExpressions/CNormalCall.cpp copasi/compareExpressions/CNormalCall.cpp.new + mv copasi/compareExpressions/CNormalCall.cpp.new copasi/compareExpressions/CNormalCall.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + touch -r copasi/compareExpressions/CNormalBase.cpp copasi/compareExpressions/CNormalBase.cpp.new + mv copasi/compareExpressions/CNormalBase.cpp.new copasi/compareExpressions/CNormalBase.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + touch -r copasi/compareExpressions/CEvaluationNodeNormalizer.cpp copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new + mv copasi/compareExpressions/CEvaluationNodeNormalizer.cpp.new copasi/compareExpressions/CEvaluationNodeNormalizer.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + touch -r copasi/commandline/COptions.cpp copasi/commandline/COptions.cpp.new + mv copasi/commandline/COptions.cpp.new copasi/commandline/COptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + touch -r copasi/commandline/COptionParser.cpp copasi/commandline/COptionParser.cpp.new + mv copasi/commandline/COptionParser.cpp.new copasi/commandline/COptionParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + touch -r copasi/commandline/CLocaleString.cpp copasi/commandline/CLocaleString.cpp.new + mv copasi/commandline/CLocaleString.cpp.new copasi/commandline/CLocaleString.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + touch -r copasi/commandline/CConfigurationFile.cpp copasi/commandline/CConfigurationFile.cpp.new + mv copasi/commandline/CConfigurationFile.cpp.new copasi/commandline/CConfigurationFile.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + touch -r copasi/bindings/python/local.cpp copasi/bindings/python/local.cpp.new + mv copasi/bindings/python/local.cpp.new copasi/bindings/python/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + touch -r copasi/bindings/perl/local.cpp copasi/bindings/perl/local.cpp.new + mv copasi/bindings/perl/local.cpp.new copasi/bindings/perl/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + touch -r copasi/bindings/octave/local.cpp copasi/bindings/octave/local.cpp.new + mv copasi/bindings/octave/local.cpp.new copasi/bindings/octave/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + touch -r copasi/bindings/java/local.cpp copasi/bindings/java/local.cpp.new + mv copasi/bindings/java/local.cpp.new copasi/bindings/java/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + touch -r copasi/bindings/csharp/local.cpp copasi/bindings/csharp/local.cpp.new + mv copasi/bindings/csharp/local.cpp.new copasi/bindings/csharp/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + touch -r copasi/bindings/cpp_examples/runSedML/runSedML.cpp copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new + mv copasi/bindings/cpp_examples/runSedML/runSedML.cpp.new copasi/bindings/cpp_examples/runSedML/runSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + touch -r copasi/bindings/cpp_examples/runScan/runScan.cpp copasi/bindings/cpp_examples/runScan/runScan.cpp.new + mv copasi/bindings/cpp_examples/runScan/runScan.cpp.new copasi/bindings/cpp_examples/runScan/runScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + touch -r copasi/bindings/cpp_examples/renderLayout/main.cpp copasi/bindings/cpp_examples/renderLayout/main.cpp.new + mv copasi/bindings/cpp_examples/renderLayout/main.cpp.new copasi/bindings/cpp_examples/renderLayout/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + touch -r copasi/bindings/cpp_examples/renameActiveReport/main.cpp copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new + mv copasi/bindings/cpp_examples/renameActiveReport/main.cpp.new copasi/bindings/cpp_examples/renameActiveReport/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + touch -r copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new + mv copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp.new copasi/bindings/cpp_examples/printFluxModes/printFluxModes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + touch -r copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new + mv copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp.new copasi/bindings/cpp_examples/printAffectedExperiments/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + touch -r copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new + mv copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp.new copasi/bindings/cpp_examples/exportSedML/exportSedML.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + touch -r copasi/bindings/cpp_examples/example9/example9.cpp copasi/bindings/cpp_examples/example9/example9.cpp.new + mv copasi/bindings/cpp_examples/example9/example9.cpp.new copasi/bindings/cpp_examples/example9/example9.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + touch -r copasi/bindings/cpp_examples/example8/example8.cpp copasi/bindings/cpp_examples/example8/example8.cpp.new + mv copasi/bindings/cpp_examples/example8/example8.cpp.new copasi/bindings/cpp_examples/example8/example8.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + touch -r copasi/bindings/cpp_examples/example7/example7.cpp copasi/bindings/cpp_examples/example7/example7.cpp.new + mv copasi/bindings/cpp_examples/example7/example7.cpp.new copasi/bindings/cpp_examples/example7/example7.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + touch -r copasi/bindings/cpp_examples/example6/example6.cpp copasi/bindings/cpp_examples/example6/example6.cpp.new + mv copasi/bindings/cpp_examples/example6/example6.cpp.new copasi/bindings/cpp_examples/example6/example6.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + touch -r copasi/bindings/cpp_examples/example5/example5.cpp copasi/bindings/cpp_examples/example5/example5.cpp.new + mv copasi/bindings/cpp_examples/example5/example5.cpp.new copasi/bindings/cpp_examples/example5/example5.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + touch -r copasi/bindings/cpp_examples/example4/example4.cpp copasi/bindings/cpp_examples/example4/example4.cpp.new + mv copasi/bindings/cpp_examples/example4/example4.cpp.new copasi/bindings/cpp_examples/example4/example4.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + touch -r copasi/bindings/cpp_examples/example3/example3.cpp copasi/bindings/cpp_examples/example3/example3.cpp.new + mv copasi/bindings/cpp_examples/example3/example3.cpp.new copasi/bindings/cpp_examples/example3/example3.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + touch -r copasi/bindings/cpp_examples/example2/example2.cpp copasi/bindings/cpp_examples/example2/example2.cpp.new + mv copasi/bindings/cpp_examples/example2/example2.cpp.new copasi/bindings/cpp_examples/example2/example2.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + touch -r copasi/bindings/cpp_examples/example10/example10.cpp copasi/bindings/cpp_examples/example10/example10.cpp.new + mv copasi/bindings/cpp_examples/example10/example10.cpp.new copasi/bindings/cpp_examples/example10/example10.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + touch -r copasi/bindings/cpp_examples/example1/example1.cpp copasi/bindings/cpp_examples/example1/example1.cpp.new + mv copasi/bindings/cpp_examples/example1/example1.cpp.new copasi/bindings/cpp_examples/example1/example1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + touch -r copasi/bindings/cpp_examples/changeValues/changeValues.cpp copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new + mv copasi/bindings/cpp_examples/changeValues/changeValues.cpp.new copasi/bindings/cpp_examples/changeValues/changeValues.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + touch -r copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new + mv copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp.new copasi/bindings/cpp_examples/calculateSolutionStatistic/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + touch -r copasi/bindings/cpp_examples/assignParameterSet/main.cpp copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new + mv copasi/bindings/cpp_examples/assignParameterSet/main.cpp.new copasi/bindings/cpp_examples/assignParameterSet/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + touch -r copasi/bindings/common/local_common.cpp copasi/bindings/common/local_common.cpp.new + mv copasi/bindings/common/local_common.cpp.new copasi/bindings/common/local_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + touch -r copasi/bindings/common/downcast_common.cpp copasi/bindings/common/downcast_common.cpp.new + mv copasi/bindings/common/downcast_common.cpp.new copasi/bindings/common/downcast_common.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + touch -r copasi/bindings/R/local.cpp copasi/bindings/R/local.cpp.new + mv copasi/bindings/R/local.cpp.new copasi/bindings/R/local.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + touch -r copasi/bindings/R/RProcessCallback.cpp copasi/bindings/R/RProcessCallback.cpp.new + mv copasi/bindings/R/RProcessCallback.cpp.new copasi/bindings/R/RProcessCallback.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + touch -r copasi/barChart/qwt3dScale.cpp copasi/barChart/qwt3dScale.cpp.new + mv copasi/barChart/qwt3dScale.cpp.new copasi/barChart/qwt3dScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + touch -r copasi/barChart/qwt3dPlot.cpp copasi/barChart/qwt3dPlot.cpp.new + mv copasi/barChart/qwt3dPlot.cpp.new copasi/barChart/qwt3dPlot.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + touch -r copasi/barChart/qwt3dColor.cpp copasi/barChart/qwt3dColor.cpp.new + mv copasi/barChart/qwt3dColor.cpp.new copasi/barChart/qwt3dColor.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + touch -r copasi/barChart/qwt3dBars.cpp copasi/barChart/qwt3dBars.cpp.new + mv copasi/barChart/qwt3dBars.cpp.new copasi/barChart/qwt3dBars.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + touch -r copasi/barChart/CQBaseWidget.cpp copasi/barChart/CQBaseWidget.cpp.new + mv copasi/barChart/CQBaseWidget.cpp.new copasi/barChart/CQBaseWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + touch -r copasi/barChart/CQ3DBarsModifier.cpp copasi/barChart/CQ3DBarsModifier.cpp.new + mv copasi/barChart/CQ3DBarsModifier.cpp.new copasi/barChart/CQ3DBarsModifier.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + touch -r copasi/analytics/CStatistics.cpp copasi/analytics/CStatistics.cpp.new + mv copasi/analytics/CStatistics.cpp.new copasi/analytics/CStatistics.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + touch -r copasi/analytics/CAnalyticsTask.cpp copasi/analytics/CAnalyticsTask.cpp.new + mv copasi/analytics/CAnalyticsTask.cpp.new copasi/analytics/CAnalyticsTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + touch -r copasi/analytics/CAnalyticsProblem.cpp copasi/analytics/CAnalyticsProblem.cpp.new + mv copasi/analytics/CAnalyticsProblem.cpp.new copasi/analytics/CAnalyticsProblem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + touch -r copasi/analytics/CAnalyticsMethod.cpp copasi/analytics/CAnalyticsMethod.cpp.new + mv copasi/analytics/CAnalyticsMethod.cpp.new copasi/analytics/CAnalyticsMethod.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + touch -r copasi/ViewCurrentUI/worker.cpp copasi/ViewCurrentUI/worker.cpp.new + mv copasi/ViewCurrentUI/worker.cpp.new copasi/ViewCurrentUI/worker.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + touch -r copasi/ViewCurrentUI/main.cpp copasi/ViewCurrentUI/main.cpp.new + mv copasi/ViewCurrentUI/main.cpp.new copasi/ViewCurrentUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + touch -r copasi/ViewCurrentUI/arguments.cpp copasi/ViewCurrentUI/arguments.cpp.new + mv copasi/ViewCurrentUI/arguments.cpp.new copasi/ViewCurrentUI/arguments.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + touch -r copasi/UI/qtUtilities.cpp copasi/UI/qtUtilities.cpp.new + mv copasi/UI/qtUtilities.cpp.new copasi/UI/qtUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + touch -r copasi/UI/parametertable.cpp copasi/UI/parametertable.cpp.new + mv copasi/UI/parametertable.cpp.new copasi/UI/parametertable.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + touch -r copasi/UI/objectdebug.cpp copasi/UI/objectdebug.cpp.new + mv copasi/UI/objectdebug.cpp.new copasi/UI/objectdebug.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + touch -r copasi/UI/listviews.cpp copasi/UI/listviews.cpp.new + mv copasi/UI/listviews.cpp.new copasi/UI/listviews.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + touch -r copasi/UI/copasiui3window.cpp copasi/UI/copasiui3window.cpp.new + mv copasi/UI/copasiui3window.cpp.new copasi/UI/copasiui3window.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + touch -r copasi/UI/copasiWidget.cpp copasi/UI/copasiWidget.cpp.new + mv copasi/UI/copasiWidget.cpp.new copasi/UI/copasiWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + touch -r copasi/UI/TaskWidget.cpp copasi/UI/TaskWidget.cpp.new + mv copasi/UI/TaskWidget.cpp.new copasi/UI/TaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + touch -r copasi/UI/SteadyStateWidget.cpp copasi/UI/SteadyStateWidget.cpp.new + mv copasi/UI/SteadyStateWidget.cpp.new copasi/UI/SteadyStateWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + touch -r copasi/UI/StateSubwidget.cpp copasi/UI/StateSubwidget.cpp.new + mv copasi/UI/StateSubwidget.cpp.new copasi/UI/StateSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + touch -r copasi/UI/SliderSettingsDialog.cpp copasi/UI/SliderSettingsDialog.cpp.new + mv copasi/UI/SliderSettingsDialog.cpp.new copasi/UI/SliderSettingsDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + touch -r copasi/UI/SliderDialog.cpp copasi/UI/SliderDialog.cpp.new + mv copasi/UI/SliderDialog.cpp.new copasi/UI/SliderDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + touch -r copasi/UI/SensitivitiesWidget.cpp copasi/UI/SensitivitiesWidget.cpp.new + mv copasi/UI/SensitivitiesWidget.cpp.new copasi/UI/SensitivitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + touch -r copasi/UI/SensWidgetComboBox.cpp copasi/UI/SensWidgetComboBox.cpp.new + mv copasi/UI/SensWidgetComboBox.cpp.new copasi/UI/SensWidgetComboBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + touch -r copasi/UI/ScanWidget.cpp copasi/UI/ScanWidget.cpp.new + mv copasi/UI/ScanWidget.cpp.new copasi/UI/ScanWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + touch -r copasi/UI/ReactionsWidget1.cpp copasi/UI/ReactionsWidget1.cpp.new + mv copasi/UI/ReactionsWidget1.cpp.new copasi/UI/ReactionsWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + touch -r copasi/UI/ObjectBrowserWidget.cpp copasi/UI/ObjectBrowserWidget.cpp.new + mv copasi/UI/ObjectBrowserWidget.cpp.new copasi/UI/ObjectBrowserWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + touch -r copasi/UI/ObjectBrowserItem.cpp copasi/UI/ObjectBrowserItem.cpp.new + mv copasi/UI/ObjectBrowserItem.cpp.new copasi/UI/ObjectBrowserItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + touch -r copasi/UI/ObjectBrowserDialog.cpp copasi/UI/ObjectBrowserDialog.cpp.new + mv copasi/UI/ObjectBrowserDialog.cpp.new copasi/UI/ObjectBrowserDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + touch -r copasi/UI/MyLineEdit.cpp copasi/UI/MyLineEdit.cpp.new + mv copasi/UI/MyLineEdit.cpp.new copasi/UI/MyLineEdit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + touch -r copasi/UI/FunctionWidget1.cpp copasi/UI/FunctionWidget1.cpp.new + mv copasi/UI/FunctionWidget1.cpp.new copasi/UI/FunctionWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + touch -r copasi/UI/DefaultplotDialog.cpp copasi/UI/DefaultplotDialog.cpp.new + mv copasi/UI/DefaultplotDialog.cpp.new copasi/UI/DefaultplotDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + touch -r copasi/UI/DataModelGUI.cpp copasi/UI/DataModelGUI.cpp.new + mv copasi/UI/DataModelGUI.cpp.new copasi/UI/DataModelGUI.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + touch -r copasi/UI/CopasiSlider.cpp copasi/UI/CopasiSlider.cpp.new + mv copasi/UI/CopasiSlider.cpp.new copasi/UI/CopasiSlider.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + touch -r copasi/UI/CopasiFileDialog.cpp copasi/UI/CopasiFileDialog.cpp.new + mv copasi/UI/CopasiFileDialog.cpp.new copasi/UI/CopasiFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + touch -r copasi/UI/CWindowInterface.cpp copasi/UI/CWindowInterface.cpp.new + mv copasi/UI/CWindowInterface.cpp.new copasi/UI/CWindowInterface.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + touch -r copasi/UI/CUpDownSubwidget.cpp copasi/UI/CUpDownSubwidget.cpp.new + mv copasi/UI/CUpDownSubwidget.cpp.new copasi/UI/CUpDownSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + touch -r copasi/UI/CScanWidgetTask.cpp copasi/UI/CScanWidgetTask.cpp.new + mv copasi/UI/CScanWidgetTask.cpp.new copasi/UI/CScanWidgetTask.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + touch -r copasi/UI/CScanWidgetScan.cpp copasi/UI/CScanWidgetScan.cpp.new + mv copasi/UI/CScanWidgetScan.cpp.new copasi/UI/CScanWidgetScan.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + touch -r copasi/UI/CScanWidgetRepeat.cpp copasi/UI/CScanWidgetRepeat.cpp.new + mv copasi/UI/CScanWidgetRepeat.cpp.new copasi/UI/CScanWidgetRepeat.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + touch -r copasi/UI/CScanWidgetRandom.cpp copasi/UI/CScanWidgetRandom.cpp.new + mv copasi/UI/CScanWidgetRandom.cpp.new copasi/UI/CScanWidgetRandom.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + touch -r copasi/UI/CScanItemData.cpp copasi/UI/CScanItemData.cpp.new + mv copasi/UI/CScanItemData.cpp.new copasi/UI/CScanItemData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + touch -r copasi/UI/CScanContainerWidget.cpp copasi/UI/CScanContainerWidget.cpp.new + mv copasi/UI/CScanContainerWidget.cpp.new copasi/UI/CScanContainerWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + touch -r copasi/UI/CQValidatorUnit.cpp copasi/UI/CQValidatorUnit.cpp.new + mv copasi/UI/CQValidatorUnit.cpp.new copasi/UI/CQValidatorUnit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + touch -r copasi/UI/CQValidator.cpp copasi/UI/CQValidator.cpp.new + mv copasi/UI/CQValidator.cpp.new copasi/UI/CQValidator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + touch -r copasi/UI/CQUpdatesWidget.cpp copasi/UI/CQUpdatesWidget.cpp.new + mv copasi/UI/CQUpdatesWidget.cpp.new copasi/UI/CQUpdatesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + touch -r copasi/UI/CQUpdateAvogadro.cpp copasi/UI/CQUpdateAvogadro.cpp.new + mv copasi/UI/CQUpdateAvogadro.cpp.new copasi/UI/CQUpdateAvogadro.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + touch -r copasi/UI/CQUnitsWidget.cpp copasi/UI/CQUnitsWidget.cpp.new + mv copasi/UI/CQUnitsWidget.cpp.new copasi/UI/CQUnitsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + touch -r copasi/UI/CQUnitDetail.cpp copasi/UI/CQUnitDetail.cpp.new + mv copasi/UI/CQUnitDetail.cpp.new copasi/UI/CQUnitDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + touch -r copasi/UI/CQUnitDM.cpp copasi/UI/CQUnitDM.cpp.new + mv copasi/UI/CQUnitDM.cpp.new copasi/UI/CQUnitDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + touch -r copasi/UI/CQUndoTester.cpp copasi/UI/CQUndoTester.cpp.new + mv copasi/UI/CQUndoTester.cpp.new copasi/UI/CQUndoTester.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + touch -r copasi/UI/CQTrajectoryWidget.cpp copasi/UI/CQTrajectoryWidget.cpp.new + mv copasi/UI/CQTrajectoryWidget.cpp.new copasi/UI/CQTrajectoryWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + touch -r copasi/UI/CQTimeSeriesWidget.cpp copasi/UI/CQTimeSeriesWidget.cpp.new + mv copasi/UI/CQTimeSeriesWidget.cpp.new copasi/UI/CQTimeSeriesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + touch -r copasi/UI/CQTimeSeriesDM.cpp copasi/UI/CQTimeSeriesDM.cpp.new + mv copasi/UI/CQTimeSeriesDM.cpp.new copasi/UI/CQTimeSeriesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + touch -r copasi/UI/CQTimeSensWidget.cpp copasi/UI/CQTimeSensWidget.cpp.new + mv copasi/UI/CQTimeSensWidget.cpp.new copasi/UI/CQTimeSensWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + touch -r copasi/UI/CQThread.cpp copasi/UI/CQThread.cpp.new + mv copasi/UI/CQThread.cpp.new copasi/UI/CQThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + touch -r copasi/UI/CQTextDialog.cpp copasi/UI/CQTextDialog.cpp.new + mv copasi/UI/CQTextDialog.cpp.new copasi/UI/CQTextDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + touch -r copasi/UI/CQTaskThread.cpp copasi/UI/CQTaskThread.cpp.new + mv copasi/UI/CQTaskThread.cpp.new copasi/UI/CQTaskThread.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + touch -r copasi/UI/CQTaskMethodWidget.cpp copasi/UI/CQTaskMethodWidget.cpp.new + mv copasi/UI/CQTaskMethodWidget.cpp.new copasi/UI/CQTaskMethodWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + touch -r copasi/UI/CQTaskHeaderWidget.cpp copasi/UI/CQTaskHeaderWidget.cpp.new + mv copasi/UI/CQTaskHeaderWidget.cpp.new copasi/UI/CQTaskHeaderWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + touch -r copasi/UI/CQTaskBtnWidget.cpp copasi/UI/CQTaskBtnWidget.cpp.new + mv copasi/UI/CQTaskBtnWidget.cpp.new copasi/UI/CQTaskBtnWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + touch -r copasi/UI/CQTableWidget.cpp copasi/UI/CQTableWidget.cpp.new + mv copasi/UI/CQTableWidget.cpp.new copasi/UI/CQTableWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + touch -r copasi/UI/CQTableView.cpp copasi/UI/CQTableView.cpp.new + mv copasi/UI/CQTableView.cpp.new copasi/UI/CQTableView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + touch -r copasi/UI/CQTabWidget.cpp copasi/UI/CQTabWidget.cpp.new + mv copasi/UI/CQTabWidget.cpp.new copasi/UI/CQTabWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + touch -r copasi/UI/CQTSSAWidget.cpp copasi/UI/CQTSSAWidget.cpp.new + mv copasi/UI/CQTSSAWidget.cpp.new copasi/UI/CQTSSAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + touch -r copasi/UI/CQTSSATimeScaleWidget.cpp copasi/UI/CQTSSATimeScaleWidget.cpp.new + mv copasi/UI/CQTSSATimeScaleWidget.cpp.new copasi/UI/CQTSSATimeScaleWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + touch -r copasi/UI/CQTSSAResultWidget.cpp copasi/UI/CQTSSAResultWidget.cpp.new + mv copasi/UI/CQTSSAResultWidget.cpp.new copasi/UI/CQTSSAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + touch -r copasi/UI/CQTSSAResultSubWidget.cpp copasi/UI/CQTSSAResultSubWidget.cpp.new + mv copasi/UI/CQTSSAResultSubWidget.cpp.new copasi/UI/CQTSSAResultSubWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + touch -r copasi/UI/CQSteadyStateResult.cpp copasi/UI/CQSteadyStateResult.cpp.new + mv copasi/UI/CQSteadyStateResult.cpp.new copasi/UI/CQSteadyStateResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + touch -r copasi/UI/CQStartValueReset.cpp copasi/UI/CQStartValueReset.cpp.new + mv copasi/UI/CQStartValueReset.cpp.new copasi/UI/CQStartValueReset.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + touch -r copasi/UI/CQSplashWidget.cpp copasi/UI/CQSplashWidget.cpp.new + mv copasi/UI/CQSplashWidget.cpp.new copasi/UI/CQSplashWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + touch -r copasi/UI/CQSpinBoxDelegate.cpp copasi/UI/CQSpinBoxDelegate.cpp.new + mv copasi/UI/CQSpinBoxDelegate.cpp.new copasi/UI/CQSpinBoxDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + touch -r copasi/UI/CQSpeciesWidget.cpp copasi/UI/CQSpeciesWidget.cpp.new + mv copasi/UI/CQSpeciesWidget.cpp.new copasi/UI/CQSpeciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + touch -r copasi/UI/CQSpeciesDetail.cpp copasi/UI/CQSpeciesDetail.cpp.new + mv copasi/UI/CQSpeciesDetail.cpp.new copasi/UI/CQSpeciesDetail.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + touch -r copasi/UI/CQSpecieDM.cpp copasi/UI/CQSpecieDM.cpp.new + mv copasi/UI/CQSpecieDM.cpp.new copasi/UI/CQSpecieDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + touch -r copasi/UI/CQSortFilterProxyModel.cpp copasi/UI/CQSortFilterProxyModel.cpp.new + mv copasi/UI/CQSortFilterProxyModel.cpp.new copasi/UI/CQSortFilterProxyModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + touch -r copasi/UI/CQSimpleSelectionTree.cpp copasi/UI/CQSimpleSelectionTree.cpp.new + mv copasi/UI/CQSimpleSelectionTree.cpp.new copasi/UI/CQSimpleSelectionTree.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + touch -r copasi/UI/CQSensResultWidget.cpp copasi/UI/CQSensResultWidget.cpp.new + mv copasi/UI/CQSensResultWidget.cpp.new copasi/UI/CQSensResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + touch -r copasi/UI/CQScrolledDependenciesWidget.cpp copasi/UI/CQScrolledDependenciesWidget.cpp.new + mv copasi/UI/CQScrolledDependenciesWidget.cpp.new copasi/UI/CQScrolledDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + touch -r copasi/UI/CQScanWidgetParameterSet.cpp copasi/UI/CQScanWidgetParameterSet.cpp.new + mv copasi/UI/CQScanWidgetParameterSet.cpp.new copasi/UI/CQScanWidgetParameterSet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + touch -r copasi/UI/CQSEDMLImportDialog.cpp copasi/UI/CQSEDMLImportDialog.cpp.new + mv copasi/UI/CQSEDMLImportDialog.cpp.new copasi/UI/CQSEDMLImportDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + touch -r copasi/UI/CQSEDMLFileDialog.cpp copasi/UI/CQSEDMLFileDialog.cpp.new + mv copasi/UI/CQSEDMLFileDialog.cpp.new copasi/UI/CQSEDMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + touch -r copasi/UI/CQSBMLFileDialog.cpp copasi/UI/CQSBMLFileDialog.cpp.new + mv copasi/UI/CQSBMLFileDialog.cpp.new copasi/UI/CQSBMLFileDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + touch -r copasi/UI/CQReportsWidget.cpp copasi/UI/CQReportsWidget.cpp.new + mv copasi/UI/CQReportsWidget.cpp.new copasi/UI/CQReportsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + touch -r copasi/UI/CQReportListItem.cpp copasi/UI/CQReportListItem.cpp.new + mv copasi/UI/CQReportListItem.cpp.new copasi/UI/CQReportListItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + touch -r copasi/UI/CQReportDefinitionSelect.cpp copasi/UI/CQReportDefinitionSelect.cpp.new + mv copasi/UI/CQReportDefinitionSelect.cpp.new copasi/UI/CQReportDefinitionSelect.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + touch -r copasi/UI/CQReportDefinition.cpp copasi/UI/CQReportDefinition.cpp.new + mv copasi/UI/CQReportDefinition.cpp.new copasi/UI/CQReportDefinition.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + touch -r copasi/UI/CQReportDM.cpp copasi/UI/CQReportDM.cpp.new + mv copasi/UI/CQReportDM.cpp.new copasi/UI/CQReportDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + touch -r copasi/UI/CQReactionsWidget.cpp copasi/UI/CQReactionsWidget.cpp.new + mv copasi/UI/CQReactionsWidget.cpp.new copasi/UI/CQReactionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + touch -r copasi/UI/CQReactionDM.cpp copasi/UI/CQReactionDM.cpp.new + mv copasi/UI/CQReactionDM.cpp.new copasi/UI/CQReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + touch -r copasi/UI/CQPushButtonDelegate.cpp copasi/UI/CQPushButtonDelegate.cpp.new + mv copasi/UI/CQPushButtonDelegate.cpp.new copasi/UI/CQPushButtonDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + touch -r copasi/UI/CQProgressItemText.cpp copasi/UI/CQProgressItemText.cpp.new + mv copasi/UI/CQProgressItemText.cpp.new copasi/UI/CQProgressItemText.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + touch -r copasi/UI/CQProgressItemBar.cpp copasi/UI/CQProgressItemBar.cpp.new + mv copasi/UI/CQProgressItemBar.cpp.new copasi/UI/CQProgressItemBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + touch -r copasi/UI/CQProgressItem.cpp copasi/UI/CQProgressItem.cpp.new + mv copasi/UI/CQProgressItem.cpp.new copasi/UI/CQProgressItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + touch -r copasi/UI/CQProgressDialog.cpp copasi/UI/CQProgressDialog.cpp.new + mv copasi/UI/CQProgressDialog.cpp.new copasi/UI/CQProgressDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + touch -r copasi/UI/CQPreferenceDialog.cpp copasi/UI/CQPreferenceDialog.cpp.new + mv copasi/UI/CQPreferenceDialog.cpp.new copasi/UI/CQPreferenceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + touch -r copasi/UI/CQPlotsWidget.cpp copasi/UI/CQPlotsWidget.cpp.new + mv copasi/UI/CQPlotsWidget.cpp.new copasi/UI/CQPlotsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + touch -r copasi/UI/CQPlotDM.cpp copasi/UI/CQPlotDM.cpp.new + mv copasi/UI/CQPlotDM.cpp.new copasi/UI/CQPlotDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + touch -r copasi/UI/CQParameterSetsWidget.cpp copasi/UI/CQParameterSetsWidget.cpp.new + mv copasi/UI/CQParameterSetsWidget.cpp.new copasi/UI/CQParameterSetsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + touch -r copasi/UI/CQParameterSetsDM.cpp copasi/UI/CQParameterSetsDM.cpp.new + mv copasi/UI/CQParameterSetsDM.cpp.new copasi/UI/CQParameterSetsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + touch -r copasi/UI/CQParameterResultItemModel.cpp copasi/UI/CQParameterResultItemModel.cpp.new + mv copasi/UI/CQParameterResultItemModel.cpp.new copasi/UI/CQParameterResultItemModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + touch -r copasi/UI/CQParameterOverviewWidget.cpp copasi/UI/CQParameterOverviewWidget.cpp.new + mv copasi/UI/CQParameterOverviewWidget.cpp.new copasi/UI/CQParameterOverviewWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + touch -r copasi/UI/CQParameterOverviewDM.cpp copasi/UI/CQParameterOverviewDM.cpp.new + mv copasi/UI/CQParameterOverviewDM.cpp.new copasi/UI/CQParameterOverviewDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + touch -r copasi/UI/CQParameterGroupView.cpp copasi/UI/CQParameterGroupView.cpp.new + mv copasi/UI/CQParameterGroupView.cpp.new copasi/UI/CQParameterGroupView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + touch -r copasi/UI/CQParameterGroupDM.cpp copasi/UI/CQParameterGroupDM.cpp.new + mv copasi/UI/CQParameterGroupDM.cpp.new copasi/UI/CQParameterGroupDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + touch -r copasi/UI/CQParameterEstimationResult.cpp copasi/UI/CQParameterEstimationResult.cpp.new + mv copasi/UI/CQParameterEstimationResult.cpp.new copasi/UI/CQParameterEstimationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + touch -r copasi/UI/CQOscillationTaskWidget.cpp copasi/UI/CQOscillationTaskWidget.cpp.new + mv copasi/UI/CQOscillationTaskWidget.cpp.new copasi/UI/CQOscillationTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + touch -r copasi/UI/CQOptimizationWidget.cpp copasi/UI/CQOptimizationWidget.cpp.new + mv copasi/UI/CQOptimizationWidget.cpp.new copasi/UI/CQOptimizationWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + touch -r copasi/UI/CQOptimizationResult.cpp copasi/UI/CQOptimizationResult.cpp.new + mv copasi/UI/CQOptimizationResult.cpp.new copasi/UI/CQOptimizationResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + touch -r copasi/UI/CQOptPopulation.cpp copasi/UI/CQOptPopulation.cpp.new + mv copasi/UI/CQOptPopulation.cpp.new copasi/UI/CQOptPopulation.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + touch -r copasi/UI/CQNotes.cpp copasi/UI/CQNotes.cpp.new + mv copasi/UI/CQNotes.cpp.new copasi/UI/CQNotes.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + touch -r copasi/UI/CQNameSelectionDialog.cpp copasi/UI/CQNameSelectionDialog.cpp.new + mv copasi/UI/CQNameSelectionDialog.cpp.new copasi/UI/CQNameSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + touch -r copasi/UI/CQMultipleSelectionDialog.cpp copasi/UI/CQMultipleSelectionDialog.cpp.new + mv copasi/UI/CQMultipleSelectionDialog.cpp.new copasi/UI/CQMultipleSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + touch -r copasi/UI/CQMoietiesTaskWidget.cpp copasi/UI/CQMoietiesTaskWidget.cpp.new + mv copasi/UI/CQMoietiesTaskWidget.cpp.new copasi/UI/CQMoietiesTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + touch -r copasi/UI/CQMoietiesTaskResult.cpp copasi/UI/CQMoietiesTaskResult.cpp.new + mv copasi/UI/CQMoietiesTaskResult.cpp.new copasi/UI/CQMoietiesTaskResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + touch -r copasi/UI/CQModelWidget.cpp copasi/UI/CQModelWidget.cpp.new + mv copasi/UI/CQModelWidget.cpp.new copasi/UI/CQModelWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + touch -r copasi/UI/CQModelValue.cpp copasi/UI/CQModelValue.cpp.new + mv copasi/UI/CQModelValue.cpp.new copasi/UI/CQModelValue.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + touch -r copasi/UI/CQMmlScrollView.cpp copasi/UI/CQMmlScrollView.cpp.new + mv copasi/UI/CQMmlScrollView.cpp.new copasi/UI/CQMmlScrollView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + touch -r copasi/UI/CQMessageBox.cpp copasi/UI/CQMessageBox.cpp.new + mv copasi/UI/CQMessageBox.cpp.new copasi/UI/CQMessageBox.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + touch -r copasi/UI/CQMergingData.cpp copasi/UI/CQMergingData.cpp.new + mv copasi/UI/CQMergingData.cpp.new copasi/UI/CQMergingData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + touch -r copasi/UI/CQMatrixDialog.cpp copasi/UI/CQMatrixDialog.cpp.new + mv copasi/UI/CQMatrixDialog.cpp.new copasi/UI/CQMatrixDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + touch -r copasi/UI/CQMathMatrixWidget.cpp copasi/UI/CQMathMatrixWidget.cpp.new + mv copasi/UI/CQMathMatrixWidget.cpp.new copasi/UI/CQMathMatrixWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + touch -r copasi/UI/CQMCAWidget.cpp copasi/UI/CQMCAWidget.cpp.new + mv copasi/UI/CQMCAWidget.cpp.new copasi/UI/CQMCAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + touch -r copasi/UI/CQLyapWidget.cpp copasi/UI/CQLyapWidget.cpp.new + mv copasi/UI/CQLyapWidget.cpp.new copasi/UI/CQLyapWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + touch -r copasi/UI/CQLyapResultWidget.cpp copasi/UI/CQLyapResultWidget.cpp.new + mv copasi/UI/CQLyapResultWidget.cpp.new copasi/UI/CQLyapResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + touch -r copasi/UI/CQLayoutsWidget.cpp copasi/UI/CQLayoutsWidget.cpp.new + mv copasi/UI/CQLayoutsWidget.cpp.new copasi/UI/CQLayoutsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + touch -r copasi/UI/CQLayoutsDM.cpp copasi/UI/CQLayoutsDM.cpp.new + mv copasi/UI/CQLayoutsDM.cpp.new copasi/UI/CQLayoutsDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + touch -r copasi/UI/CQLNAWidget.cpp copasi/UI/CQLNAWidget.cpp.new + mv copasi/UI/CQLNAWidget.cpp.new copasi/UI/CQLNAWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + touch -r copasi/UI/CQGlobalQuantityDM.cpp copasi/UI/CQGlobalQuantityDM.cpp.new + mv copasi/UI/CQGlobalQuantityDM.cpp.new copasi/UI/CQGlobalQuantityDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + touch -r copasi/UI/CQGlobalQuantitiesWidget.cpp copasi/UI/CQGlobalQuantitiesWidget.cpp.new + mv copasi/UI/CQGlobalQuantitiesWidget.cpp.new copasi/UI/CQGlobalQuantitiesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + touch -r copasi/UI/CQFunctionsWidget.cpp copasi/UI/CQFunctionsWidget.cpp.new + mv copasi/UI/CQFunctionsWidget.cpp.new copasi/UI/CQFunctionsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + touch -r copasi/UI/CQFunctionDM.cpp copasi/UI/CQFunctionDM.cpp.new + mv copasi/UI/CQFunctionDM.cpp.new copasi/UI/CQFunctionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + touch -r copasi/UI/CQFluxModeDM.cpp copasi/UI/CQFluxModeDM.cpp.new + mv copasi/UI/CQFluxModeDM.cpp.new copasi/UI/CQFluxModeDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + touch -r copasi/UI/CQFittingWidget.cpp copasi/UI/CQFittingWidget.cpp.new + mv copasi/UI/CQFittingWidget.cpp.new copasi/UI/CQFittingWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + touch -r copasi/UI/CQFittingResultTab1.cpp copasi/UI/CQFittingResultTab1.cpp.new + mv copasi/UI/CQFittingResultTab1.cpp.new copasi/UI/CQFittingResultTab1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + touch -r copasi/UI/CQFittingResult.cpp copasi/UI/CQFittingResult.cpp.new + mv copasi/UI/CQFittingResult.cpp.new copasi/UI/CQFittingResult.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + touch -r copasi/UI/CQFittingItemWidget.cpp copasi/UI/CQFittingItemWidget.cpp.new + mv copasi/UI/CQFittingItemWidget.cpp.new copasi/UI/CQFittingItemWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + touch -r copasi/UI/CQExpressionWidget.cpp copasi/UI/CQExpressionWidget.cpp.new + mv copasi/UI/CQExpressionWidget.cpp.new copasi/UI/CQExpressionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + touch -r copasi/UI/CQExpressionMmlStackedWidget.cpp copasi/UI/CQExpressionMmlStackedWidget.cpp.new + mv copasi/UI/CQExpressionMmlStackedWidget.cpp.new copasi/UI/CQExpressionMmlStackedWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + touch -r copasi/UI/CQExperimentSelection.cpp copasi/UI/CQExperimentSelection.cpp.new + mv copasi/UI/CQExperimentSelection.cpp.new copasi/UI/CQExperimentSelection.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + touch -r copasi/UI/CQExperimentData.cpp copasi/UI/CQExperimentData.cpp.new + mv copasi/UI/CQExperimentData.cpp.new copasi/UI/CQExperimentData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + touch -r copasi/UI/CQExpandModelData.cpp copasi/UI/CQExpandModelData.cpp.new + mv copasi/UI/CQExpandModelData.cpp.new copasi/UI/CQExpandModelData.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + touch -r copasi/UI/CQEventsWidget.cpp copasi/UI/CQEventsWidget.cpp.new + mv copasi/UI/CQEventsWidget.cpp.new copasi/UI/CQEventsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + touch -r copasi/UI/CQEventWidget1.cpp copasi/UI/CQEventWidget1.cpp.new + mv copasi/UI/CQEventWidget1.cpp.new copasi/UI/CQEventWidget1.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + touch -r copasi/UI/CQEventDM.cpp copasi/UI/CQEventDM.cpp.new + mv copasi/UI/CQEventDM.cpp.new copasi/UI/CQEventDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + touch -r copasi/UI/CQEFMWidget.cpp copasi/UI/CQEFMWidget.cpp.new + mv copasi/UI/CQEFMWidget.cpp.new copasi/UI/CQEFMWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + touch -r copasi/UI/CQEFMSpeciesDM.cpp copasi/UI/CQEFMSpeciesDM.cpp.new + mv copasi/UI/CQEFMSpeciesDM.cpp.new copasi/UI/CQEFMSpeciesDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + touch -r copasi/UI/CQEFMResultWidget.cpp copasi/UI/CQEFMResultWidget.cpp.new + mv copasi/UI/CQEFMResultWidget.cpp.new copasi/UI/CQEFMResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + touch -r copasi/UI/CQEFMReactionDM.cpp copasi/UI/CQEFMReactionDM.cpp.new + mv copasi/UI/CQEFMReactionDM.cpp.new copasi/UI/CQEFMReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + touch -r copasi/UI/CQEFMNetReactionDM.cpp copasi/UI/CQEFMNetReactionDM.cpp.new + mv copasi/UI/CQEFMNetReactionDM.cpp.new copasi/UI/CQEFMNetReactionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + touch -r copasi/UI/CQEFMListWidget.cpp copasi/UI/CQEFMListWidget.cpp.new + mv copasi/UI/CQEFMListWidget.cpp.new copasi/UI/CQEFMListWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + touch -r copasi/UI/CQDifferentialEquations.cpp copasi/UI/CQDifferentialEquations.cpp.new + mv copasi/UI/CQDifferentialEquations.cpp.new copasi/UI/CQDifferentialEquations.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + touch -r copasi/UI/CQDependencyWidget.cpp copasi/UI/CQDependencyWidget.cpp.new + mv copasi/UI/CQDependencyWidget.cpp.new copasi/UI/CQDependencyWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + touch -r copasi/UI/CQDependencyDialog.cpp copasi/UI/CQDependencyDialog.cpp.new + mv copasi/UI/CQDependencyDialog.cpp.new copasi/UI/CQDependencyDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + touch -r copasi/UI/CQDependenciesWidget.cpp copasi/UI/CQDependenciesWidget.cpp.new + mv copasi/UI/CQDependenciesWidget.cpp.new copasi/UI/CQDependenciesWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + touch -r copasi/UI/CQDateTimeEditDelegate.cpp copasi/UI/CQDateTimeEditDelegate.cpp.new + mv copasi/UI/CQDateTimeEditDelegate.cpp.new copasi/UI/CQDateTimeEditDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + touch -r copasi/UI/CQCrossSectionTaskWidget.cpp copasi/UI/CQCrossSectionTaskWidget.cpp.new + mv copasi/UI/CQCrossSectionTaskWidget.cpp.new copasi/UI/CQCrossSectionTaskWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + touch -r copasi/UI/CQCopasiApplication.cpp copasi/UI/CQCopasiApplication.cpp.new + mv copasi/UI/CQCopasiApplication.cpp.new copasi/UI/CQCopasiApplication.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + touch -r copasi/UI/CQCompartmentsWidget.cpp copasi/UI/CQCompartmentsWidget.cpp.new + mv copasi/UI/CQCompartmentsWidget.cpp.new copasi/UI/CQCompartmentsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + touch -r copasi/UI/CQCompartmentDM.cpp copasi/UI/CQCompartmentDM.cpp.new + mv copasi/UI/CQCompartmentDM.cpp.new copasi/UI/CQCompartmentDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + touch -r copasi/UI/CQCompartmentCopyOptions.cpp copasi/UI/CQCompartmentCopyOptions.cpp.new + mv copasi/UI/CQCompartmentCopyOptions.cpp.new copasi/UI/CQCompartmentCopyOptions.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + touch -r copasi/UI/CQCompartment.cpp copasi/UI/CQCompartment.cpp.new + mv copasi/UI/CQCompartment.cpp.new copasi/UI/CQCompartment.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + touch -r copasi/UI/CQComboDelegate.cpp copasi/UI/CQComboDelegate.cpp.new + mv copasi/UI/CQComboDelegate.cpp.new copasi/UI/CQComboDelegate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + touch -r copasi/UI/CQCheckModelWindow.cpp copasi/UI/CQCheckModelWindow.cpp.new + mv copasi/UI/CQCheckModelWindow.cpp.new copasi/UI/CQCheckModelWindow.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + touch -r copasi/UI/CQBrowserPaneDM.cpp copasi/UI/CQBrowserPaneDM.cpp.new + mv copasi/UI/CQBrowserPaneDM.cpp.new copasi/UI/CQBrowserPaneDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + touch -r copasi/UI/CQBrowserPane.cpp copasi/UI/CQBrowserPane.cpp.new + mv copasi/UI/CQBrowserPane.cpp.new copasi/UI/CQBrowserPane.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + touch -r copasi/UI/CQBaseTreeDataModel.cpp copasi/UI/CQBaseTreeDataModel.cpp.new + mv copasi/UI/CQBaseTreeDataModel.cpp.new copasi/UI/CQBaseTreeDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + touch -r copasi/UI/CQBaseDataModel.cpp copasi/UI/CQBaseDataModel.cpp.new + mv copasi/UI/CQBaseDataModel.cpp.new copasi/UI/CQBaseDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + touch -r copasi/UI/CQArrayAnnotationsWidgetDM.cpp copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new + mv copasi/UI/CQArrayAnnotationsWidgetDM.cpp.new copasi/UI/CQArrayAnnotationsWidgetDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + touch -r copasi/UI/CQArrayAnnotationsWidget.cpp copasi/UI/CQArrayAnnotationsWidget.cpp.new + mv copasi/UI/CQArrayAnnotationsWidget.cpp.new copasi/UI/CQArrayAnnotationsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + touch -r copasi/UI/CQAnalyticsWidget.cpp copasi/UI/CQAnalyticsWidget.cpp.new + mv copasi/UI/CQAnalyticsWidget.cpp.new copasi/UI/CQAnalyticsWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + touch -r copasi/UI/CProvenanceDialog.cpp copasi/UI/CProvenanceDialog.cpp.new + mv copasi/UI/CProvenanceDialog.cpp.new copasi/UI/CProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + touch -r copasi/UI/CProgressBar.cpp copasi/UI/CProgressBar.cpp.new + mv copasi/UI/CProgressBar.cpp.new copasi/UI/CProgressBar.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + touch -r copasi/UI/CMCAResultWidget.cpp copasi/UI/CMCAResultWidget.cpp.new + mv copasi/UI/CMCAResultWidget.cpp.new copasi/UI/CMCAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + touch -r copasi/UI/CMCAResultSubwidget.cpp copasi/UI/CMCAResultSubwidget.cpp.new + mv copasi/UI/CMCAResultSubwidget.cpp.new copasi/UI/CMCAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + touch -r copasi/UI/CLNAResultWidget.cpp copasi/UI/CLNAResultWidget.cpp.new + mv copasi/UI/CLNAResultWidget.cpp.new copasi/UI/CLNAResultWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + touch -r copasi/UI/CLNAResultSubwidget.cpp copasi/UI/CLNAResultSubwidget.cpp.new + mv copasi/UI/CLNAResultSubwidget.cpp.new copasi/UI/CLNAResultSubwidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + touch -r copasi/UI/CEntityProvenanceDialog.cpp copasi/UI/CEntityProvenanceDialog.cpp.new + mv copasi/UI/CEntityProvenanceDialog.cpp.new copasi/UI/CEntityProvenanceDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + touch -r copasi/UI/CCopasiSelectionWidget.cpp copasi/UI/CCopasiSelectionWidget.cpp.new + mv copasi/UI/CCopasiSelectionWidget.cpp.new copasi/UI/CCopasiSelectionWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + touch -r copasi/UI/CCopasiSelectionDialog.cpp copasi/UI/CCopasiSelectionDialog.cpp.new + mv copasi/UI/CCopasiSelectionDialog.cpp.new copasi/UI/CCopasiSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlotSelectionDialog.cpp copasi/UI/CCopasiPlotSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlotSelectionDialog.cpp.new copasi/UI/CCopasiPlotSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + touch -r copasi/UI/CCopasiPlot2YSelectionDialog.cpp copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new + mv copasi/UI/CCopasiPlot2YSelectionDialog.cpp.new copasi/UI/CCopasiPlot2YSelectionDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + touch -r copasi/UI/CColorScale.cpp copasi/UI/CColorScale.cpp.new + mv copasi/UI/CColorScale.cpp.new copasi/UI/CColorScale.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + touch -r copasi/UI/AboutDialog.cpp copasi/UI/AboutDialog.cpp.new + mv copasi/UI/AboutDialog.cpp.new copasi/UI/AboutDialog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + touch -r copasi/Provenance/CProvenanceXMLWriter.cpp copasi/Provenance/CProvenanceXMLWriter.cpp.new + mv copasi/Provenance/CProvenanceXMLWriter.cpp.new copasi/Provenance/CProvenanceXMLWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + touch -r copasi/OpenMP/CRandomContext.cpp copasi/OpenMP/CRandomContext.cpp.new + mv copasi/OpenMP/CRandomContext.cpp.new copasi/OpenMP/CRandomContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + touch -r copasi/OpenMP/CMathContext.cpp copasi/OpenMP/CMathContext.cpp.new + mv copasi/OpenMP/CMathContext.cpp.new copasi/OpenMP/CMathContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + touch -r copasi/OpenMP/CContext.cpp copasi/OpenMP/CContext.cpp.new + mv copasi/OpenMP/CContext.cpp.new copasi/OpenMP/CContext.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + touch -r copasi/MIRIAMUI/CQReferenceDM.cpp copasi/MIRIAMUI/CQReferenceDM.cpp.new + mv copasi/MIRIAMUI/CQReferenceDM.cpp.new copasi/MIRIAMUI/CQReferenceDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeViewItem.cpp copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeViewItem.cpp.new copasi/MIRIAMUI/CQRDFTreeViewItem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + touch -r copasi/MIRIAMUI/CQRDFTreeView.cpp copasi/MIRIAMUI/CQRDFTreeView.cpp.new + mv copasi/MIRIAMUI/CQRDFTreeView.cpp.new copasi/MIRIAMUI/CQRDFTreeView.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + touch -r copasi/MIRIAMUI/CQModifiedDM.cpp copasi/MIRIAMUI/CQModifiedDM.cpp.new + mv copasi/MIRIAMUI/CQModifiedDM.cpp.new copasi/MIRIAMUI/CQModifiedDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + touch -r copasi/MIRIAMUI/CQMiriamWidget.cpp copasi/MIRIAMUI/CQMiriamWidget.cpp.new + mv copasi/MIRIAMUI/CQMiriamWidget.cpp.new copasi/MIRIAMUI/CQMiriamWidget.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + touch -r copasi/MIRIAMUI/CQCreatorDM.cpp copasi/MIRIAMUI/CQCreatorDM.cpp.new + mv copasi/MIRIAMUI/CQCreatorDM.cpp.new copasi/MIRIAMUI/CQCreatorDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + touch -r copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new + mv copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp.new copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + touch -r copasi/MIRIAM/CReference.cpp copasi/MIRIAM/CReference.cpp.new + mv copasi/MIRIAM/CReference.cpp.new copasi/MIRIAM/CReference.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + touch -r copasi/MIRIAM/CRaptorInit.cpp copasi/MIRIAM/CRaptorInit.cpp.new + mv copasi/MIRIAM/CRaptorInit.cpp.new copasi/MIRIAM/CRaptorInit.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + touch -r copasi/MIRIAM/CRDFWriter.cpp copasi/MIRIAM/CRDFWriter.cpp.new + mv copasi/MIRIAM/CRDFWriter.cpp.new copasi/MIRIAM/CRDFWriter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + touch -r copasi/MIRIAM/CRDFUtilities.cpp copasi/MIRIAM/CRDFUtilities.cpp.new + mv copasi/MIRIAM/CRDFUtilities.cpp.new copasi/MIRIAM/CRDFUtilities.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + touch -r copasi/MIRIAM/CRDFTriplet.cpp copasi/MIRIAM/CRDFTriplet.cpp.new + mv copasi/MIRIAM/CRDFTriplet.cpp.new copasi/MIRIAM/CRDFTriplet.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + touch -r copasi/MIRIAM/CRDFSubject.cpp copasi/MIRIAM/CRDFSubject.cpp.new + mv copasi/MIRIAM/CRDFSubject.cpp.new copasi/MIRIAM/CRDFSubject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + touch -r copasi/MIRIAM/CRDFPredicate.cpp copasi/MIRIAM/CRDFPredicate.cpp.new + mv copasi/MIRIAM/CRDFPredicate.cpp.new copasi/MIRIAM/CRDFPredicate.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + touch -r copasi/MIRIAM/CRDFParser.cpp copasi/MIRIAM/CRDFParser.cpp.new + mv copasi/MIRIAM/CRDFParser.cpp.new copasi/MIRIAM/CRDFParser.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + touch -r copasi/MIRIAM/CRDFObject.cpp copasi/MIRIAM/CRDFObject.cpp.new + mv copasi/MIRIAM/CRDFObject.cpp.new copasi/MIRIAM/CRDFObject.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + touch -r copasi/MIRIAM/CRDFNode.cpp copasi/MIRIAM/CRDFNode.cpp.new + mv copasi/MIRIAM/CRDFNode.cpp.new copasi/MIRIAM/CRDFNode.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + touch -r copasi/MIRIAM/CRDFLiteral.cpp copasi/MIRIAM/CRDFLiteral.cpp.new + mv copasi/MIRIAM/CRDFLiteral.cpp.new copasi/MIRIAM/CRDFLiteral.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + touch -r copasi/MIRIAM/CRDFGraphConverter.cpp copasi/MIRIAM/CRDFGraphConverter.cpp.new + mv copasi/MIRIAM/CRDFGraphConverter.cpp.new copasi/MIRIAM/CRDFGraphConverter.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + touch -r copasi/MIRIAM/CRDFGraph.cpp copasi/MIRIAM/CRDFGraph.cpp.new + mv copasi/MIRIAM/CRDFGraph.cpp.new copasi/MIRIAM/CRDFGraph.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + touch -r copasi/MIRIAM/CModified.cpp copasi/MIRIAM/CModified.cpp.new + mv copasi/MIRIAM/CModified.cpp.new copasi/MIRIAM/CModified.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + touch -r copasi/MIRIAM/CModelMIRIAMInfo.cpp copasi/MIRIAM/CModelMIRIAMInfo.cpp.new + mv copasi/MIRIAM/CModelMIRIAMInfo.cpp.new copasi/MIRIAM/CModelMIRIAMInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + touch -r copasi/MIRIAM/CMIRIAMResource.cpp copasi/MIRIAM/CMIRIAMResource.cpp.new + mv copasi/MIRIAM/CMIRIAMResource.cpp.new copasi/MIRIAM/CMIRIAMResource.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + touch -r copasi/MIRIAM/CCreator.cpp copasi/MIRIAM/CCreator.cpp.new + mv copasi/MIRIAM/CCreator.cpp.new copasi/MIRIAM/CCreator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + touch -r copasi/MIRIAM/CConstants.cpp copasi/MIRIAM/CConstants.cpp.new + mv copasi/MIRIAM/CConstants.cpp.new copasi/MIRIAM/CConstants.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + touch -r copasi/MIRIAM/CBiologicalDescription.cpp copasi/MIRIAM/CBiologicalDescription.cpp.new + mv copasi/MIRIAM/CBiologicalDescription.cpp.new copasi/MIRIAM/CBiologicalDescription.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + touch -r copasi/CopasiUI/main.cpp copasi/CopasiUI/main.cpp.new + mv copasi/CopasiUI/main.cpp.new copasi/CopasiUI/main.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + touch -r copasi/CopasiSE/CopasiSE.cpp copasi/CopasiSE/CopasiSE.cpp.new + mv copasi/CopasiSE/CopasiSE.cpp.new copasi/CopasiSE/CopasiSE.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + touch -r copasi/CopasiSBW/SBWTranslator.cpp copasi/CopasiSBW/SBWTranslator.cpp.new + mv copasi/CopasiSBW/SBWTranslator.cpp.new copasi/CopasiSBW/SBWTranslator.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + touch -r copasi/CopasiDataModel/CInfo.cpp copasi/CopasiDataModel/CInfo.cpp.new + mv copasi/CopasiDataModel/CInfo.cpp.new copasi/CopasiDataModel/CInfo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + touch -r copasi/CopasiDataModel/CDataModel.cpp copasi/CopasiDataModel/CDataModel.cpp.new + mv copasi/CopasiDataModel/CDataModel.cpp.new copasi/CopasiDataModel/CDataModel.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + touch -r copasi/ABiochem/wattstrog.cpp copasi/ABiochem/wattstrog.cpp.new + mv copasi/ABiochem/wattstrog.cpp.new copasi/ABiochem/wattstrog.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + touch -r copasi/ABiochem/clo.cpp copasi/ABiochem/clo.cpp.new + mv copasi/ABiochem/clo.cpp.new copasi/ABiochem/clo.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + touch -r copasi/ABiochem/abiochem.cpp copasi/ABiochem/abiochem.cpp.new + mv copasi/ABiochem/abiochem.cpp.new copasi/ABiochem/abiochem.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + touch -r copasi/ABiochem/ab.cpp copasi/ABiochem/ab.cpp.new + mv copasi/ABiochem/ab.cpp.new copasi/ABiochem/ab.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + touch -r copasi/ABiochem/Erdos.cpp copasi/ABiochem/Erdos.cpp.new + mv copasi/ABiochem/Erdos.cpp.new copasi/ABiochem/Erdos.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + touch -r copasi/ABiochem/CGene.cpp copasi/ABiochem/CGene.cpp.new + mv copasi/ABiochem/CGene.cpp.new copasi/ABiochem/CGene.cpp + for file in `find copasi -type f \( -name "*.cpp" \)` + iconv -f ISO-8859-1 -t UTF-8 -o copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + touch -r copasi/ABiochem/1d.cpp copasi/ABiochem/1d.cpp.new + mv copasi/ABiochem/1d.cpp.new copasi/ABiochem/1d.cpp + echo 'Patch #0 (COPASI-fix_install_libpaths.patch):' Patch #0 (COPASI-fix_install_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_install_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 879 (offset 36 lines). patching file copasi/bindings/csharp/CMakeLists.txt Hunk #1 succeeded at 164 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/perl/CMakeLists.txt Hunk #1 succeeded at 158 (offset 5 lines). Hunk #2 succeeded at 175 (offset 5 lines). patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 163 (offset -2 lines). patching file copasi/bindings/java/CMakeLists.txt Hunk #1 succeeded at 159 (offset 8 lines). Hunk #2 succeeded at 192 (offset 8 lines). patching file copasi/bindings/octave/CMakeLists.txt Hunk #1 succeeded at 153 (offset 6 lines). Patch #4 (COPASI-fix_exe_permissions.patch): + echo 'Patch #4 (COPASI-fix_exe_permissions.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_exe_permissions --fuzz=0 patching file copasi/CopasiSE/CMakeLists.txt patching file copasi/CopasiUI/CMakeLists.txt Hunk #1 succeeded at 122 (offset 13 lines). Patch #6 (COPASI-libCombine_paths.patch): + echo 'Patch #6 (COPASI-libCombine_paths.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .libCombine_paths --fuzz=0 patching file CMakeModules/FindLIBCOMBINE.cmake Hunk #3 succeeded at 147 (offset 25 lines). Patch #7 (COPASI-find_crossguid2.patch): + echo 'Patch #7 (COPASI-find_crossguid2.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_crossguid2 --fuzz=0 patching file CMakeModules/FindCROSSGUID.cmake Hunk #2 succeeded at 35 (offset 1 line). Hunk #3 succeeded at 54 (offset 2 lines). Hunk #4 succeeded at 86 (offset 3 lines). Patch #8 (COPASI-use_c++17.patch): + echo 'Patch #8 (COPASI-use_c++17.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .use_c++17 --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 129 (offset 11 lines). Patch #9 (COPASI-find_libsedml.patch): + echo 'Patch #9 (COPASI-find_libsedml.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_libsedml --fuzz=0 patching file CMakeModules/FindLIBSEDML.cmake Patch #10 (COPASI-find_sbw.patch): + echo 'Patch #10 (COPASI-find_sbw.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .find_sbw --fuzz=0 patching file CMakeModules/FindSBW.cmake Patch #12 (COPASI-find_raptor.patch): + echo 'Patch #12 (COPASI-find_raptor.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .find_raptor --fuzz=0 patching file CMakeModules/FindRAPTOR.cmake Patch #13 (COPASI-qwt62.patch): + echo 'Patch #13 (COPASI-qwt62.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .qwt --fuzz=0 patching file copasi/plotUI/C2DCurveData.h patching file copasi/plotUI/C2DPlotCurve.h patching file copasi/plotUI/CBandedGraphData.h patching file copasi/plotUI/CHistoCurveData.h patching file copasi/plotUI/CLinearColorMap.h patching file copasi/plotUI/CPlotSpectogram.h patching file copasi/plotUI/CQwtPlot.cpp patching file copasi/plotUI/CQwtPlot.h patching file copasi/plotUI/CSpectorgramData.h patching file copasi/plotUI/scrollzoomer.cpp patching file copasi/plotUI/scrollzoomer.h Patch #14 (COPASI-4.41.283-fix_missing_header.patch): + echo 'Patch #14 (COPASI-4.41.283-fix_missing_header.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/plotUI/CQMarchingSquares.cpp Patch #15 (COPASI-find_qcp_libs.patch): + echo 'Patch #15 (COPASI-find_qcp_libs.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file CMakeModules/FindQCP.cmake Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch): + echo 'Patch #16 (COPASI-fix_swig_4.2.0_compatibility.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .backup --fuzz=0 patching file copasi/bindings/common/downcast_common.cpp Patch #11 (COPASI-porting_to_python310.patch): + echo 'Patch #11 (COPASI-porting_to_python310.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .porting_to_python310 --fuzz=0 patching file copasi/bindings/python/CMakeLists.txt Hunk #1 succeeded at 156 (offset 3 lines). Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch): + echo 'Patch #1 (COPASI-find_QWT5-QTMML-SBW.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 --fuzz=0 patching file CMakeModules/FindQWT.cmake Hunk #1 succeeded at 19 (offset -5 lines). Hunk #2 succeeded at 30 (offset -5 lines). patching file CMakeModules/FindMML.cmake + sed -e 's|@@libdir@@|/usr/lib64|g' -i CMakeModules/FindQWT.cmake Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch): + echo 'Patch #5 (COPASI-set_QWTPLOT3D_QT5.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .QWTPLOT3D_QT5 --fuzz=0 patching file CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_includedir@@|/usr/include/qt5/qwtplot3d-qt5|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@qtplot3d_libdir@@|/usr/lib64|g' -i CMakeModules/FindQWTPLOT3D.cmake + sed -e 's|@@_libmml_includedir@@|/usr/include/qt5/libmml-qt5|g' -i CMakeModules/FindMML.cmake + sed -e 's|@@_libmml_libdir@@|/usr/lib64|g' -i CMakeModules/FindMML.cmake + sed -i.bak '/double sqrt(doublereal);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double pow_dd(doublereal *, doublereal *);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/int s_copy(char *, char *, ftnlen, ftnlen);/d' copasi/optimization/CNL2SOL.cpp + sed -i.bak '/double sqrt(doublereal);/d' copasi/odepack++/dc_decsol.cpp + sed -i.bak '/double sqrt(doublereal),/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/double pow_dd(doublereal *,/d' copasi/odepack++/CRadau5.cpp + sed -i.bak '/C_FLOAT64 d_lg10(C_FLOAT64 *);/d' copasi/optimization/CPraxis.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.hFhIoZ + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -lbz2' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DCOPASI_OVERRIDE_VERSION:STRING=4.42.284 -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.12 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.12.so -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DENABLE_JIT:BOOL=OFF -DSELECT_QT=Qt5 -DSITE:STRING=fedora -DF2C_INTEGER=int -DF2C_LOGICAL=long '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG' -DCOPASI_INSTALL_C_API=OFF -DCombine_DIR:PATH=/usr/lib64/cmake '-DCMAKE_SHARED_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' '-DCMAKE_EXE_LINKER_FLAGS:STRING=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread' -DQT_QMAKE_EXECUTABLE:FILEPATH=/usr/bin/qmake-qt5 -DQWT_VERSION_STRING:STRING=6.2.0 -DQWT_LIBRARY:FILEPATH=/usr/lib64/libqwt-qt5.so -DQWT_INCLUDE_DIR:PATH=/usr/include/qt5/qwt -DBUILD_GUI:BOOL=ON -DBUILD_COPASISBW:BOOL=ON -DENABLE_MML:BOOL=ON -DENABLE_USE_SBMLUNIT=ON -DMML_INCLUDE_DIR:PATH=/usr/include/qt5/libmml-qt5 -DMML_LIBRARY:FILEPATH=/usr/lib64/libmml.so -DENABLE_SBW_INTEGRATION=ON -DBUILD_CXX_EXAMPLES=OFF -DENABLE_COPASI_BANDED_GRAPH:BOOL=ON -DENABLE_COPASI_SEDML:BOOL=ON -DENABLE_COPASI_NONLIN_DYN_OSCILLATION:BOOL=ON -DENABLE_COPASI_EXTUNIT:BOOL=ON -DCOPASI_OVERWRITE_USE_LAPACK:BOOL=ON -DNO_BLAS_WRAP:BOOL=ON -DBLA_VENDOR=Generic -DBLAS_blas_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DLAPACK_lapack_LIBRARY:FILEPATH=/usr/lib64/libflexiblas.so -DCROSSGUID_INCLUDE_DIR:PATH=/usr/include/crossguid2 -DENABLE_COPASI_PARAMETERFITTING_RESIDUAL_SCALING:BOOL=ON -DENABLE_WITH_MERGEMODEL:BOOL=ON -DENABLE_USE_MATH_CONTAINER:BOOL=ON -DLIBSBML_INCLUDE_DIR:PATH=/usr/include/sbml -DLIBSBML_SHARED:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBNUML_LIBRARY:FILEPATH=/usr/lib64/libnuml.so -DEXTRA_INCLUDE_DIRS:STRING=-I/usr/include/numl -DEXPAT_LIBRARY:FILEPATH=/usr/lib64/libexpat.so -DEXPAT_INCLUDE_DIR:PATH=/usr/include -DF2C_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DENABLE_GPROF:BOOL=OFF -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DENABLE_FLEX_BISON:BOOL=ON -DBISON_EXECUTABLE:FILEPATH=/usr/bin/bison -DPREFER_STATIC:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCOPASI_USE_QCUSTOMPLOT:BOOL=ON CMake Warning: No source or binary directory provided. Both will be assumed to be the same as the current working directory, but note that this warning will become a fatal error in future CMake releases. -- The C compiler identification is GNU 14.0.1 -- The CXX compiler identification is GNU 14.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Looking for strptime -- Looking for strptime - found -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of void* -- Check size of void* - done -- Check size of unsigned int -- Check size of unsigned int - done -- Check size of size_t -- Check size of size_t - done -- Performing Test EXPAT_EXPAT_TEST -- Performing Test EXPAT_EXPAT_TEST - Success -- Found EXPAT: /usr/lib64/libexpat.so (found version "2.5.0") -- Found LIBSBML: sbml -- Found LIBSEDML: /lib64/libsedml.so (found version "2.0.32") -- Found LIBCOMBINE: /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat (found version "0.2.20") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Found BISON: /usr/bin/bison (found version "3.8.2") -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- Looking for sgemm_ -- Looking for sgemm_ - found -- A library with BLAS API found. -- Looking for cheev_ -- Looking for cheev_ - found -- Found CLAPACK: /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so -- Found PkgConfig: /usr/bin/pkg-config (found version "1.9.5") -- Found LIBUUID: /usr/lib64/libuuid.so (found version "2.39.3") -- Found CROSSGUID: /usr/include/crossguid2 -- Found RAPTOR: /usr/lib64/libraptor.so (found version "1.4.21") -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found QCP: /usr/lib64/libqcustomplot-qt5.so -- Using Qt5 -- Found QWT: /usr/lib64/libqwt-qt5.so -- Found MML: /usr/lib64/libmml.so -- Found SBW: //usr/lib64/libSBW.so -- Found SWIG: /usr/bin/swig (found version "4.1.1") -- Mocing with options: -DWITH_TIME_SENS=1;-DWITH_QT5_VISUALIZATION=1;-DCOPASI_SBW_INTEGRATION=1;-DCOPASI_BANDED_GRAPH=1;-DCOPASI_NONLIN_DYN_OSCILLATION=1;-DQT_USE_TEXTBROWSER=1;-DCOPASI_USE_QWT=1;-DCOPASI_USE_QCUSTOMPLOT=1;-DQWT_VERSION=0x060200 -- Mocing files for subdir: barChart -- Mocing files for subdir: layoutUI -- Mocing files for subdir: MIRIAMUI -- Mocing files for subdir: plotUI -- Mocing files for subdir: tex -- Mocing files for subdir: UI -- Mocing files for subdir: wizard -- Mocing files for subdir: qlayout -- Mocing files for subdir: undoFramework -- Mocing files for subdir: undoUI -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /lib64/libz.so (found version "1.3.0.zlib-ng") -- Found PythonInterp: /usr/bin/python3 (found version "3.12.1") -- Found PythonLibs: /usr/lib64/libpython3.12.so (found version "3.12.1") -- Found Python: /usr/bin/python3.12 (found version "3.12.1") found components: Interpreter -- ----------------------------------------------------------- Building COPASI 4.42.284 (Release) Source Dir = /builddir/build/BUILD/COPASI-Build-284 Binary Dir = /builddir/build/BUILD/COPASI-Build-284 Install Prefix = /usr Dependencies: Vendor = Generic LAPACK Libs = /usr/lib64/libflexiblas.so;/usr/lib64/libflexiblas.so LAPACK LDFLAGS = crossguid Libs = /lib64/libcrossguid2.so;/usr/lib64/libuuid.so cross include = /usr/include/crossguid2 Expat version = 2.5.0 Expat Libs = /usr/lib64/libexpat.so Expat include = /usr/include Raptor version = 1.4.21 Raptor Libs = /usr/lib64/libraptor.so Raptor include = /usr/include libSBML version = libSBML lib = /usr/lib64/libsbml.so libSBML include = /usr/include/sbml Qt version = 5.15.12 Qt lib = Qt5::Concurrent;Qt5::Core;Qt5::Gui;Qt5::Widgets;Qt5::Network;Qt5::OpenGL;Qt5::PrintSupport;Qt5::Svg;Qt5::Xml;Qt5::DataVisualization Qt include = /usr/include/qt5/;/usr/include/qt5/QtConcurrent;/usr/include/qt5/QtCore;/usr/lib64/qt5//mkspecs/linux-g++;/usr/include/qt5/QtGui;/usr/include/qt5/QtWidgets;/usr/include/qt5/QtNetwork;/usr/include/qt5/QtOpenGL;/usr/include/qt5/QtPrintSupport;/usr/include/qt5/QtSvg;/usr/include/qt5/QtXml;/usr/include/qt5/QtDataVisualization QWT version = 6.2.0 (0x60200) QWT lib = /usr/lib64/libqwt-qt5.so QWT include = /usr/include/qt5/qwt qwtplot3d lib = qwtplot3d include = qtmml lib = /usr/lib64/libmml.so qtmml include = /usr/include/qt5/libmml-qt5 SBW version = SBW lib = //usr/lib64/libSBW.so SBW include = /usr/include libSEDML version = 2.0.32 libSEDML lib = /lib64/libsedml.so libSEDML include = /usr/include Combine version = 0.2.20 Combine lib = /usr/lib64/libCombine.so.0.2.20;z;sbml;Zipper;numl;sbml;xml2;bz2;z;m;dl;expat Combine include = /usr/include NativeJIT lib = NativeJIT include = NativeJIT CXX Flags = cpu_features lib = cpu_features include = OpenMP Libs = OpenMP CXX Flags = Options: COPASI_EXTUNIT = ON SBW integration = ON Model Merging = ON SEDML support = ON Combine Archive support = ON SDE support = ON GPROF support = OFF UNDO framework = ON Versioning framework = OFF Provenance framework = OFF Analytics Task = OFF Time Sensitivities task = ON JIT Compilation = OFF OpenMP = OFF CXX Flags = -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC Additional Defines = Linux;HAVE_F2C_H;LINUX Language Bindings: SWIG = /usr/bin/swig .NET Bindings = OFF Java Bindings = OFF Python Bindings = ON Perl Bindings = OFF Octave Bindings = OFF R Bindings = OFF Building: COPASI SE = ON COPASI UI = ON C++ Examples = OFF SBML TestRunner = OFF Franks TestRunner = OFF Semantic Testsuite = OFF Stochastic Testsuite = OFF Steady State TestRunner = OFF MCA TestRunner = OFF ----------------------------------------------------------- -- Configuring done (3.0s) -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP COPASI_OVERWRITE_USE_LAPACK CSHARP_COMPILER ENABLE_COPASI_SEDML ENABLE_USE_MATH_CONTAINER ENABLE_USE_SBMLUNIT ENABLE_WITH_MERGEMODEL QT_QMAKE_EXECUTABLE SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/COPASI-Build-284 + /usr/bin/cmake --build . -j2 --verbose Change Dir: '/builddir/build/BUILD/COPASI-Build-284' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile -j2 /usr/bin/cmake -S/builddir/build/BUILD/COPASI-Build-284 -B/builddir/build/BUILD/COPASI-Build-284 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles /builddir/build/BUILD/COPASI-Build-284//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASISE-core.dir/DependInfo.cmake "--color=" gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' gmake[2]: Nothing to be done for 'copasi/bindings/python/CMakeFiles/binding_python_swig.dir/build'. gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Built target binding_python_swig gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-core.dir/build.make copasi/CMakeFiles/libCOPASISE-core.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/CopasiDataModel/CInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:7: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CInfo.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CBiologicalDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:452:56: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 452 | static_cast< CTrajectoryTask * >(&mData.pTaskList->operator[]("Time-Course"))->load(inbuf); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::openCombineArchive(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2222:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2222 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2249:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2249 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2266:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2266 | while (numMessagesBefore < CCopasiMessage::size()) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2071:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 2071 | bool result = true; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::importSEDML(const std::string&, CProcessReport*, const bool&, const SedmlImportOptions*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2395:17: warning: unused variable ‘pSEDMLDocument’ [-Wunused-variable] 2395 | SedDocument * pSEDMLDocument = NULL; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2399:18: warning: unused variable ‘pSBMLDocument’ [-Wunused-variable] 2399 | SBMLDocument * pSBMLDocument = NULL; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2400:20: warning: unused variable ‘pLol’ [-Wunused-variable] 2400 | CListOfLayouts * pLol = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2401:29: warning: unused variable ‘pLotList’ [-Wunused-variable] 2401 | COutputDefinitionVector * pLotList = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp: In member function ‘bool CDataModel::exportSEDML(const std::string&, bool, int, int, bool, bool, CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.cpp:2593:17: warning: unused variable ‘pOrigSEDMLDocument’ [-Wunused-variable] 2593 | SedDocument * pOrigSEDMLDocument = NULL; | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CBiologicalDescription.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CConstants.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CConstants.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CCreator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CMIRIAMResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:434:1: warning: when initialized here [-Wreorder] 434 | CMIRIAMResource::CMIRIAMResource(const std::string & name, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:446:1: warning: when initialized here [-Wreorder] 446 | CMIRIAMResource::CMIRIAMResource(const CMIRIAMResource & src, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h: In constructor ‘CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:220:27: warning: ‘CMIRIAMResource::mpDeprecated’ will be initialized after [-Wreorder] 220 | CCopasiParameterGroup * mpDeprecated; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.h:215:10: warning: ‘bool* CMIRIAMResource::mpNamespaceEmbeddedInPattern’ [-Wreorder] 215 | bool * mpNamespaceEmbeddedInPattern; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CMIRIAMResource.cpp:458:1: warning: when initialized here [-Wreorder] 458 | CMIRIAMResource::CMIRIAMResource(const CCopasiParameterGroup & group, | ^~~~~~~~~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModelMIRIAMInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CModified.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModified.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraph.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFGraphConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFGraphConverter.cpp [ 0%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFLiteral.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFLiteral.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFNode.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFObject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFParser.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFPredicate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFPredicate.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFSubject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFSubject.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFTriplet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFTriplet.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFUtilities.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRDFWriter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp: In member function ‘char* CRDFWriter::write(const CRDFGraph*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRDFWriter.cpp:99:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 99 | bool success = true; | ^~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CRaptorInit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CRaptorInit.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/MIRIAM/CReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CReference.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CArrayElementReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArrayElementReference.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCommonName.cpp [ 1%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CCore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataArray.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp: In member function ‘void CDataObjectMap::objectRenamed(CDataObject*, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectMap.cpp:301:16: warning: unused variable ‘success’ [-Wunused-variable] 301 | bool success = (itMap->second.erase(pObject) > 0); | ^~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CDataTimer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRegisteredCommonName.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRegisteredCommonName.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/core/CRootContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CConfigurationFile.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h: In constructor ‘CRootContainer::CRootContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:75:23: warning: ‘CRootContainer::mpUnitDefinitionList’ will be initialized after [-Wreorder] 75 | CUnitDefinitionDB * mpUnitDefinitionList; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:73:23: warning: ‘CConfigurationFile* CRootContainer::mpConfiguration’ [-Wreorder] 73 | CConfigurationFile* mpConfiguration; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.cpp:38:1: warning: when initialized here [-Wreorder] 38 | CRootContainer::CRootContainer(const bool & withGUI): | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:114:1: warning: when initialized here [-Wreorder] 114 | CConfigurationFile::CConfigurationFile(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h: In constructor ‘CConfigurationFile::CConfigurationFile(const CConfigurationFile&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:577:10: warning: ‘CConfigurationFile::mpValidateUnits’ will be initialized after [-Wreorder] 577 | bool * mpValidateUnits; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:566:27: warning: ‘CCopasiParameterGroup* CConfigurationFile::mpDisplayIssueSeverity’ [-Wreorder] 566 | CCopasiParameterGroup * mpDisplayIssueSeverity; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.cpp:148:1: warning: when initialized here [-Wreorder] 148 | CConfigurationFile::CConfigurationFile(const CConfigurationFile & src, | ^~~~~~~~~~~~~~~~~~ [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/CLocaleString.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CLocaleString.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptionParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptionParser.cpp [ 2%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/commandline/COptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CEvaluationNodeNormalizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CEvaluationNodeNormalizer.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalCall.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalChoiceLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoiceLogical.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFraction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFraction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalFunction.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalGeneralPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalGeneralPower.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalItemPower.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItemPower.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalItem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLcm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLcm.cpp [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:39:16: required from here 39 | copySetOfSets(src.mChoices, this->mChoices); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ [ 3%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalLogicalItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogicalItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySetOfSets(const TemplateSetOfSets&, TemplateSetOfSets&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:41:16: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 41 | copySetOfSets(src.mAndSets, this->mAndSets); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 530 | bool tmpRes = target.insert(std::make_pair(tmpSet, it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:216:18: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: 216 | copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:530:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.cpp:494:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 494 | copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalProduct.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp: In copy constructor ‘CNormalProduct::CNormalProduct(const CNormalProduct&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalProduct.cpp:73:12: warning: unused variable ‘result’ [-Wunused-variable] 73 | bool result = this->mItemPowers.insert(pDestItemPower).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalSum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp: In copy constructor ‘CNormalSum::CNormalSum(const CNormalSum&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:93:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 93 | bool tmpRes = mProducts.insert(new CNormalProduct(*pTmpProduct)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalSum.cpp:102:12: warning: unused variable ‘tmpRes’ [-Wunused-variable] 102 | bool tmpRes = mFractions.insert(new CNormalFraction(**it2)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/CNormalTranslation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/ConvertToCEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CNormalFraction* CNormalTranslation::normAndSimplifyReptdly(const CEvaluationNode*, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:175:20: warning: unused variable ‘pFraction’ [-Wunused-variable] 175 | CNormalFraction* pFraction = dynamic_cast(base0); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp: In static member function ‘static CEvaluationNode* CNormalTranslation::newCancel(const CEvaluationNode*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.cpp:4076:34: warning: unused variable ‘pChild2’ [-Wunused-variable] 4076 | const CEvaluationNode* pChild2 = dynamic_cast(pChild1->getSibling()); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalChoiceLogical]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2637:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 2637 | CNormalLogical::copySet((*it).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h: In instantiation of ‘static void CNormalLogical::copySet(const TemplateSet&, TemplateSet&) [with TYPE = CNormalLogicalItem]’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/ConvertToCEvaluationNode.cpp:2647:44: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: 2647 | CNormalLogical::copySet((*it2).first, tmpSet); /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalLogical.h:262:14: warning: unused variable ‘tmpRes’ [-Wunused-variable] 262 | bool tmpRes = target.insert(std::make_pair(new TYPE(*it->first), it->second)).second; | ^~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/compareExpressions/compare_utilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalTranslation.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:27: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘bool contains_necessary_mass_action_elements(const CDataVector&, const CNormalProduct*, const CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:1226:25: warning: unused variable ‘pDatamodel’ [-Wunused-variable] 1226 | const CDataModel* pDatamodel = dynamic_cast(pModel->getObjectParent()); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp: In function ‘normalize_variable_names(CNormalBase*, std::map, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::less, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:266:54: warning: ‘this’ pointer is null [-Wnonnull] 266 | normalize_variable_names(&pChoice->getCondition(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:46:21: note: in a call to non-static member function ‘CNormalChoice::getCondition()’ 46 | CNormalLogical& getCondition(); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:267:59: warning: ‘this’ pointer is null [-Wnonnull] 267 | normalize_variable_names(&pChoice->getTrueExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:49:22: note: in a call to non-static member function ‘CNormalChoice::getTrueExpression()’ 49 | CNormalFraction& getTrueExpression(); | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/compare_utilities.cpp:268:60: warning: ‘this’ pointer is null [-Wnonnull] 268 | normalize_variable_names(&pChoice->getFalseExpression(), variableMap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/compareExpressions/CNormalChoice.h:52:22: note: in a call to non-static member function ‘CNormalChoice::getFalseExpression()’ 52 | CNormalFraction& getFalseExpression(); | ^~~~~~~~~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/crosssection/CCrossSectionTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCrossSectionProblem&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionProblem.cpp:95:21: warning: unused variable ‘pDataModel’ [-Wunused-variable] 95 | const CDataModel* pDataModel = o.getObjectDataModel(); | ^~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTree.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CBitPatternTreeNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternTreeNode.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMAlgorithm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp [ 4%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMAlgorithm.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CEFMTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CEFMTask.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxMode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxMode.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CFluxScore.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CFluxScore.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CStepMatrixColumn.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CStepMatrixColumn.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauLine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauLine.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CTableauMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CTableauMatrix.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/elementaryFluxModes/CZeroSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CZeroSet.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationParser_yacc.cpp [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationLexer_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationLexer_lex.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from CEvaluationParser.ypp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /raid/shoops/git/COPASI/copasi/function/CEvaluationLexer.lpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CCallParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::setCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:171:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 171 | switch (pFunctionParameter->getUsage()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp: In member function ‘CIssue CFunctionParameterMap::addCallParameter(std::string, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.cpp:217:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 217 | switch (pFunctionParameter->getUsage()) | ^ [ 5%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp: In member function ‘CEvaluationNode* CDerive::deriveBranch(const CEvaluationNode*, const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CDerive.cpp:508:25: warning: unused variable ‘tmpFunction’ [-Wunused-variable] 508 | const CFunction * tmpFunction = dynamic_cast(pENCall->getCalledTree()); | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp: In member function ‘bool CEvaluationNode::operator<(const CEvaluationNode&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.cpp:861:10: warning: enumeration value ‘UNIT’ not handled in switch [-Wswitch] 861 | switch (mainType()) | ^ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeCall.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.cpp:617: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeChoice.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeConstant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeChoice.cpp:276: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp: In member function ‘virtual ASTNode* CEvaluationNodeConstant::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 238 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:238:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeConstant.cpp:271: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeDelay.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual ASTNode* CEvaluationNodeFunction::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1079 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1079:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp: In member function ‘virtual std::string CEvaluationNodeFunction::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1507 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.cpp:1507:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeLogical.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In constructor ‘CEvaluationNodeLogical::CEvaluationNodeLogical(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 53 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:53:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CIssue CEvaluationNodeLogical::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 123 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:123:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::getUnit(const CMathContainer&, const std::vector&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 422 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In member function ‘virtual CValidatedUnit CEvaluationNodeLogical::setUnit(const CMathContainer&, const std::map&, std::map&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 458 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:458:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeLogical::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 553 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:553:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:492:10: warning: unused variable ‘i’ [-Wunused-variable] 492 | size_t i = 0; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeLogical.cpp:668: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeNumber.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In constructor ‘CEvaluationNodeNumber::CEvaluationNodeNumber(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 51 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:51:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp: In member function ‘virtual ASTNode* CEvaluationNodeNumber::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 240 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:240:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeNumber.cpp:275: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeOperator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In constructor ‘CEvaluationNodeObject::CEvaluationNodeObject(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 61 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:61:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual CIssue CEvaluationNodeObject::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 130 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:130:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual const CCopasiNode >::Data& CEvaluationNodeObject::getData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 332 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:332:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘virtual std::string CEvaluationNodeObject::getInfix(const std::vector >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 358 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:358:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp: In member function ‘void CEvaluationNodeObject::setObjectValuePtr(double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 554 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeObject.cpp:554:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In static member function ‘static CEvaluationNode* CEvaluationNodeOperator::fromAST(const ASTNode*, const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:390:10: warning: unused variable ‘i’ [-Wunused-variable] 390 | size_t i = 0, iMax = children.size(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual ASTNode* CEvaluationNodeOperator::toAST(const CDataModel*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 508 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:508:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1503: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp: In member function ‘virtual std::string CEvaluationNodeOperator::getMMLString(const std::vector >&, bool, const std::vector > >&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 1515 | switch (mSubType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeOperator.cpp:1515:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeStructure.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp: In constructor ‘CEvaluationNodeStructure::CEvaluationNodeStructure(const CEvaluationNode::SubType&, const CCopasiNode >::Data&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 40 | switch (subType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeStructure.cpp:40:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeUnit.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVariable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp [ 6%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVariable.cpp:118: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeVector.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationNodeWhiteSpace.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CEvaluationTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeWhiteSpace.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/fstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/copasi.h:55, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In member function ‘bool CEvaluationTree::setTree(const ASTNode&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:635:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 635 | switch (TargetType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:619:20: warning: unused variable ‘pErrorNode’ [-Wunused-variable] 619 | CEvaluationNode *pErrorNode = NULL; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp: In static member function ‘static CEvaluationNode* CEvaluationTree::fromAST(const ASTNode*, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_END_OF_CORE’ not handled in switch [-Wswitch] 684 | switch (itNode->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_QUOTIENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_RATE_OF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_FUNCTION_REM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_IMPLIES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CSYMBOL_FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_NORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_UNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BERNOULLI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_BINOMIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CAUCHY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_CHISQUARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_EXPONENTIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_GAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LAPLACE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_LOGNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_POISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_DISTRIB_FUNCTION_RAYLEIGH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SELECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_MATRIXROW’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_DETERMINANT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_TRANSPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_VECTOR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_SCALAR_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LINEAR_ALGEBRA_OUTER_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_EXISTS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_LOGICAL_FORALL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MEDIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MODE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_SDEV’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_VARIANCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_STATISTICS_MOMENTABOUT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_PRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_SUM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_LIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SERIES_TENDSTO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_GCD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_CONJUGATE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_ARG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_REAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_IMAGINARY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_ALGEBRA_LCM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_EQUIVALENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_APPROX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_RELATIONS_FACTOROF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_INT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_PARTIALDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LOWLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_UPLIMIT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_DIVERGENCE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_GRAD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_CURL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CALCULUS_LAPLACIAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_LIST’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_UNION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_INTERSECT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_IN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_PRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_NOTPRSUBSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_SETDIFF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARD’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_SET_THEORY_CARTESIANPRODUCT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANT_IMAGINARYI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_INTEGERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_REALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_RATIONALS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_NATURALNUMBERS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_COMPLEXES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_PRIMES’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EMPTYSET’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_CONSTANTS_EULERGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INTERVAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_INVERSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CONDITION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DECLARE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_COMPOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IDENT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_CODOMAIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_IMAGE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.cpp:684:18: warning: enumeration value ‘AST_BASIC_CONTENT_DOMAINOFAPPLICATION’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp: In member function ‘void CExpression::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:61:22: warning: unused variable ‘pObject’ [-Wunused-variable] 61 | CObjectInterface * pObject = | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.cpp:227: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParameters(const CFunctionParameters&, std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1197:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1197 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp: In static member function ‘static void CFunctionAnalyzer::constructCallParametersActualValues(std::vector&, const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionAnalyzer.cpp:1229:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1229 | switch (role) | ^ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CFunctionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp: In member function ‘size_t CFunctionParameters::findParameterByName(const std::string&, const CFunctionParameter**) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:199:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 199 | if (ppFunctionParameter != NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.cpp:195:10: warning: unused variable ‘imax’ [-Wunused-variable] 195 | size_t imax = mParameters.size(); | ^~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CKinFunction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CKinFunction.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CMassAction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CMassAction.cpp:151: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/function/CNodeK.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CAbstractLayoutInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CAbstractLayoutInterface.cpp [ 7%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CCopasiSpringLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CNodeK.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CCopasiSpringLayout.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLColorDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLColorDefinition.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLDefaultStyles.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLEllipse.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlobalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGlyphs.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientBase.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStop.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStop.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGradientStops.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGradientStops.cpp [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 8%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive1D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGraphicalPrimitive2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp: In member function ‘RenderGroup* CLGroup::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.cpp:884:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 884 | int result; | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImage.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLImageTexturizer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLImageTexturizer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLayoutRenderer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLineEnding.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLayoutRenderer.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLinearGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLinearGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalRenderInformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp: In member function ‘LocalRenderInformation* CLLocalRenderInformation::toSBML(unsigned int, unsigned int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.cpp:201:11: warning: unused variable ‘result’ [-Wunused-variable] 201 | int result = pLRI->addStyle(pStyle); | ^~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLLocalStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLPolygon.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRadialGradient.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRadialGradient.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLReactionGlyph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.cpp [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRectangle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 9%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRelAbsVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRelAbsVector.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCubicBezier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCubicBezier.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderFlattener.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderFlattener.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderInformationBase.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp: In member function ‘void CLRenderInformationBase::addSBMLAttributes(RenderInformationBase*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.cpp:439:7: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 439 | int result; | ^~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderPoint.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderPoint.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLRenderResolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLStyle.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLTransformation2D.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLUnresolvedReferenceException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLUnresolvedReferenceException.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayout.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp [ 10%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutEngine.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutEngine.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutInitializer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutInitializer.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CLayoutState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayoutState.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/CListOfLayouts.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/SBMLDocumentLoader.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp: In static member function ‘static CLayout* SBMLDocumentLoader::createLayout(const Layout&, const std::map, std::__cxx11::basic_string >&, std::map, std::__cxx11::basic_string >&, const std::map, std::__cxx11::basic_string >&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.cpp:272:10: warning: unused variable ‘count’ [-Wunused-variable] 272 | size_t count = idToKeyMap.size() + globalIdToKeyMap.size(); | ^~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/layout/utility_classes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/utility_classes.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp: In member function ‘int CLNAMethod::calculateCovarianceMatrixReduced()’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.cpp:303:21: warning: unused variable ‘pJacobian’ [-Wunused-variable] 303 | const C_FLOAT64 * pJacobian = mJacobianReduced.array(); | ^~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAProblem.cpp:91:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 91 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lna/CLNATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/lyap/CLyapWolfMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompiler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompiler.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 11%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitCompilerImplementation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CJitExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:9: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathContainer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/CConfigurationFile.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CJitCompilerImplementation.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDelay.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:315:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 315 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In constructor ‘CMathContainer::CMathContainer(CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:417:9: warning: ‘void* memset(void*, int, size_t)’ clearing an object of non-trivial type ‘struct CMathContainer::sSize’; use assignment or value-initialization instead [-Wclass-memaccess] 417 | memset(&mSize, 0, sizeof(mSize)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:58:10: note: ‘struct CMathContainer::sSize’ declared here 58 | struct sSize | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDelay.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createSynchronizeInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2581:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2581 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp: In member function ‘void CMathContainer::createApplyInitialValuesSequence()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:2720:20: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 2720 | switch (pObject->getSimulationType()) | ^ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp: In member function ‘std::string CMathDependencyGraph::getDOTNodeId(const CObjectInterface*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘Noise’ not handled in switch [-Wswitch] 651 | switch (pMathObject->getValueType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘ParticleNoise’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘TransitionTime’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyGraph.cpp:651:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNode.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDependencyNodeIterator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDependencyNodeIterator.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathDerive.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp: In member function ‘void CMathDerive::initOneVar(size_t, size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathDerive.cpp:41:16: warning: unused variable ‘pVMO’ [-Wunused-variable] 41 | CMathObject* pVMO = mpContainer->getMathObject(&mpContainer->getValues()[var]); | ^~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEnum.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathEventQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp: In static member function ‘static CEvaluationNode* CMathEvent::CTrigger::compileLE(const CEvaluationNode*, const std::vector&, const CMath::Variables&, CRootProcessor*&, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 979 | switch (pTriggerNode->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘POINTER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RUNIFORM’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RNORMAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RGAMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘RPOISSON’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.cpp:979:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h: In copy constructor ‘CMathEventQueue::CAction::CAction(const CMathEventQueue::CAction&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:190:23: warning: ‘CMathEventQueue::CAction::mpPriority’ will be initialized after [-Wreorder] 190 | const C_FLOAT64 * mpPriority; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.h:185:26: warning: ‘CVector CMathEventQueue::CAction::mValues’ [-Wreorder] 185 | CVector< C_FLOAT64 > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:85:1: warning: when initialized here [-Wreorder] 85 | CMathEventQueue::CAction::CAction(const CAction & src): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp: In constructor ‘CMathEventQueue::CAction::CAction(CMathEvent*, CMathEventQueue*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEventQueue.cpp:103:10: warning: enumeration value ‘Stop’ not handled in switch [-Wswitch] 103 | switch (pEvent->getType()) | ^ [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathExpression.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_construct.h:61, from /usr/include/c++/14/bits/stl_tempbuf.h:61, from /usr/include/c++/14/memory:66, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:18: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp: In member function ‘virtual CIssue CMathExpression::compile()’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch] 285 | switch ((*it)->subType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DELAY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘IF’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DOUBLE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FUNCTION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘POWER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPRESSION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXPONENTIALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INTEGER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LOG10’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MULTIPLY’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘OR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTOROPEN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COMMA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘DIVIDE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ENOTATION’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EXP’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘True’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘XOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘RATIONALE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AND’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘False’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MODULUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘VECTORCLOSE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘EQ’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘Infinity’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘PLUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NaN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MINUS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘REMAINDER’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘GE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘LE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘TANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘COTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTAN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSEC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSC’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSINH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOSH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCTANH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCSECH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCSCH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ARCCOTH’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SQRT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘ABS’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FLOOR’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘CEIL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘FACTORIAL’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘NOT’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MAX’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘MIN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘SIGN’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘AVOGADRO’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘INVALID’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.cpp:285:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathHistory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathHistory.cpp [ 12%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathObject.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathExpression.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::compile(CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayValue’ not handled in switch [-Wswitch] 643 | switch (mValueType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:643:10: warning: enumeration value ‘DelayLag’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathReaction.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createIntensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1833:22: warning: unused variable ‘pNumber’ [-Wunused-variable] 1833 | CObjectInterface * pNumber = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1834:22: warning: unused variable ‘pCompartment’ [-Wunused-variable] 1834 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp: In member function ‘bool CMathObject::createExtensiveValueExpression(const CMetab*, CMathContainer&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1868:22: warning: variable ‘pIntensiveValue’ set but not used [-Wunused-but-set-variable] 1868 | CObjectInterface * pIntensiveValue = NULL; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathObject.cpp:1869:22: warning: variable ‘pCompartment’ set but not used [-Wunused-but-set-variable] 1869 | CObjectInterface * pCompartment = NULL; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/math/CMathUpdateSequence.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathUpdateSequence.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_yacc.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser_lex.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CAnnotation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEq.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CCreator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEq.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp: In member function ‘void CAnnotation::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CAnnotation.cpp:160:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 160 | switch (type) | ^ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqElement.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqInterface.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CChemEqParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqParser.cpp [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CEvent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMMLOutput.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp: In static member function ‘static void CMMLOutput::writeDifferentialEquations(std::ostream&, CModel*, bool, bool, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMMLOutput.cpp:284:8: warning: variable ‘hasContents’ set but not used [-Wunused-but-set-variable] 284 | bool hasContents = false; | ^~~~~~~~~~~ [ 13%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetab.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMetabNameInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelAnalyzer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:61: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h: In constructor ‘CModel::CModel(CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1220:86: warning: ‘CModel::mReactionsPerSpecies’ will be initialized after [-Wreorder] 1220 | std::map < const CMetab *, std::set< std::pair< const CReaction *, C_FLOAT64 > > > mReactionsPerSpecies; | ^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: warning: ‘CDataVectorN CModel::mValues’ [-Wreorder] 1205 | CDataVectorN< CModelValue > mValues; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:202:1: warning: when initialized here [-Wreorder] 202 | CModel::CModel(CDataContainer* pParent): | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘bool CModel::handleUnusedMetabolites()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:928:23: warning: variable ‘pStoiEnd’ set but not used [-Wunused-but-set-variable] 928 | C_FLOAT64 * pStoi, *pStoiEnd, *pRowEnd; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2579: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In function ‘const CObjectInterface* getDependentOrNull(const std::map&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 2598 | if (it->second == index) return it->first; | ~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp: In member function ‘CReactionResult CModelAnalyzer::checkReaction(const CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelAnalyzer.cpp:196:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 196 | switch (role) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2618:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: 2618 | const CFitTask* task = dynamic_cast(&dataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:2598:22: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp: In member function ‘void CModel::updateInitialValues(std::set&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.cpp:3439:8: warning: unused variable ‘success’ [-Wunused-variable] 3439 | bool success = compileIfNecessary(NULL); | ^~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelExpansion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelExpansion.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In member function ‘virtual CUndoObjectInterface* CModelParameterSet::insert(const CData&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:84:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 84 | switch (CModelParameter::TypeNames.toEnum(data.getProperty(CData::OBJECT_TYPE).toString(), CModelParameter::Type::unknown)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const std::string&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 150 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:150:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:139:1: warning: when initialized here [-Wreorder] 139 | CModelParameterSet::CModelParameterSet(const std::string & name, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp: In constructor ‘CModelParameterSet::CModelParameterSet(const CModelParameterSet&, const CDataContainer*, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CAnnotation’ will be initialized after [-Wreorder] 185 | mpReactions(NULL) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:185:19: warning: base ‘CModelParameterGroup’ [-Wreorder] /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelParameterSet::CModelParameterSet(const CModelParameterSet & src, | ^~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const std::string&, const CDataContainer*, const std::string&, const CFlags&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:173:1: warning: when initialized here [-Wreorder] 173 | CModelEntity::CModelEntity(const std::string & name, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h: In constructor ‘CModelEntity::CModelEntity(const CModelEntity&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:477:20: warning: ‘CModelEntity::mpModel’ will be initialized after [-Wreorder] 477 | mutable CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:458:15: warning: ‘std::string CModelEntity::mUnitExpression’ [-Wreorder] 458 | std::string mUnitExpression; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.cpp:200:1: warning: when initialized here [-Wreorder] 200 | CModelEntity::CModelEntity(const CModelEntity & src, | ^~~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CMoiety.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CObjectLists.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CChemEqElement.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp: In member function ‘void CMoiety::initObjects()’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.cpp:122:17: warning: unused variable ‘pObject’ [-Wunused-variable] 122 | CDataObject * pObject = addObjectReference("Amount", mIAmount, CDataObject::ValueDbl); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CObjectLists.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReaction.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CReactionInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp: In member function ‘std::string CReaction::getReactionScheme() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.cpp:2314:15: warning: unused variable ‘pModel’ [-Wunused-variable] 2314 | CDataModel* pModel = getObjectDataModel(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObjectReference.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘CUndoData CReactionInterface::createUndoData(const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:454:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 454 | switch (framework) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:508:27: warning: unused variable ‘pObject’ [-Wunused-variable] 508 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:568:27: warning: unused variable ‘pObject’ [-Wunused-variable] 568 | const CDataObject * pObject = NULL; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::vector > CReactionInterface::getUnitVector(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1295:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1295 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getUnit(size_t) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1347:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 1347 | switch (getUsage(index)) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp: In member function ‘std::string CReactionInterface::getEffectiveKineticLawUnit() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘Default’ not handled in switch [-Wswitch] 1683 | switch (getEffectiveKineticLawUnitType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.cpp:1683:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/model/CState.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CState.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 14%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesProblem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/moieties/CMoietiesTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CInternalSolver.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CInternalSolver.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/moieties/CMoietiesTask.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODA.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CLSODAR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CLSODAR.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/CRadau5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In member function ‘int CRadau5::operator()(int*, evalF, double*, double*, double*, double*, double*, double*, int*, evalJ, int*, int*, int*, evalM, int*, int*, int*, evalO, int*, double*, int*, int*, int*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:127:17: warning: unused variable ‘io___10’ [-Wunused-variable] 127 | static cilist io___10 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:128:17: warning: unused variable ‘io___12’ [-Wunused-variable] 128 | static cilist io___12 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:129:17: warning: unused variable ‘io___15’ [-Wunused-variable] 129 | static cilist io___15 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:130:17: warning: unused variable ‘io___17’ [-Wunused-variable] 130 | static cilist io___17 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:131:17: warning: unused variable ‘io___19’ [-Wunused-variable] 131 | static cilist io___19 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:132:17: warning: unused variable ‘io___24’ [-Wunused-variable] 132 | static cilist io___24 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:133:17: warning: unused variable ‘io___29’ [-Wunused-variable] 133 | static cilist io___29 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:134:17: warning: unused variable ‘io___31’ [-Wunused-variable] 134 | static cilist io___31 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:135:17: warning: unused variable ‘io___33’ [-Wunused-variable] 135 | static cilist io___33 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:136:17: warning: unused variable ‘io___36’ [-Wunused-variable] 136 | static cilist io___36 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:137:17: warning: unused variable ‘io___39’ [-Wunused-variable] 137 | static cilist io___39 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:138:17: warning: unused variable ‘io___43’ [-Wunused-variable] 138 | static cilist io___43 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:139:17: warning: unused variable ‘io___50’ [-Wunused-variable] 139 | static cilist io___50 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:140:17: warning: unused variable ‘io___52’ [-Wunused-variable] 140 | static cilist io___52 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:141:17: warning: unused variable ‘io___68’ [-Wunused-variable] 141 | static cilist io___68 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:142:17: warning: unused variable ‘io___72’ [-Wunused-variable] 142 | static cilist io___72 = {0, 6, 0, 0, 0 }; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: In function ‘int radcor_(int*, CRadau5::evalF, double*, double*, double*, double*, double*, double*, double*, int*, CRadau5::evalJ, int*, int*, int*, CRadau5::evalM, int*, int*, CRadau5::evalO, int*, int*, int*, double*, double*, double*, double*, double*, double*, int*, int*, long int*, int*, int*, int*, long int*, double*, double*, int*, int*, int*, long int*, long int*, int*, int*, int*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, double*, int*, int*, int*, double*, int*, int*, int*, int*, int*, int*, int*, double*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1071:20: warning: variable ‘index1’ set but not used [-Wunused-but-set-variable] 1071 | static C_LOGICAL index1, index2, index3, caljac; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1107:17: warning: unused variable ‘io___176’ [-Wunused-variable] 1107 | static cilist io___176 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1108:17: warning: unused variable ‘io___177’ [-Wunused-variable] 1108 | static cilist io___177 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1109:17: warning: unused variable ‘io___178’ [-Wunused-variable] 1109 | static cilist io___178 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1110:17: warning: unused variable ‘io___179’ [-Wunused-variable] 1110 | static cilist io___179 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1111:17: warning: unused variable ‘io___180’ [-Wunused-variable] 1111 | static cilist io___180 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1112:17: warning: unused variable ‘io___181’ [-Wunused-variable] 1112 | static cilist io___181 = {0, 6, 0, 0, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:1113:17: warning: unused variable ‘io___182’ [-Wunused-variable] 1113 | static cilist io___182 = {0, 6, 0, fmt_979, 0 }; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:53:14: warning: ‘c__3’ defined but not used [-Wunused-variable] 53 | static C_INT c__3 = 3; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:52:14: warning: ‘c__5’ defined but not used [-Wunused-variable] 52 | static C_INT c__5 = 5; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:51:14: warning: ‘c__1’ defined but not used [-Wunused-variable] 51 | static C_INT c__1 = 1; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/CRadau5.cpp:50:14: warning: ‘c__9’ defined but not used [-Wunused-variable] 50 | static C_INT c__9 = 9; | ^~~~ [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/Cxerrwd.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/Cxerrwd.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/common.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/common.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dbnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dbnorm.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dc_decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dc_decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dcfode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dcfode.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/decsol.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/decsol.cpp [ 15%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dewset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dewset.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dfnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dfnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dintdy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dintdy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dmnorm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dmnorm.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dprja.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dprja.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/drcheck.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/drcheck.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dsolsy.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dsolsy.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/odepack++/dstoda.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/odepack++/dstoda.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CMathContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/OpenMP/CRandomContext.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In destructor ‘CRandomContext::~CRandomContext()’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:17:1: warning: label ‘Base’ defined but not used [-Wunused-label] 17 | Base: master() = NULL; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp: In member function ‘void CRandomContext::init(CRandom::Type, unsigned int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CRandomContext.cpp:28:1: warning: label ‘Base’ defined but not used [-Wunused-label] 28 | Base: master() = NULL; | ^~~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9831:3: warning: "/*" within comment [-Wcomment] 9831 | /* ret_val = i1mach_(&mdperm[*k - 1]); */ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘doublereal d1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:391:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 391 | fprintf(stderr, "invalid argument: d1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int da7sst_(integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:1090:17: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 1090 | if (v[6] > 0. && v[6] <= emax || v[6] == 0. && v[7] == 0.) | ~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dg7itb_(doublereal*, doublereal*, doublereal*, integer*, integer*, integer*, integer*, integer*, doublereal*, doublereal*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:2092:41: warning: variable ‘rstrst’ set but not used [-Wunused-but-set-variable] 2092 | static integer td1, tg1, lstgst, pp1, rstrst; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘int dparck_(integer*, doublereal*, integer*, integer*, integer*, integer*, doublereal*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6647:15: warning: unused variable ‘vn’ [-Wunused-variable] 6647 | static char vn[4 * 2 * 34] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6663:15: warning: unused variable ‘varnm’ [-Wunused-variable] 6663 | static char varnm[1 * 2] = ""; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:6664:15: warning: unused variable ‘sh’ [-Wunused-variable] 6664 | static char sh[1 * 2] = ""; | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i1mach_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9778:47: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘integer’ {aka ‘int’} [-Wformat=] 9778 | fprintf(stderr, "invalid argument: i1mach(%ld)\n", *i); | ~~^ ~~ | | | | | integer {aka int} | long int | %d /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp: In function ‘integer i7mdcn_(integer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CNL2SOL.cpp:9833:43: warning: suggest parentheses around ‘-’ inside ‘<<’ [-Wparentheses] 9833 | ret_val = i1mach_(&mdperm[(0 + (0 + (*k - 1 << 2))) / 4]); | ~~~^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp: In member function ‘void COptItem::updatePrerequisites(const std::vector&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:503:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 503 | std::vector< COptItem * >::const_iterator it = influencingIntervals.begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptItem.cpp:504:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 504 | std::vector< COptItem * >::const_iterator end = influencingIntervals.end(); | ^~~ [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLog.cpp [ 16%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogEntry.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptLogItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptLogItem.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodCoranaWalk.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodDE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodDE.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodEP.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodEP.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGA.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodGASR.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodGASR.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodHookeJeeves.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodHookeJeeves.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodLevenbergMarquardt.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp: In member function ‘virtual bool COptMethodLevenbergMarquardt::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodLevenbergMarquardt.cpp:132:28: warning: variable ‘nrhs’ set but not used [-Wunused-but-set-variable] 132 | C_INT dim, starts, info, nrhs; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNL2SOL.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNL2SOL.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodNelderMead.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:107: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 107 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:120: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 120 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:201: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 201 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:342: warning: ignoring ‘#pragma omp critical’ [-Wunknown-pragmas] 342 | #pragma omp critical /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:626: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 626 | #pragma omp parallel for schedule(runtime) /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:646: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 646 | #pragma omp parallel for schedule(runtime) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodNelderMead.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp: In member function ‘bool COptMethodPS::reachedStdDeviation()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPS.cpp:482:15: warning: unused variable ‘pEnd’ [-Wunused-variable] 482 | C_FLOAT64 * pEnd = pValue + mPopulationSize; | ^~~~ [ 17%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp: In member function ‘virtual bool COptMethodPraxis::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:99:13: warning: variable ‘tmp’ set but not used [-Wunused-but-set-variable] 99 | C_FLOAT64 tmp = 0.0; | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodPraxis.cpp:100:13: warning: variable ‘machep’ set but not used [-Wunused-but-set-variable] 100 | C_FLOAT64 machep, stepmx, d1, d2; | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSA.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSRES.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSRES.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSS.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodStatistics.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp: In member function ‘bool COptMethodSS::combination()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:820:13: warning: variable ‘la’ set but not used [-Wunused-but-set-variable] 820 | C_FLOAT64 la; // for orders of magnitude | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSS.cpp:827:22: warning: variable ‘xprval’ set but not used [-Wunused-but-set-variable] 827 | C_FLOAT64 xnewval, xprval; // to hold temp value of "parent" in go-beyond strategy | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp: In member function ‘virtual bool COptMethodStatistics::optimise()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodStatistics.cpp:93:8: warning: variable ‘Continue’ set but not used [-Wunused-but-set-variable] 93 | bool Continue = true; | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodSteepestDescent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodSteepestDescent.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptMethodTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp: In member function ‘int COptMethodTruncatedNewton::sFun(int*, double*, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodTruncatedNewton.cpp:328:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 328 | for (size_t i = 0; i < mVariableSize; i++, g++) | ~~^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptPopulationMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/COptTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:84:1: warning: when initialized here [-Wreorder] 84 | COptProblem::COptProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h: In constructor ‘COptProblem::COptProblem(const COptProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:662:13: warning: ‘COptProblem::mSolutionValue’ will be initialized after [-Wreorder] 662 | C_FLOAT64 mSolutionValue; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:657:12: warning: ‘COptProblem::sCounter COptProblem::mCounters’ [-Wreorder] 657 | sCounter mCounters; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:129:1: warning: when initialized here [-Wreorder] 129 | COptProblem::COptProblem(const COptProblem & src, | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual void COptProblem::calculateValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:184:45: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 184 | std::vector< COptItem * >::const_iterator it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:185:45: warning: variable ‘end’ set but not used [-Wunused-but-set-variable] 185 | std::vector< COptItem * >::const_iterator end = mpOptItems->end(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘double COptProblem::evalMinimizeIntervals(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:826:23: warning: unused variable ‘SQRT_EPSILON’ [-Wunused-variable] 826 | static const double SQRT_EPSILON = sqrt(std::numeric_limits< double >::epsilon()); | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp: In member function ‘virtual bool COptProblem::setSolution(const double&, const CVector&, const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.cpp:1014:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 1014 | if (variables.size() != 0) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CPraxis.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘double CPraxis::operator()(double, double, int, int, double*, FPraxis*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:1097:11: warning: variable ‘seed’ set but not used [-Wunused-but-set-variable] 1097 | C_INT32 seed; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp: In member function ‘CPraxis::minfit(int, double, double*, double*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:337:11: warning: ‘f’ may be used uninitialized [-Wmaybe-uninitialized] 337 | if (0.0 <= f) | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CPraxis.cpp:236:13: note: ‘f’ was declared here 236 | C_FLOAT64 f; | ^ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRandomSearch.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CRealProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRandomSearch.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.h:53, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CRealProblem.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 18%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/CTruncatedNewton.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/optimization/FminBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/FminBrent.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqn_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:387:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 387 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:391:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 391 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:401:27: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 401 | C_FLOAT64 gnorm, ftest, fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In member function ‘int CTruncatedNewton::lmqnbc_(int*, int*, double*, double*, double*, double*, int*, FTruncatedNewton*, double*, double*, int*, int*, int*, int*, double*, double*, double*, double*, COptLog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:761:13: warning: variable ‘fold’ set but not used [-Wunused-but-set-variable] 761 | C_FLOAT64 fold, oldf; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:766:9: warning: variable ‘lhyr’ set but not used [-Wunused-but-set-variable] 766 | C_INT lhyr; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:777:13: warning: variable ‘fstop’ set but not used [-Wunused-but-set-variable] 777 | C_FLOAT64 fstop, pnorm, rteps, xnorm; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp: In function ‘int initp3_(double*, double*, int*, int*, double*, double*, double*, double*, double*, double*, double*, int*, int*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/CTruncatedNewton.cpp:2398:13: warning: variable ‘cond’ set but not used [-Wunused-but-set-variable] 2398 | C_FLOAT64 cond; | ^~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/output/COutputHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/output/COutputHandler.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperiment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentFileInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentFileInfo.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp: In member function ‘double CExperiment::getErrorMeanSD(const CObjectInterface*, const double&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.cpp:1673:20: warning: unused variable ‘pScale’ [-Wunused-variable] 1673 | const C_FLOAT64 *pScale = mScale.array() + it->second; | ^~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentObjectMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentObjectMap.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CExperimentSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataTimer.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/parameterFitting/CFitTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:342:85: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 342 | pTasks = dynamic_cast *>(getObjectAncestor("Vector")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual bool CFitProblem::calculate()’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1046:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1046 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1094:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1094 | for (j = 0; j < kmax && Continue; j++) // For each data row; | ~~^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1195:34: warning: variable ‘it’ set but not used [-Wunused-but-set-variable] 1195 | auto it = mpOptItems->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp: In member function ‘virtual void CFitProblem::updateContainer(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.cpp:1333:17: warning: variable ‘pExp’ set but not used [-Wunused-but-set-variable] 1333 | CExperiment * pExp = NULL; | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptTask.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/COutputDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotColors.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/plot/CPlotSpecification.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp [ 19%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CPermutation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CPermutation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/CRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/CRandom.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cmt19937.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cmt19937.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/randomGenerator/Cr250.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/randomGenerator/Cr250.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CKeyFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CKeyFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In constructor ‘CDataHandler::CDataHandler(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:26:1: warning: when initialized here [-Wreorder] 26 | CDataHandler::CDataHandler(bool separate) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h: In copy constructor ‘CDataHandler::CDataHandler(const CDataHandler&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:35:37: warning: ‘CDataHandler::mAfterObjectList’ will be initialized after [-Wreorder] 35 | std::vector< CObjectInterface * > mAfterObjectList; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘std::vector CDataHandler::mDuringObjectList’ [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:34:37: warning: ‘CDataHandler::mDuringObjectList’ will be initialized after [-Wreorder] 34 | std::vector< CObjectInterface * > mDuringObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.h:33:37: warning: ‘std::vector CDataHandler::mBeforeObjectList’ [-Wreorder] 33 | std::vector< CObjectInterface * > mBeforeObjectList; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:40:1: warning: when initialized here [-Wreorder] 40 | CDataHandler::CDataHandler(const CDataHandler & src) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp: In member function ‘virtual void CDataHandler::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CDataHandler.cpp:171:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 171 | switch (activity) | ^ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/COutputAssistant.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp: In member function ‘virtual void CReport::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReport.cpp:136:10: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 136 | switch (activity) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/COutputAssistant.cpp:723:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 723 | CCopasiTask * pTask = &pDataModel->getTaskList()->operator[]("Parameter Estimation"); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportBody.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportBody.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h: In constructor ‘CReportDefinition::CReportDefinition(const CReportDefinition&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:68:20: warning: ‘CReportDefinition::mPrecision’ will be initialized after [-Wreorder] 68 | unsigned C_INT32 mPrecision; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.h:60:38: warning: ‘std::vector CReportDefinition::mHeaderVector’ [-Wreorder] 60 | std::vector mHeaderVector; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinition.cpp:143:1: warning: when initialized here [-Wreorder] 143 | CReportDefinition::CReportDefinition(const CReportDefinition & src, | ^~~~~~~~~~~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/report/CReportDefinitionVector.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CCellDesignerImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/CSBMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static REACTION_TYPE CCellDesignerImporter::reactionTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4866:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4866 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_LINK_TYPE CCellDesignerImporter::modificationLinkTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:4954:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 4954 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static MODIFICATION_TYPE CCellDesignerImporter::modificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:5022:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 5022 | bool status; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp: In static member function ‘static SPECIES_MODIFICATION_TYPE CCellDesignerImporter::speciesModificationTypeToEnum(std::string)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CCellDesignerImporter.cpp:10901:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 10901 | bool status; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameter.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLDefaultStyles.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:80: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:97: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In function ‘void addSymbolComponentToUnitDefinition(UnitDefinition*, CUnit::SymbolComponent&, const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3109:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3109 | if (unitKind != C_INVALID_INDEX && use_d_prefix) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3114:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 3114 | if (unitKind == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘void CSBMLExporter::addInitialAssignmentsToModel(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3397:11: warning: unused variable ‘result’ [-Wunused-variable] 3397 | int result = model->addParameter(param); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In member function ‘bool CSBMLExporter::createSBMLDocument(CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:3741:15: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 3741 | int result; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp: In static member function ‘static XMLNode* CSBMLExporter::createSBMLNotes(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8125:31: warning: unused variable ‘tmp’ [-Wunused-variable] 8125 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", prefix); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.cpp:8191:27: warning: unused variable ‘tmp’ [-Wunused-variable] 8191 | int tmp = pResult->addNamespace("http://www.w3.org/1999/xhtml", ""); | ^~~ [ 20%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/ConverterASTNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/ConverterASTNode.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:72: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:79: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:195:18: warning: ‘virtual CIssue CEvaluationTree::compile()’ was hidden [-Woverloaded-virtual=] 195 | virtual CIssue compile(); | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:81: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:96:18: note: by ‘virtual CIssue CExpression::compile(CObjectInterface::ContainerList)’ 96 | virtual CIssue compile(CObjectInterface::ContainerList listOfContainer = | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:84: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:34: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalStyle.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/SBMLDocumentLoader.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:100: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:101: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::replaceAmountReferences(ConverterASTNode*, Model*, double, std::map&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:3620:43: warning: variable ‘pSpecies’ set but not used [-Wunused-but-set-variable] 3620 | ASTNode *pAvogadro = NULL, *pSpecies = NULL; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp: In member function ‘void SBMLImporter::applyConversionFactors()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.cpp:7861:25: warning: variable ‘pE’ set but not used [-Wunused-but-set-variable] 7861 | const CChemEqElement* pE = NULL; | ^~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLIncompatibility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLIncompatibility.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLReference.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLReference.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUnitSupport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::importUnitsFromSBMLDocument(Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:172:24: warning: unused variable ‘pUDef’ [-Wunused-variable] 172 | UnitDefinition * pUDef = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp: In member function ‘void SBMLUnitSupport::checkElementUnits(const Model*, CModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1042:8: warning: variable ‘inconsistentDimensionlessUnits’ set but not used [-Wunused-but-set-variable] 1042 | bool inconsistentDimensionlessUnits = false; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1043:8: warning: unused variable ‘defaultVolumeUsed’ [-Wunused-variable] 1043 | bool defaultVolumeUsed = false; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1044:8: warning: unused variable ‘defaultAreaUsed’ [-Wunused-variable] 1044 | bool defaultAreaUsed = false; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUnitSupport.cpp:1045:8: warning: unused variable ‘defaultLengthUsed’ [-Wunused-variable] 1045 | bool defaultLengthUsed = false; | ^~~~~~~~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/SBMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLUtils.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbml/StdException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/StdException.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunit.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/CSBMLunitInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/CSBMLunitInterface.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/copasimathml.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMML.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sbmlunit/Expression2PresentationMMLUnits.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sbmlunit/Expression2PresentationMMLUnits.cpp [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘bool CScanMethod::loop(size_t)’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:574:10: warning: unused variable ‘failCounter’ [-Wunused-variable] 574 | size_t failCounter = 0; | ^~~~~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp: In member function ‘CScanItemRandom::step()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:388:22: warning: ‘Value’ may be used uninitialized [-Wmaybe-uninitialized] 388 | *mpObjectValue = Value; | ~~~~~~~~~~~~~~~^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.cpp:339:13: note: ‘Value’ was declared here 339 | C_FLOAT64 Value; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.cpp:92:34: required from here 92 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 21%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/scan/CScanTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp: In member function ‘bool CScanTask::processCallback()’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 201 | if (success && !mOutputInSubtask) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:261:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: 261 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.cpp:201:6: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:492:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 492 | (&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp: In member function ‘bool CSensMethod::initialize(CSensProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensMethod.cpp:484:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 484 | switch (mpProblem->getSubTaskType()) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:322:34: required from here 322 | CDataVectorN< CCopasiTask >::iterator it = pDataModel->getTaskList()->begin(); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleTargetFunctions(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 504 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp: In static member function ‘static std::vector CSensProblem::getPossibleVariables(SubTaskType)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.cpp:572:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 572 | switch (type) | ^ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sensitivities/CSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CEigen.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CEigen.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp: In member function ‘virtual bool CSensTask::process(const bool&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensTask.cpp:106:17: warning: unused variable ‘pProblem’ [-Wunused-variable] 106 | CSensProblem* pProblem = | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘void CMCAMethod::calculateUnscaledElasticities(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:226:32: warning: unused variable ‘TransientDependencies’ [-Wunused-variable] 226 | const CMathDependencyGraph & TransientDependencies = mpContainer->getTransientDependencies(); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:229:17: warning: unused variable ‘pParticleFluxObjectEnd’ [-Wunused-variable] 229 | CMathObject * pParticleFluxObjectEnd = pParticleFluxObject + numReacs; | ^~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:231:17: warning: unused variable ‘pSpeciesObjectEnd’ [-Wunused-variable] 231 | CMathObject * pSpeciesObjectEnd = pSpeciesObjectStart + numMetabs; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::calculateUnscaledConcentrationCC()’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:330:9: warning: unused variable ‘N’ [-Wunused-variable] 330 | C_INT N = (C_INT) aux2.numRows(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp: In member function ‘bool CMCAMethod::scaleMCA(const bool&, double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.cpp:394:10: warning: unused variable ‘numReacs’ [-Wunused-variable] 394 | size_t numReacs = mpContainer->getParticleFluxes().size(); | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAProblem.cpp:103:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 103 | pSubTask = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CMCATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CNewtonMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:235: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:54:1: warning: when initialized here [-Wreorder] 54 | CNewtonMethod::CNewtonMethod(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h: In constructor ‘CNewtonMethod::CNewtonMethod(const CNewtonMethod&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:92:13: warning: ‘CNewtonMethod::mTargetRate’ will be initialized after [-Wreorder] 92 | C_FLOAT64 mTargetRate; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.h:91:13: warning: ‘double CNewtonMethod::mTargetDistance’ [-Wreorder] 91 | C_FLOAT64 mTargetDistance; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CNewtonMethod::CNewtonMethod(const CNewtonMethod & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘std::string CNewtonMethod::targetValueToString() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 685 | switch (mTargetCriterion) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:905:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: 905 | dynamic_cast< CTrajectoryTask * >(&pDataModel->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:685:10: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp: In member function ‘virtual bool CNewtonMethod::initialize(const CSteadyStateProblem*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CNewtonMethod.cpp:858:23: warning: variable ‘pTrajectoryMethod’ set but not used [-Wunused-but-set-variable] 858 | CTrajectoryMethod * pTrajectoryMethod = NULL; | ^~~~~~~~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/steadystate/CSteadyStateTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp: In member function ‘virtual void CTimeSensLsodaMethod::start()’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensLsodaMethod.cpp:565:31: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 565 | for (i = mSystemSize + 1; i < mData.dim; ++i) | ~~^~~~~~~~~~~ [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp [ 22%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/timesens/CTimeSensTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:65: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.cpp:153:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 153 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp: In member function ‘void CHybridMethod::calculateDerivative(CVectorCore&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.cpp:330:11: warning: unused variable ‘bal’ [-Wunused-variable] 330 | C_INT32 bal = 0; | ^~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridMethodODE45.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:83:1: warning: when initialized here [-Wreorder] 83 | CHybridMethodODE45::CHybridMethodODE45(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h: In constructor ‘CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:361:26: warning: ‘CHybridMethodODE45::mSpeciesRateUpdateSequence’ will be initialized after [-Wreorder] 361 | CCore::CUpdateSequence mSpeciesRateUpdateSequence; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:330:31: warning: ‘CRungeKutta::RKMethodStatus CHybridMethodODE45::mRKMethodStatus’ [-Wreorder] 330 | CRungeKutta::RKMethodStatus mRKMethodStatus; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.cpp:141:1: warning: when initialized here [-Wreorder] 141 | CHybridMethodODE45::CHybridMethodODE45(const CHybridMethodODE45 & src, | ^~~~~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionLSODAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionLSODAMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CHybridNextReactionRKMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:64, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethod.h:56: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp: In member function ‘virtual void CHybridNextReactionRKMethod::integrateDeterministicPart(double)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridNextReactionRKMethod.cpp:93:22: warning: unused variable ‘react’ [-Wunused-variable] 93 | CHybridStochFlag * react = NULL; | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CLsodaMethod2.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:28:1: warning: when initialized here [-Wreorder] 28 | CLsodaMethod2::CLsodaMethod2(const CDataContainer * pParent, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h: In constructor ‘CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:247:9: warning: ‘CLsodaMethod2::mNumRoots’ will be initialized after [-Wreorder] 247 | C_INT mNumRoots; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.h:187:13: warning: ‘double CLsodaMethod2::mTime’ [-Wreorder] 187 | C_FLOAT64 mTime; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:61:1: warning: when initialized here [-Wreorder] 61 | CLsodaMethod2::CLsodaMethod2(const CLsodaMethod2 & src, | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp: In member function ‘virtual CTrajectoryMethod::Status CLsodaMethod2::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod2.cpp:150:13: warning: unused variable ‘StartTime’ [-Wunused-variable] 150 | C_FLOAT64 StartTime = mTime; | ^~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRadau5Method.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRootFinder.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRootFinder.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:8: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRadau5Method.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CRungeKutta.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::doOneStep()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:431:10: warning: unused variable ‘s’ [-Wunused-variable] 431 | size_t s = mStage - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::setInitialStepSize()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:710:13: warning: unused variable ‘absT’ [-Wunused-variable] 710 | C_FLOAT64 absT = fabs(mTLeft); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp: In member function ‘void CRungeKutta::checkRoots()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:802:15: warning: unused variable ‘pLeftRoots’ [-Wunused-variable] 802 | C_FLOAT64 * pLeftRoots = mRootValuesLeft; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CRungeKutta.cpp:805:15: warning: unused variable ‘pRightRoots’ [-Wunused-variable] 805 | C_FLOAT64 * pRightRoots = mRootValueRight; | ^~~~~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochDirectMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochDirectMethod.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 23%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochNextReactionMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CStochasticRungeKuttaRI5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochNextReactionMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CStochasticRungeKuttaRI5.h:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTauLeapMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp: In member function ‘bool CTauLeapMethod::updateSystem()’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.cpp:365:21: warning: unused variable ‘pKEnd’ [-Wunused-variable] 365 | const C_FLOAT64 * pKEnd = pK + mNumReactions; | ^~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTimeSeries.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajAdaptiveSA.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp: In member function ‘virtual bool CTimeSeries::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.cpp:181:14: warning: enumeration value ‘Undefined’ not handled in switch [-Wswitch] 181 | switch (pObject->getSimulationType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer*, const CTaskEnum::Method&, const CTaskEnum::Task&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CDataContainer * pParent, | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h: In constructor ‘CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:204:10: warning: ‘CTrajAdaptiveSA::mNumReactionSpecies’ will be initialized after [-Wreorder] 204 | size_t mNumReactionSpecies; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.h:189:20: warning: ‘unsigned int CTrajAdaptiveSA::mMaxSteps’ [-Wreorder] 189 | unsigned C_INT32 mMaxSteps; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajAdaptiveSA.cpp:70:1: warning: when initialized here [-Wreorder] 70 | CTrajAdaptiveSA::CTrajAdaptiveSA(const CTrajAdaptiveSA & src, | ^~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryMethodDsaLsodar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CHybridMethodODE45.h:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTauLeapMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CLsodaMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:48:1: warning: when initialized here [-Wreorder] 48 | CTrajectoryProblem::CTrajectoryProblem(const CTaskEnum::Task & type, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:71:1: warning: when initialized here [-Wreorder] 71 | CTrajectoryProblem::CTrajectoryProblem(const CDataContainer * pParent): | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h: In constructor ‘CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:209:10: warning: ‘CTrajectoryProblem::mpAutomaticStepSize’ will be initialized after [-Wreorder] 209 | bool * mpAutomaticStepSize; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.h:204:15: warning: ‘double* CTrajectoryProblem::mpDuration’ [-Wreorder] 204 | C_FLOAT64 * mpDuration; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryProblem.cpp:94:1: warning: when initialized here [-Wreorder] 94 | CTrajectoryProblem::CTrajectoryProblem(const CTrajectoryProblem & src, | ^~~~~~~~~~~~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/trajectory/CTrajectoryTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethod.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.cpp:193:84: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 193 | mpSteadyState = dynamic_cast(&pDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/locale:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:60: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.cpp:611:104: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 611 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterBM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterBM.cpp:73:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 73 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterC.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tss/CODEExporterXPPAUT.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterC.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporter.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/tss/CODEExporterXPPAUT.cpp:71:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 71 | dynamic_cast(&const_cast(pDataModel)->getTaskList()->operator[]("Time-Course")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CCSPMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp: In member function ‘int CCSPMethod::isBlockDiagonal(int, int, const CMatrix&, const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:15: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:21: warning: variable ‘jmax’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:27: warning: variable ‘imaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CCSPMethod.cpp:782:34: warning: variable ‘jmaxl’ set but not used [-Wunused-but-set-variable] 782 | C_INT i, j, imax, jmax, imaxl, jmaxl; | ^~~~~ [ 24%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘virtual void CILDMMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:108:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 108 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:223:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 223 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp: In member function ‘void CILDMMethod::deuflhard(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:886:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 886 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMMethod.cpp:1029:13: warning: variable ‘max1’ set but not used [-Wunused-but-set-variable] 1029 | C_FLOAT64 max1; | ^~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CILDMModifiedMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘virtual void CILDMModifiedMethod::step(const double&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:117:9: warning: variable ‘flag_jacob’ set but not used [-Wunused-but-set-variable] 117 | C_INT flag_jacob; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:179:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 179 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:224:9: warning: variable ‘flag_schur’ set but not used [-Wunused-but-set-variable] 224 | C_INT flag_schur; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::deuflhard_metab(int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:508:9: warning: variable ‘flag_deufl’ set but not used [-Wunused-but-set-variable] 508 | C_INT flag_deufl; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_new(int*, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:620:25: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 620 | C_INT nrhs, ok, fast, flag_newton; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp: In member function ‘void CILDMModifiedMethod::newton_for_timestep(int, double&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CILDMModifiedMethod.cpp:848:27: warning: variable ‘flag_newton’ set but not used [-Wunused-but-set-variable] 848 | C_INT i, iter, itermax, flag_newton; | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_mod_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:407:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 407 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:465:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 465 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::mat_anal_fast_space_thomas(int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:523:9: warning: variable ‘fast’ set but not used [-Wunused-but-set-variable] 523 | C_INT fast; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp: In member function ‘void CTSSAMethod::sylvester(int, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.cpp:1645:9: warning: variable ‘flag_sylvester’ set but not used [-Wunused-but-set-variable] 1645 | C_INT flag_sylvester; | ^~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSAProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/tssanalysis/CTSSATask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CDataValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator==(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:322:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 322 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘bool CDataValue::operator!=(const CDataValue&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:362:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 362 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::allocateData(const Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:416:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 416 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::deleteData()’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:466:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 466 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In member function ‘void CDataValue::assignData(const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:510:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 510 | switch (rhs.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:626:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 626 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp: In function ‘std::istream& operator>>(std::istream&, CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.cpp:707:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 707 | switch (i.mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoObjectInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoObjectInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘void CUndoData::CChangeSet::add(const CUndoData::ChangeInfo&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:67:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 67 | switch (Info.type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CUndoObjectInterface*, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:207:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 207 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In constructor ‘CUndoData::CUndoData(const Type&, const CData&, const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:252:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 252 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:320:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 320 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::addProperty(const std::string&, const CDataValue&, const CDataValue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:354:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 354 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::isSetProperty(const std::string&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:422:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 422 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::apply(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:555:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 555 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::undo(const CDataModel&, CChangeSet&, const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:577:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 577 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectDisplayName() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:649:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 649 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:666:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 666 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘std::string CUndoData::getObjectType() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:696:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 696 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘bool CUndoData::operator<(const CUndoData&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:715:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 715 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:753:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 753 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp: In member function ‘const CData& CUndoData::getData(const bool&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoData.cpp:977:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 977 | switch (mType) | ^ [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/undo/CUndoStack.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CUndoStack.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_yacc.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_yacc.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser_lex.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser_lex.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBaseUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBaseUnit.cpp [ 25%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CBrent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CBrent.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiException.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiException.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMessage.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiMethod.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiParameterGroup.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual CData CCopasiParameter::toData() const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:105:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 105 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘virtual void CCopasiParameter::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:185:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 185 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In function ‘std::ostream& operator<<(std::ostream&, const CCopasiParameter&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:419:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 419 | switch (o.mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::createValue()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:534:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 534 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp: In member function ‘virtual void CCopasiParameterGroup::createUndoData(CUndoData&, const CUndoData::Type&, const CData&, const CCore::Framework&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.cpp:236:22: warning: unused variable ‘pParameter’ [-Wunused-variable] 236 | CCopasiParameter * pParameter; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In member function ‘void CCopasiParameter::assignValidValues(const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:596:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 596 | switch (mType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValue(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:661:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 661 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::assignValue(const Type&, void*&, const void*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:713:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 713 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp: In static member function ‘static void CCopasiParameter::allocateValidValues(const Type&, void*&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.cpp:807:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 807 | switch (type) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiProblem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h: In constructor ‘CCopasiTask::CCopasiTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:522:24: warning: ‘CCopasiTask::mInitialState’ will be initialized after [-Wreorder] 522 | CVector< C_FLOAT64 > mInitialState; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.h:516:20: warning: ‘CMathContainer* CCopasiTask::mpContainer’ [-Wreorder] 516 | CMathContainer * mpContainer; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:232:1: warning: when initialized here [-Wreorder] 232 | CCopasiTask::CCopasiTask() | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp: In member function ‘virtual void CCopasiTask::separate(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTask.cpp:654:12: warning: enumeration value ‘MONITORING’ not handled in switch [-Wswitch] 654 | switch (activity) | ^ [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CCopasiTaskStatus.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTaskStatus.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDependencyGraph.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDependencyGraph.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CDirEntry.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CDirEntry.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CExpressionGenerator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp: In static member function ‘static std::string CExpressionGenerator::generate(Operation, const std::vector&, bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for (int i = 1; i < objects.size(); ++i) | ~~^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CFlags.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CCore.h:83, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CObjectInterface.h:13, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h: In instantiation of ‘std::vector CEnumAnnotation::annotations() const [with Type = std::__cxx11::basic_string; Enum = CExpressionGenerator::Operation]’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:71:36: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: 71 | return OperationNames.annotations(); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CExpressionGenerator.cpp:184:21: warning: | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: warning: loop variable ‘a’ of type ‘const std::pair, CExpressionGenerator::Operation>&’ binds to a temporary constructed from type ‘const std::pair, CExpressionGenerator::Operation>’ [-Wrange-loop-construct] 114 | for (const std::pair< Type, Enum > & a : mMap) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CEnumAnnotation.h:114:42: note: use non-reference type ‘const std::pair, CExpressionGenerator::Operation>’ to make the copy explicit or ‘const std::pair, CExpressionGenerator::Operation>&’ to prevent copying [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CIndexedPriorityQueue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CIndexedPriorityQueue.cpp [ 26%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLeastSquareSolution.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLeastSquareSolution.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CLinkMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CMethodFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CParameterEstimationUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethodCoranaWalk.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/elementaryFluxModes/CBitPatternMethod.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::create(const CTaskEnum::Task&, const CTaskEnum::Method&, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 80 | switch (methodType) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:80:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp: In static member function ‘static CCopasiMethod* CMethodFactory::copy(const CCopasiMethod*, const CDataContainer*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘RandomSearchMaster’ not handled in switch [-Wswitch] 288 | switch (pSrc->getSubType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘HybridGASA’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘LSODA2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘analyticsMethod’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CMethodFactory.cpp:288:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProblemFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:193:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 193 | for (size_t i = 0; i < taskList.size(); i++) /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp: In static member function ‘static FittingItem* ResultParser::parseItem(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:481:16: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 481 | if (firstLeq == -1) | ~~~~~~~~~^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CParameterEstimationUtils.cpp:488:14: warning: comparison of integer expressions of different signedness: ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 488 | if (square == -1) | ~~~~~~~^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateProblem.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProblemFactory.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CProcessReport.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CReadConfig.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CReadConfig.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSlider.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CSparseMatrix.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/algorithm:60, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTableCell.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTableCell.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskEnum.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskEnum.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CTaskFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CTaskFactory.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitComponent.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitComponent.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ [ 27%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitDefinitionDB.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp: In member function ‘virtual bool CUnitDefinitionDB::add(const CUnitDefinition&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.cpp:43:21: warning: variable ‘pCopy’ set but not used [-Wunused-but-set-variable] 43 | CUnitDefinition * pCopy = NULL; | ^~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h: In constructor ‘CUnitParserBase::CUnitParserBase()’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:81:20: warning: ‘CUnitParserBase::mPosition’ will be initialized after [-Wreorder] 81 | unsigned C_INT32 mPosition; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.h:80:10: warning: ‘CUnit* CUnitParserBase::mpUnit’ [-Wreorder] 80 | CUnit *mpUnit; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitParser.cpp:20:1: warning: when initialized here [-Wreorder] 20 | CUnitParserBase::CUnitParserBase(): | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CUnitValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidatedUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidatedUnit.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CValidity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CVersion.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CVersion.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::add(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:277:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 277 | switch (issue.getSeverity()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp: In member function ‘void CValidity::remove(const CIssue&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CValidity.cpp:316:10: warning: enumeration value ‘Success’ not handled in switch [-Wswitch] 316 | switch (issue.getSeverity()) | ^ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CluX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CluX.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/Cmd5.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/Cmd5.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/CopasiTime.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CopasiTime.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/dgemm.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/dgemm.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/utilities/utility.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXML.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp: In function ‘ISODateTime[abi:cxx11](tm*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:24: warning: ‘%.02d’ directive writing between 2 and 11 bytes into a region of size between 8 and 18 [-Wformat-overflow=] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:20: note: directive argument in the range [-2147483647, 2147483647] 50 | sprintf(str, "%d-%.02d-%.02dT%.02d:%.02d:%.02d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:980, from /usr/include/c++/14/cstdio:42, from /usr/include/c++/14/ext/string_conversions.h:45, from /usr/include/c++/14/bits/basic_string.h:4154, from /usr/include/c++/14/string:54, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:28: In function ‘sprintf’, inlined from ‘ISODateTime[abi:cxx11](tm*)’ at /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/utility.cpp:50:14: /usr/include/bits/stdio2.h:30:34: note: ‘__sprintf_chk’ output between 17 and 72 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:67: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:69: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:304:7: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 304 | pdelete(mpTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp: In member function ‘bool CCopasiXML::saveModel()’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXML.cpp:1042:28: warning: unused variable ‘pDataModel’ [-Wunused-variable] 1042 | CDataModel * pDataModel = Assignments.getObjectDataModel(); | ^~~~~~~~~~ [ 28%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CCopasiXMLInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CExpat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CExpat.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/CFixLocalReactionParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CFixLocalReactionParameters.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AdditionalGraphicalObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AdditionalGraphicalObjectHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/AssignmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/AssignmentHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/BoundingBoxHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/BoundingBoxHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/COPASIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:79:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 79 | mpData->pTaskList->clear(); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/COPASIHandler.cpp:181:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 181 | mpData->pFunctionList->getIndex("Objective Function") != C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLHandlerFactory.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp: In member function ‘CXMLHandler* CXMLHandlerFactory::createHandler(const CXMLHandler::Type&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘AFTER’ not handled in switch [-Wswitch] 137 | switch (type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint1’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘BasePoint2’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Body’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘CurveSegment’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘DelayExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘End’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Expression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Footer’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Header’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘InitialExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘NoiseExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Position’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘PriorityExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Problem’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Start’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Text’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘TriggerExpression’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLHandlerFactory.cpp:137:10: warning: enumeration value ‘Unit’ not handled in switch [-Wswitch] [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CXMLParserData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParserData.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CallParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CallParameterHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ChannelSpecHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ChannelSpecHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CharacterDataHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CharacterDataHandler.cpp [ 29%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ColorDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ColorDefinitionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CommentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CommentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CompartmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ConstantHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CompartmentHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ConstantHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CubicBezierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CubicBezierHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/CurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CurveHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/DimensionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/DimensionsHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EllipseHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLEllipse.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EllipseHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/EventHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/FunctionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/EventHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/FunctionHandler.cpp:96:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 96 | Index = mpData->pFunctionList->getIndex(Name); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GUIHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GUIHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GradientStopHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp [ 30%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/GroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GradientStopHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/GroupHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ImageHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ImageHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/InitialStateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/InitialStateHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/KineticLawHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LayoutHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/KineticLawHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LayoutHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineEndingHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LineSegmentHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineSegmentHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LineEndingHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/LinearGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfCurveSegmentsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfCurveSegmentsHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/LinearGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfGradientDefinitionsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfGradientDefinitionsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ListOfLayoutsHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ListOfLayoutsHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MathMLHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MathMLHandler.cpp [ 31%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MetaboliteReferenceGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteReferenceGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MetaboliteHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MethodHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MethodHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/MiriamAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/MiriamAnnotationHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterGroupHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelParameterSetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelParameterSetHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModelValueHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ModifierHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModelValueHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ModifierHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ObjectHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ObjectHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterDescriptionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterDescriptionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterGroupHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterGroupHandler.cpp [ 32%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ParameterTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ParameterTextHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotItemHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotItemHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PlotSpecificationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PointHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PointHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PlotSpecificationHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/PolygonHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ProductHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLPolygon.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/PolygonHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ProductHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RadialGradientHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RadialGradientHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionGlyphHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReactionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RectangleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReactionHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRectangle.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RectangleHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveElementHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveElementHandler.cpp [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderCurveHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderCurve.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderCurveHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 33%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderInformationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/RenderTextHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderInformationHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLText.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/RenderTextHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportSectionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportSectionHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/ReportTargetHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/ReportTargetHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SBMLMapHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SBMLMapHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SliderHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SourceParameterHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StateTemplateVariableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/StyleHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/SubstrateHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TableHandler.cpp [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TaskHandler.cpp:66:52: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 66 | mpData->pCurrentTask = CTaskFactory::create(Type, mpData->pTaskList); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 34%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/CCopasiXMLInterface.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/TextGlyphHandler.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UNKNOWNHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnsupportedAnnotationHandler.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/CXMLParser.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/xml/parser/UnitDefinitionHandler.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeFunction.h:49, from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/CSBMLExporter.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:410:75: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 410 | CScanTask* pTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Scan")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createScanTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:450:8: warning: unused variable ‘result’ [-Wunused-variable] 450 | bool result = exportNthScanItem(pProblem, numItems - 1, task); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In member function ‘std::string CSEDMLExporter::createSteadyStateTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:638:23: warning: unused variable ‘tProblem’ [-Wunused-variable] 638 | CTrajectoryProblem* tProblem = static_cast(pTask->getProblem()); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp: In static member function ‘static std::string CSEDMLExporter::getParameterValueAsString(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:49: warning: second operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/CSEDMLExporter.cpp:760:58: warning: third operand of conditional expression has no effect [-Wunused-value] 760 | str << pParameter->getValue< bool >() ? "true" : "false"; | ^~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/ostream:40, from /usr/include/c++/14/iostream:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:68: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:168:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 168 | if (pTaskList->getIndex("Time-Course") == C_INVALID_INDEX) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp: In member function ‘void SEDMLImporter::importOutputs()’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:465:18: warning: unused variable ‘logX’ [-Wunused-variable] 465 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:466:18: warning: unused variable ‘logY’ [-Wunused-variable] 466 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:499:18: warning: unused variable ‘logX’ [-Wunused-variable] 499 | bool logX = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:500:18: warning: unused variable ‘logY’ [-Wunused-variable] 500 | bool logY = false; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:424:46: warning: unused variable ‘copasiMap’ [-Wunused-variable] 424 | std::map< const CDataObject *, SBase * > & copasiMap = pModel->getObjectDataModel()->getCopasi2SBMLMap(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLImporter.cpp:426:29: warning: unused variable ‘pReports’ [-Wunused-variable] 426 | CReportDefinitionVector * pReports = mpDataModel->getReportDefinitionList(); | ^~~~~~~~ [ 35%] Building CXX object copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fstack-protector-all -MD -MT copasi/CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -MF CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o.d -o CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static const CDataObject* SEDMLUtils::resolveVariable(CModel*, const SedVariable*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:337:25: warning: unused variable ‘pReaction’ [-Wunused-variable] 337 | const CReaction * pReaction = dynamic_cast< const CReaction * >(obj); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp: In static member function ‘static int SEDMLUtils::getAlphaFromRgba(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:665:7: warning: unused variable ‘offset’ [-Wunused-variable] 665 | int offset = rgba[0] == '#' ? 1 : 0; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h: In constructor ‘VariableInfo::VariableInfo(const CDataObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:74:23: warning: ‘VariableInfo::mpObject’ will be initialized after [-Wreorder] 74 | const CDataObject * mpObject; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.h:72:8: warning: ‘bool VariableInfo::mIsValid’ [-Wreorder] 72 | bool mIsValid; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/sedml/SEDMLUtils.cpp:808:1: warning: when initialized here [-Wreorder] 808 | VariableInfo::VariableInfo(const CDataObject * pObject) | ^~~~~~~~~~~~ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-core /usr/bin/gmake -f copasi/CMakeFiles/libCOPASISE-static.dir/build.make copasi/CMakeFiles/libCOPASISE-static.dir/depend gmake[2]: 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"CMakeFiles/libCOPASISE-core.dir/xml/parser/SliderHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/SourceParameterHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/StateTemplateVariableHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/StyleHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/SubstrateHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/TableHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/TaskHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/TextGlyphHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/UNKNOWNHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/UnitDefinitionHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/xml/parser/UnsupportedAnnotationHandler.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/CSEDMLExporter.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLImporter.cpp.o" "CMakeFiles/libCOPASISE-core.dir/sedml/SEDMLUtils.cpp.o" /usr/bin/ranlib libCOPASISE.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Built target libCOPASISE-static /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/depend /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Swig Python source cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../swig/ -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../../ -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/builddir/build/BUILD/COPASI-Build-284 -c++ -python -DLIBSBML_CPP_NAMESPACE_USE= -DLIBSBML_CPP_NAMESPACE_BEGIN= -DLIBSBML_CPP_NAMESPACE_END= -DLIBSEDML_CPP_NAMESPACE_USE= -DLIBSEDML_CPP_NAMESPACE_BEGIN= -DLIBSEDML_CPP_NAMESPACE_END= -DLIBSEDML_CPP_NAMESPACE_QUALIFIER= -DLIBCOMBINE_CPP_NAMESPACE_USE= -DLIBCOMBINE_CPP_NAMESPACE_BEGIN= -DLIBCOMBINE_CPP_NAMESPACE_END= -DLIBCOMBINE_CPP_NAMESPACE_QUALIFIER= -features autodoc,1 -o /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/python.i gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 36%] Generating wizard/ui_wizard.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/ui_wizard.h /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.ui [ 36%] Generating MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQCreatorDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQMiriamWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQModifiedDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp_parameters [ 36%] Generating MIRIAMUI/moc_CQRDFTreeViewItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating MIRIAMUI/moc_CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp_parameters [ 37%] Generating MIRIAMUI/ui_CQMiriamWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQMiriamWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.ui [ 37%] Generating MIRIAMUI/ui_CQRDFTreeView.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/ui_CQRDFTreeView.h /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.ui [ 37%] Generating UI/moc_AboutDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp_parameters [ 37%] Generating UI/moc_CColorScale.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.h:0: Note: No relevant classes found. No output generated. [ 37%] Generating UI/moc_CCopasiPlot2YSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiPlotSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp_parameters [ 37%] Generating UI/moc_CCopasiSelectionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CLNAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp_parameters [ 37%] Generating UI/moc_CMCAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp_parameters [ 37%] Generating UI/moc_CProgressBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp_parameters [ 38%] Generating UI/moc_CQAnalyticsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp_parameters [ 38%] Generating UI/moc_CQArrayAnnotationsWidgetDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp_parameters [ 38%] Generating UI/moc_CQBaseDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBaseTreeDataModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPane.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp_parameters [ 38%] Generating UI/moc_CQBrowserPaneDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp_parameters [ 38%] Generating UI/moc_CQCheckModelWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp_parameters [ 38%] Generating UI/moc_CQComboDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp_parameters [ 38%] Generating UI/moc_CQCompartment.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentCopyOptions.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp_parameters [ 38%] Generating UI/moc_CQCompartmentsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp_parameters [ 39%] Generating UI/moc_CQCopasiApplication.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp_parameters [ 39%] Generating UI/moc_CQCrossSectionTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp_parameters [ 39%] Generating UI/moc_CQDateTimeEditDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp_parameters [ 39%] Generating UI/moc_CQDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp_parameters [ 39%] Generating UI/moc_CQDependencyDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp_parameters [ 39%] Generating UI/moc_CQDependencyWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp_parameters [ 39%] Generating UI/moc_CQDifferentialEquations.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp_parameters [ 39%] Generating UI/moc_CQEFMListWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMNetReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp_parameters [ 39%] Generating UI/moc_CQEFMSpeciesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp_parameters [ 39%] Generating UI/moc_CQEFMWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp_parameters [ 39%] Generating UI/moc_CQEventDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp_parameters [ 40%] Generating UI/moc_CQEventWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp_parameters [ 40%] Generating UI/moc_CQEventsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpandModelData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp_parameters [ 40%] Generating UI/moc_CQExperimentSelection.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp_parameters [ 40%] Generating UI/moc_CQExpressionMmlStackedWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp_parameters [ 40%] Generating UI/moc_CQExpressionWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingItemWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp_parameters [ 40%] Generating UI/moc_CQFittingResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp_parameters [ 40%] Generating UI/moc_CQFittingResultTab1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp_parameters [ 40%] Generating UI/moc_CQFittingWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp_parameters [ 40%] Generating UI/moc_CQFluxModeDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp_parameters [ 40%] Generating UI/moc_CQFunctionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp_parameters [ 41%] Generating UI/moc_CQFunctionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp_parameters [ 41%] Generating UI/moc_CQGlobalQuantityDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp_parameters [ 41%] Generating UI/moc_CQLNAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp_parameters [ 41%] Generating UI/moc_CQLayoutsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp_parameters [ 41%] Generating UI/moc_CQLyapWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp_parameters [ 41%] Generating UI/moc_CQMCAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp_parameters [ 41%] Generating UI/moc_CQMathMatrixWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp_parameters [ 41%] Generating UI/moc_CQMatrixDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp_parameters [ 41%] Generating UI/moc_CQMergingData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp_parameters [ 41%] Generating UI/moc_CQMessageBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp_parameters [ 41%] Generating UI/moc_CQMmlScrollView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp_parameters [ 42%] Generating UI/moc_CQModelValue.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp_parameters [ 42%] Generating UI/moc_CQModelWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp_parameters [ 42%] Generating UI/moc_CQMoietiesTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQMultipleSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNameSelectionDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp_parameters [ 42%] Generating UI/moc_CQNotes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp_parameters [ 42%] Generating UI/moc_CQOptPopulation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp_parameters [ 42%] Generating UI/moc_CQOptimizationWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp_parameters [ 42%] Generating UI/moc_CQOscillationTaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp_parameters [ 42%] Generating UI/moc_CQParameterEstimationResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp_parameters [ 42%] Generating UI/moc_CQParameterGroupDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterGroupView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterOverviewWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp_parameters [ 43%] Generating UI/moc_CQParameterResultItemModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.h:0: Note: No relevant classes found. No output generated. [ 43%] Generating UI/moc_CQParameterSetsDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp_parameters [ 43%] Generating UI/moc_CQParameterSetsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPlotDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp_parameters [ 43%] Generating UI/moc_CQPlotsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp_parameters [ 43%] Generating UI/moc_CQPreferenceDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp_parameters [ 43%] Generating UI/moc_CQProgressItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemBar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp_parameters [ 43%] Generating UI/moc_CQProgressItemText.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp_parameters [ 44%] Generating UI/moc_CQPushButtonDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp_parameters [ 44%] Generating UI/moc_CQReactionDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp_parameters [ 44%] Generating UI/moc_CQReactionsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp_parameters [ 44%] Generating UI/moc_CQReportDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinition.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp_parameters [ 44%] Generating UI/moc_CQReportDefinitionSelect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp_parameters [ 44%] Generating UI/moc_CQReportListItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQReportsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp_parameters [ 44%] Generating UI/moc_CQSBMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.h:0: Note: No relevant classes found. No output generated. [ 44%] Generating UI/moc_CQSEDMLImportDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp_parameters [ 44%] Generating UI/moc_CQScanWidgetParameterSet.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp_parameters [ 44%] Generating UI/moc_CQScrolledDependenciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp_parameters [ 44%] Generating UI/moc_CQSensResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQSimpleSelectionTree.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp_parameters [ 45%] Generating UI/moc_CQSortFilterProxyModel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.h:0: Note: No relevant classes found. No output generated. [ 45%] Generating UI/moc_CQSpecieDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp_parameters [ 45%] Generating UI/moc_CQSpeciesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp_parameters [ 45%] Generating UI/moc_CQSpinBoxDelegate.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp_parameters [ 45%] Generating UI/moc_CQSplashWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp_parameters [ 45%] Generating UI/moc_CQStartValueReset.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp_parameters [ 45%] Generating UI/moc_CQSteadyStateResult.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp_parameters [ 45%] Generating UI/moc_CQTSSAResultSubWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:337: Warning 383: operator++ ignored [ 45%] Generating UI/moc_CQTSSAResultWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSATimeScaleWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp_parameters [ 45%] Generating UI/moc_CQTSSAWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp_parameters [ 46%] Generating UI/moc_CQTabWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp_parameters [ 46%] Generating UI/moc_CQTableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp_parameters [ 46%] Generating UI/moc_CQTableWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.h:0: Note: No relevant classes found. No output generated. [ 46%] Generating UI/moc_CQTaskBtnWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskHeaderWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskMethodWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp_parameters [ 46%] Generating UI/moc_CQTaskThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp_parameters [ 46%] Generating UI/moc_CQTextDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp_parameters [ 46%] Generating UI/moc_CQThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp_parameters [ 46%] Generating UI/moc_CQTimeSensWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp_parameters [ 46%] Generating UI/moc_CQTimeSeriesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp_parameters [ 46%] Generating UI/moc_CQTrajectoryWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp_parameters [ 46%] Generating UI/moc_CQUndoTester.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp_parameters [ 47%] Generating UI/moc_CQUnitDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp_parameters [ 47%] Generating UI/moc_CQUnitDetail.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp_parameters [ 47%] Generating UI/moc_CQUnitsWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp_parameters [ 47%] Generating UI/moc_CQUpdateAvogadro.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp_parameters [ 47%] Generating UI/moc_CQUpdatesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp_parameters [ 47%] Generating UI/moc_CQValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CQValidatorUnit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp_parameters [ 47%] Generating UI/moc_CScanContainerWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp_parameters [ 47%] Generating UI/moc_CScanItemData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:0: Note: No relevant classes found. No output generated. [ 47%] Generating UI/moc_CScanWidgetRandom.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetRepeat.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetScan.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp_parameters [ 47%] Generating UI/moc_CScanWidgetTask.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp_parameters [ 48%] Generating UI/moc_CUpDownSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp_parameters [ 48%] Generating UI/moc_CWindowInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp_parameters [ 48%] Generating UI/moc_ChemEqValidator.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiFileDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiGuiTypes.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_CopasiSlider.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp_parameters [ 48%] Generating UI/moc_DataModelGUI.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp_parameters [ 48%] Generating UI/moc_DefaultplotDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp_parameters [ 48%] Generating UI/moc_FunctionWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp_parameters [ 48%] Generating UI/moc_MyLineEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp_parameters [ 48%] Generating UI/moc_ObjectBrowserItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.h:0: Note: No relevant classes found. No output generated. [ 48%] Generating UI/moc_ObjectBrowserWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp_parameters [ 49%] Generating UI/moc_ReactionsWidget1.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp_parameters [ 49%] Generating UI/moc_ScanWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp_parameters [ 49%] Generating UI/moc_SensWidgetComboBox.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp_parameters [ 49%] Generating UI/moc_SensitivitiesWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp_parameters [ 49%] Generating UI/moc_SliderDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp_parameters [ 49%] Generating UI/moc_SliderSettingsDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp_parameters [ 49%] Generating UI/moc_StateSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp_parameters [ 49%] Generating UI/moc_SteadyStateWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp_parameters [ 49%] Generating UI/moc_TaskWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp_parameters [ 49%] Generating UI/moc_copasiWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp_parameters [ 49%] Generating UI/moc_copasiui3window.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp_parameters [ 49%] Generating UI/moc_listviews.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp_parameters [ 49%] Generating UI/moc_objectdebug.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp_parameters [ 49%] Generating UI/moc_parametertable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp_parameters [ 50%] Generating UI/moc_qtUtilities.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/UI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:0: Note: No relevant classes found. No output generated. [ 50%] Generating UI/ui_CEntityProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CEntityProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CEntityProvenanceDialog.ui [ 50%] Generating UI/ui_CLNAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.ui [ 50%] Generating UI/ui_CMCAResultSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.ui [ 50%] Generating UI/ui_CProvenanceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CProvenanceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProvenanceDialog.ui [ 50%] Generating UI/ui_CQAnalyticsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQAnalyticsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.ui [ 50%] Generating UI/ui_CQArrayAnnotationsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQArrayAnnotationsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.ui [ 50%] Generating UI/ui_CQBrowserPane.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQBrowserPane.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.ui [ 50%] Generating UI/ui_CQCheckModelWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCheckModelWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.ui [ 50%] Generating UI/ui_CQCompartment.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.ui [ 50%] Generating UI/ui_CQCompartmentCopyOptions.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentCopyOptions.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.ui [ 51%] Generating UI/ui_CQCompartmentsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartmentsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.ui [ 51%] Generating UI/ui_CQCrossSectionTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCrossSectionTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.ui [ 51%] Generating UI/ui_CQDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.ui [ 51%] Generating UI/ui_CQDependencyDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.ui [ 51%] Generating UI/ui_CQDependencyWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDependencyWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.ui [ 51%] Generating UI/ui_CQDifferentialEquations.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQDifferentialEquations.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.ui [ 51%] Generating UI/ui_CQEFMListWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMListWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.ui [ 51%] Generating UI/ui_CQEFMResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.ui [ 51%] Generating UI/ui_CQEFMWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEFMWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.ui [ 51%] Generating UI/ui_CQEventWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.ui [ 51%] Generating UI/ui_CQEventsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.ui [ 51%] Generating UI/ui_CQExpandModelData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpandModelData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.ui [ 51%] Generating UI/ui_CQExperimentData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.ui [ 51%] Generating UI/ui_CQExperimentSelection.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExperimentSelection.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.ui [ 52%] Generating UI/ui_CQExpressionMmlStackedWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.ui [ 52%] Generating UI/ui_CQFittingItemWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingItemWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.ui [ 52%] Generating UI/ui_CQFittingResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.ui [ 52%] Generating UI/ui_CQFittingResultTab1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResultTab1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.ui [ 52%] Generating UI/ui_CQFittingWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.ui [ 52%] Generating UI/ui_CQFunctionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFunctionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.ui [ 52%] Generating UI/ui_CQGlobalQuantitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQGlobalQuantitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.ui [ 52%] Generating UI/ui_CQLNAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLNAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.ui [ 52%] Generating UI/ui_CQLayoutsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLayoutsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.ui [ 52%] Generating UI/ui_CQLyapResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.ui [ 52%] Generating UI/ui_CQLyapWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQLyapWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.ui [ 52%] Generating UI/ui_CQMCAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMCAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.ui [ 52%] Generating UI/ui_CQMathMatrixWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.ui [ 53%] Generating UI/ui_CQMatrixDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMatrixDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.ui [ 53%] Generating UI/ui_CQMergingData.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMergingData.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.ui [ 53%] Generating UI/ui_CQMessageBox.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMessageBox.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.ui [ 53%] Generating UI/ui_CQModelValue.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.ui [ 53%] Generating UI/ui_CQModelWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.ui [ 53%] Generating UI/ui_CQMoietiesTaskResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.ui [ 53%] Generating UI/ui_CQMoietiesTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.ui [ 53%] Generating UI/ui_CQMultipleSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMultipleSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.ui [ 53%] Generating UI/ui_CQNameSelectionDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNameSelectionDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.ui [ 53%] Generating UI/ui_CQNotes.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQNotes.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.ui [ 53%] Generating UI/ui_CQOptimizationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.ui [ 53%] Generating UI/ui_CQOptimizationWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.ui [ 53%] Generating UI/ui_CQOscillationTaskWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOscillationTaskWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.ui [ 54%] Generating UI/ui_CQParameterEstimationResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterEstimationResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.ui [ 54%] Generating UI/ui_CQParameterOverviewWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterOverviewWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.ui [ 54%] Generating UI/ui_CQParameterSetWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetWidget.ui [ 54%] Generating UI/ui_CQParameterSetsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParameterSetsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.ui [ 54%] Generating UI/ui_CQParametersWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQParametersWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParametersWidget.ui [ 54%] Generating UI/ui_CQPlotsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPlotsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.ui [ 54%] Generating UI/ui_CQPreferenceDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQPreferenceDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.ui [ 54%] Generating UI/ui_CQProgressDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.ui [ 54%] Generating UI/ui_CQProgressItem.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItem.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.ui [ 54%] Generating UI/ui_CQProgressItemBar.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemBar.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.ui [ 54%] Generating UI/ui_CQProgressItemText.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQProgressItemText.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.ui [ 54%] Generating UI/ui_CQReactionsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReactionsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.ui [ 54%] Generating UI/ui_CQReportDefinition.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinition.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.ui [ 54%] Generating UI/ui_CQReportDefinitionSelect.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportDefinitionSelect.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.ui [ 55%] Generating UI/ui_CQReportsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQReportsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.ui [ 55%] Generating UI/ui_CQSEDMLImportDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.ui [ 55%] Generating UI/ui_CQScanWidgetParameterSet.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScanWidgetParameterSet.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.ui [ 55%] Generating UI/ui_CQScrolledDependenciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQScrolledDependenciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.ui [ 55%] Generating UI/ui_CQSensResultWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.ui [ 55%] Generating UI/ui_CQSpeciesDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.ui [ 55%] Generating UI/ui_CQSpeciesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.ui [ 55%] Generating UI/ui_CQSplashWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSplashWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.ui [ 55%] Generating UI/ui_CQStartValueReset.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQStartValueReset.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.ui [ 55%] Generating UI/ui_CQSteadyStateResult.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.ui [ 55%] Generating UI/ui_CQTSSAResultSubWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.ui [ 55%] Generating UI/ui_CQTSSAWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.ui [ 55%] Generating UI/ui_CQTabWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTabWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.ui [ 56%] Generating UI/ui_CQTaskBtnWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskBtnWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.ui [ 56%] Generating UI/ui_CQTaskHeaderWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskHeaderWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.ui [ 56%] Generating UI/ui_CQTaskMethodWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTaskMethodWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.ui [ 56%] Generating UI/ui_CQTextDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTextDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.ui [ 56%] Generating UI/ui_CQTimeSensWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSensWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.ui [ 56%] Generating UI/ui_CQTimeSeriesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTimeSeriesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.ui [ 56%] Generating UI/ui_CQTrajectoryWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTrajectoryWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.ui [ 56%] Generating UI/ui_CQUndoHistoryDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUndoHistoryDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoHistoryDialog.ui [ 56%] Generating UI/ui_CQUnitDetail.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitDetail.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.ui [ 56%] Generating UI/ui_CQUnitsWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUnitsWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.ui [ 56%] Generating UI/ui_CQUpdateAvogadro.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQUpdateAvogadro.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.ui [ 56%] Generating UI/ui_CScanWidgetRandom.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRandom.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.ui [ 56%] Generating UI/ui_CScanWidgetRepeat.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetRepeat.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.ui [ 56%] Generating UI/ui_CScanWidgetScan.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetScan.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.ui [ 57%] Generating UI/ui_CScanWidgetTask.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CScanWidgetTask.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.ui [ 57%] Generating UI/ui_CUpDownSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CUpDownSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.ui [ 57%] Generating UI/ui_DefaultplotDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_DefaultplotDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.ui [ 57%] Generating UI/ui_FunctionWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.ui [ 57%] Generating UI/ui_ReactionsWidget1.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.ui [ 57%] Generating UI/ui_SensitivitiesWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SensitivitiesWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.ui [ 57%] Generating UI/ui_SliderDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.ui [ 57%] Generating UI/ui_SliderSettingsDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SliderSettingsDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.ui [ 57%] Generating UI/ui_StateSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.ui [ 57%] Generating UI/ui_SteadyStateWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_SteadyStateWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.ui [ 57%] Generating UI/ui_objectdebug.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_objectdebug.h /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.ui [ 57%] Generating barChart/moc_CQ3DBarsModifier.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/barChart && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp_parameters [ 57%] Generating layoutUI/moc_BezierCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CArrow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CCompartmentGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CDataEntity.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.h:0: Note: No relevant classes found. No output generated. [ 57%] Generating layoutUI/moc_CGraphNode.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CLabel.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CQAutolayoutWizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp_parameters [ 58%] Generating layoutUI/moc_CQCurrentValueTable.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp_parameters [ 58%] Generating layoutUI/moc_CQLayoutThread.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp_parameters [ 58%] Generating layoutUI/moc_CQPlayerControlWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp_parameters [ 58%] Generating layoutUI/moc_CQSpringLayoutParameterWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp_parameters [ 58%] Generating layoutUI/moc_CSimSummaryInfo.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating layoutUI/moc_CVisParameters.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_BandedGraphWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp_parameters [ 58%] Generating plotUI/moc_C2DCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_C2DPlotCurve.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CBandedGraphData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CHistoCurveData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CLinearColorMap.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_COutputHandlerPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotInterface.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CPlotSpectogram.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.h:0: Note: No relevant classes found. No output generated. [ 58%] Generating plotUI/moc_CQAdvancedPlotSettings.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp_parameters [ 58%] Generating plotUI/moc_CQCustomPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp_parameters [ 58%] Generating plotUI/moc_CQDataVizPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp_parameters [ 59%] Generating plotUI/moc_CQExtender.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp_parameters [ 59%] Generating plotUI/moc_CQMarchingSquares.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotColors.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotEditWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQPlotSubwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp_parameters [ 59%] Generating plotUI/moc_CQSpectogramWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp_parameters [ 59%] Generating plotUI/moc_CQtChartsPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_CQwtPlot.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp_parameters [ 59%] Generating plotUI/moc_CSpectorgramData.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.h:0: Note: No relevant classes found. No output generated. [ 59%] Generating plotUI/moc_HistoWidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp_parameters [ 59%] Generating plotUI/moc_curve2dwidget.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp_parameters [ 59%] Generating plotUI/moc_plotwindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp_parameters [ 59%] Generating plotUI/moc_scrollbar.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp_parameters [ 59%] Generating plotUI/moc_scrollzoomer.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp_parameters [ 59%] Generating plotUI/ui_BandedGraphWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_BandedGraphWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.ui [ 59%] Generating plotUI/ui_CQAdvancedPlotSettings.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQAdvancedPlotSettings.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.ui [ 59%] Generating plotUI/ui_CQPlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQPlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.ui [ 59%] Generating plotUI/ui_CQSpectogramWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_CQSpectogramWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.ui [ 60%] Generating plotUI/ui_HistoWidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_HistoWidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.ui [ 60%] Generating plotUI/ui_PlotSubwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_PlotSubwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/PlotSubwidget.ui [ 60%] Generating plotUI/ui_curve2dwidget.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/ui_curve2dwidget.h /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.ui [ 60%] Generating qlayout/moc_CQAnimationControls.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationSettingsEditor.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp_parameters [ 60%] Generating qlayout/moc_CQAnimationWindow.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CFunction const * >' undefined. ../swig/CVector.i:137: Warning 401: 'CVectorCore< CFunction const * >' must be defined before it is used as a base class. /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:1: Warning 401: Base class 'CVectorCore< CObjectInterface const * >' undefined. ../swig/CVector.i:139: Warning 401: 'CVectorCore< CObjectInterface const * >' must be defined before it is used as a base class. [ 60%] Generating qlayout/moc_CQConnectionGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiAnimation.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQCopasiEffect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp_parameters [ 60%] Generating qlayout/moc_CQCopasiGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescription.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.h:0: Note: No relevant classes found. No output generated. [ 60%] Generating qlayout/moc_CQEffectDescriptionEdit.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp_parameters [ 60%] Generating qlayout/moc_CQElementProperties.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp_parameters [ 61%] Generating qlayout/moc_CQLabelGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutScene.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp_parameters [ 61%] Generating qlayout/moc_CQLayoutView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp_parameters [ 61%] Generating qlayout/moc_CQRenderConverter.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQRoundedRect.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.h:0: Note: No relevant classes found. No output generated. [ 61%] Generating qlayout/moc_CQStyledGraphicsItem.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp_parameters [ 61%] Generating qlayout/moc_CQZoomableView.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp_parameters [ 61%] Generating qlayout/ui_CQAnimationControls.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationControls.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.ui [ 62%] Generating qlayout/ui_CQAnimationSettingsEditor.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationSettingsEditor.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.ui [ 62%] Generating qlayout/ui_CQAnimationWindow.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQAnimationWindow.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.ui [ 62%] Generating qlayout/ui_CQEffectDescriptionEdit.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQEffectDescriptionEdit.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.ui [ 62%] Generating qlayout/ui_CQElementProperties.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/ui_CQElementProperties.h /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.ui [ 62%] Generating qrc_copasi.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/rcc --name copasi --output /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/copasi.qrc /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:59: Warning 401: Nothing known about base class 'SBMLUnitSupport'. Ignored. [ 62%] Generating resourcesUI/moc_CQIconResource.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CMathMLToTeX.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating tex/moc_CStructureParser.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/tex && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp_parameters /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:0: Note: No relevant classes found. No output generated. [ 63%] Generating undoUI/moc_CQUndoDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp_parameters [ 63%] Generating undoUI/moc_CQUndoDialog.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDialog.cpp_parameters [ 63%] Generating undoUI/ui_CQUndoDialog.h cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/ui_CQUndoDialog.h /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.ui [ 63%] Generating wizard/moc_wizard.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/wizard && /usr/lib64/qt5/bin/moc @/builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp_parameters cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi /builddir/build/BUILD/COPASI-Build-284/copasi/CMakeFiles/libCOPASIUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CMakeFiles/libCOPASIUI.dir/build.make copasi/CMakeFiles/libCOPASIUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQBiologicalDescriptionDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: Overloaded method CDataValue::CDataValue(int const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: as it is shadowed by CDataValue::CDataValue(CDataValue::Type const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:37: Warning 509: Overloaded method CDataValue::CDataValue(CDataValue::Type const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:41: Warning 509: as it is shadowed by CDataValue::CDataValue(int const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &). /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:50: Warning 509: Overloaded method CDataValue::CDataValue(std::vector< CDataValue,std::allocator< CDataValue > > const &) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/undo/CDataValue.h:51: Warning 509: as it is shadowed by CDataValue::CDataValue(std::vector< CData,std::allocator< CData > > const &). [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQCreatorDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CDataObject const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CDataObject const * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CFunction const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CFunction const * >::operator ()(size_t const &). /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:245: Warning 509: Overloaded method CVectorCore< CObjectInterface const * >::operator ()(size_t const &) const effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:237: Warning 509: as it is shadowed by CVectorCore< CObjectInterface const * >::operator ()(size_t const &). ../swig/CCopasiMessage.i:55: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:259: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,size_t,...). ../swig/CCopasiMessage.i:43: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *) effectively ignored, /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...). /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMessage.h:250: Warning 509: Overloaded method CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *,...) effectively ignored, ../swig/CCopasiMessage.i:43: Warning 509: as it is shadowed by CCopasiMessage::CCopasiMessage(CCopasiMessage::Type,char const *). [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAM/CModelMIRIAMInfo.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQMiriamWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 63%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQModifiedDM.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeView.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQRDFTreeViewItem.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/CQReferenceDM.cpp cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/../common/patch-wrapper.cmake -- Patching C++ wrapper cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -DBIN_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DSRC_DIRECTORY="/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python" -DVERSION=4.42.284 -P /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/patch-python.cmake -- Patching Python wrapper cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build.make copasi/bindings/python/CMakeFiles/binding_python_lib.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 64%] Building CXX object copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -Dbinding_python_lib_EXPORTS -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python -I/usr/include/python3.12 -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/bindings/python/CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -MF CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o.d -o CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/CQ3DBarsModifier.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4335: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/local_common.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:46, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/local.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:241:54: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 241 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CDataModel]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CDataModel; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CDataModel; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:245:48: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 245 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/common/downcast_common.cpp:265:59: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 265 | else if (dynamic_cast(container)) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvaluationTree]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvaluationTree; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvaluationTree; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘CDataObject* CVector_Sl_CDataObject_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6902:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6902 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CDataObject* CVector_Sl_CDataObject_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6916:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6916 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CFunction* CVector_Sl_CFunction_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6924:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6924 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘const CObjectInterface* CVector_Sl_CObjectInterface_SS_const_Sm__Sg__get(CVector*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 6938 | if (i >= self->size()) | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10692:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: 10692 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:6938:13: warning: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:10769:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 10769 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotItem]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotItem; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotItem; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘std::vector CDataHandler_getNthRow(CDataHandler*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14243:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 14243 | if (index >= data.size()) | ~~~~~~^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15414: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15467:42: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 15467 | return (CDataObject*)&((*self)[name]); /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:15517: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/BezierCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CArrow.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SBMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:198627:3: warning: deleting object of polymorphic class type ‘SBMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 198627 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_CSBMLExporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:199481:3: warning: deleting object of polymorphic class type ‘CSBMLExporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 199481 | delete arg1; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘PyObject* _wrap_delete_SEDMLImporter(PyObject*, PyObject*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:200350:3: warning: deleting object of polymorphic class type ‘SEDMLImporter’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor] 200350 | delete arg1; | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLReactionGlyph.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp: In member function ‘void CQSelectionWizardPage::fillTree(const CModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:46: warning: enum constant in boolean context [-Wint-in-bool-context] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:417:66: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 417 | pItem->setFlags(pItem->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:54: warning: enum constant in boolean context [-Wint-in-bool-context] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQAutolayoutWizard.cpp:434:74: warning: suggest parentheses around operand of ‘!’ or change ‘|’ to ‘||’ or ‘!’ to ‘~’ [-Wparentheses] 434 | pChild1->setFlags(pChild1->flags() & (!Qt::ItemIsUserCheckable | Qt::ItemIsEnabled)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CCompartmentGraphNode.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CDataEntity.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphCurve.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CGraphNode.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:95:16: note: by ‘virtual void CLMetabGlyph::exportToSBML(SpeciesGlyph*, const std::map&, std::map, const SBase*>&) const’ 95 | virtual void exportToSBML(SpeciesGlyph * g, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:168:16: note: by ‘virtual void CLCompartmentGlyph::exportToSBML(CompartmentGlyph*, const std::map&, std::map, const SBase*>&) const’ 168 | virtual void exportToSBML(CompartmentGlyph * cg, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalObject.h:163:16: warning: ‘virtual void CLGraphicalObject::exportToSBML(GraphicalObject*, const std::map&, std::map, const SBase*>&) const’ was hidden [-Woverloaded-virtual=] 163 | virtual void exportToSBML(GraphicalObject * sbmlobject, | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlyphs.h:258:16: note: by ‘virtual void CLTextGlyph::exportToSBML(TextGlyph*, const std::map&, std::map, const SBase*>&) const’ 258 | virtual void exportToSBML(TextGlyph * g, | ^~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CLabel.cpp [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQLayoutThread.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 64%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQPlayerControlWidget.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CQSpringLayoutParameterWindow.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CSimSummaryInfo.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/CVisParameters.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationControls.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationSettingsEditor.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:128:88: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 128 | const CEFMTask *task = dynamic_cast< const CEFMTask * >(&mpDataModel->getTaskList()->operator[]("Elementary Flux Modes")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp: In member function ‘virtual void QCustomTimeCourseAnimation::getScales(std::vector&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQAnimationWindow.cpp:348:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 348 | if (index == C_INVALID_INDEX) [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiAnimation.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiEffect.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQCopasiGraphicsItem.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescription.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQEffectDescriptionEdit.cpp [ 65%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQElementProperties.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLabelGraphicsItem.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLCurve.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQConnectionGraphicsItem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutScene.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQLayoutView.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGroup.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLStyle.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRoundedRect.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGlobalRenderInformation.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderResolver.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQStyledGraphicsItem.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQZoomableView.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/BandedGraphWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/C2DPlotCurve.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CBandedGraphData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CHistoCurveData.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CLinearColorMap.cpp [ 66%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/COutputHandlerPlot.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotSpectogram.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQAdvancedPlotSettings.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual bool CQCustomPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:549:8: warning: variable ‘needLeft’ set but not used [-Wunused-but-set-variable] 549 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘virtual void CQCustomPlot::wheelEvent(QWheelEvent*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1535:50: warning: ‘QPoint QWheelEvent::pos() const’ is deprecated: Use position() [-Wdeprecated-declarations] 1535 | QCPLayerable * element = layerableAt(event->pos(), true); | ~~~~~~~~~~^~ In file included from /usr/include/qt5/QtGui/QPaintEvent:1, from /usr/include/qcustomplot.h:56, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.h:24: /usr/include/qt5/QtGui/qevent.h:225:19: note: declared here 225 | inline QPoint pos() const { return p.toPoint(); } | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1632:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 1632 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1755:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1755 | if (current_count != data_size && pY2) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1759:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1759 | for (int i = current_count; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1784:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1784 | if (current_count != data_size && helper) | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1802:27: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1802 | if (data_size != current_count) | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1815:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1815 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1853:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 1853 | for (int count = 0; count < data_size; ++count) | ~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1894:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1894 | for (int l = 0; l < contours.size(); l++) | ~~^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1897:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1897 | for (int j = 0; j < contours[l].size(); j++) | ~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::resizeCurveData(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:1978:48: warning: unused variable ‘data’ [-Wunused-variable] 1978 | std::vector< CVector< double > * > & data = mData[activity]; | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::initializeIndependentData(const CDataModel&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2179:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 2179 | for (int c = 0; c < numCols; ++c) | ~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2170:14: warning: unused variable ‘independentObjects’ [-Wunused-variable] 2170 | auto & independentObjects = pExperiment->getIndependentObjects(); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp: In member function ‘void CQCustomPlot::updateSteadyStateInfo(int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQCustomPlot.cpp:2203:9: warning: unused variable ‘model’ [-Wunused-variable] 2203 | auto& model = *CRootContainer::getDatamodelList()->begin(); | ^~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184830:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRawWithOutputHandler’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13961:14: note: ‘success’ was declared here 13961 | bool success; | ^~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_initializeRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184792:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_initializeRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:13941:14: note: ‘success’ was declared here 13941 | bool success; | ^~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:12: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:47:1: warning: when initialized here [-Wreorder] 47 | CQDataVizPlot::CQDataVizPlot(QWidget * parent) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h: In constructor ‘CQDataVizPlot::CQDataVizPlot(const CPlotSpecification*, QWidget*, PlotMode)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:370:8: warning: ‘CQDataVizPlot::mReplotFinished’ will be initialized after [-Wreorder] 370 | bool mReplotFinished; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.h:167:8: warning: ‘bool CQDataVizPlot::m_isTouching’ [-Wreorder] 167 | bool m_isTouching; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:72:1: warning: when initialized here [-Wreorder] 72 | CQDataVizPlot::CQDataVizPlot(const CPlotSpecification * plotspec, QWidget * parent, PlotMode mode) | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::initFromSpec(const CPlotSpecification*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:267:8: warning: unused variable ‘needLeft’ [-Wunused-variable] 267 | bool needLeft = false; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:268:8: warning: unused variable ‘needRight’ [-Wunused-variable] 268 | bool needRight = false; | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::compile(CObjectInterface::ContainerList)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:372:12: warning: unused variable ‘isSpectogram’ [-Wunused-variable] 372 | bool isSpectogram = pItem->getType() == CPlotItem::spectogram; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In function ‘std::set resizeRange(std::set&, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:581:20: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 581 | if (range.size() < maxRange) | ~~~~~~~~~~~~~^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘void CQDataVizPlot::updateCurves(const size_t&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:634:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 634 | if (curve_activity != activity) | ~~~~~~~~~~~~~~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:656:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 656 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:704:25: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 704 | if (data_size != data_count) | ~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:710:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 710 | for (auto i = 0; i < data_size; ++i) | ~~^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:641:12: warning: unused variable ‘curve_type’ [-Wunused-variable] 641 | auto curve_type = (*itCurves)->property("curve_type").toInt(); | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:628:8: warning: unused variable ‘data_changed’ [-Wunused-variable] 628 | bool data_changed = false; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp: In member function ‘virtual bool CQDataVizPlot::saveData(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1024:26: warning: unused variable ‘scatter’ [-Wunused-variable] 1024 | QScatter3DSeries * scatter = qobject_cast< QScatter3DSeries * >(curve.second); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQDataVizPlot.cpp:1019:8: warning: unused variable ‘FirstHistogram’ [-Wunused-variable] 1019 | bool FirstHistogram = true; | ^~~~~~~~~~~~~~ In function ‘SWIG_From_bool(bool)’, inlined from ‘_wrap_CCopasiTask_processRaw’ at /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:184890:29: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:4787:25: warning: ‘success’ may be used uninitialized [-Wmaybe-uninitialized] 4787 | return PyBool_FromLong(value ? 1 : 0); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp: In function ‘_wrap_CCopasiTask_processRaw’: /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python/copasi_wrapper.cpp:14005:14: note: ‘success’ was declared here 14005 | bool success; | ^~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQExtender.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:76:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 76 | switch (cellSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘void CQMarchingSquares::isoSubpath(IsoCell*, int, int, levelPaths&, int&, int&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:547:10: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 547 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:584:14: warning: enumeration value ‘NONE’ not handled in switch [-Wswitch] 584 | switch (prevSide) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp: In member function ‘QPointF CQMarchingSquares::IsoCell::normalizedPointCCW(side)’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQMarchingSquares.cpp:90:1: warning: control reaches end of non-void function [-Wreturn-type] 90 | } | ^ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotColors.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotEditWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetabNameInterface.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp: In member function ‘void CQPlotSubwidget::addSpectrum()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.cpp:592:14: warning: variable ‘imax’ set but not used [-Wunused-but-set-variable] 592 | size_t imax; | ^~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQSpectogramWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQtChartsPlot.cpp [ 67%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CPlotInterface.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:46: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQwtPlot.h:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp: In member function ‘virtual double CSpectorgramData::value(double, double) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:342:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 342 | if (xpos == mSizeX) --xpos; | ~~~~~^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CSpectorgramData.cpp:344:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 344 | if (ypos == mSizeY) --ypos; | ~~~~~^~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotItem.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/CQPlotSubwidget.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp: In member function ‘HistoWidget::buttonPressedX()’: /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/HistoWidget.cpp:90:66: warning: ‘nonnull’ argument ‘this’ compared to NULL [-Wnonnull-compare] 90 | while (!(pParent = dynamic_cast< CQPlotSubwidget * >(tmp)) && this) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/curve2dwidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/plotwindow.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollbar.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/scrollzoomer.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:183:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 183 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:187:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 187 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp: In static member function ‘static void CMathMLToTeX::mtableNode(QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:210:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 210 | QXmlSimpleReader xmlReader; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CMathMLToTeX.cpp:214:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 214 | QXmlInputSource xmlSource; | ^~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:62:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 62 | QLinkedList mListOfUncompletedTags; | ^~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvarlengtharray.h:43, from /usr/include/qt5/QtCore/qmetatype.h:48, from /usr/include/qt5/QtCore/qobject.h:54, from /usr/include/qt5/QtCore/qiodevice.h:45, from /usr/include/qt5/QtCore/qtextstream.h:43, from /usr/include/qt5/QtXml/qxml.h:64, from /usr/include/qt5/QtXml/QXmlAttributes:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.h:26: /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:69:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 69 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp: In member function ‘virtual bool CStructureParser::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/tex/CStructureParser.cpp:337:3: warning: ‘template class QLinkedList’ is deprecated: Use std::list instead [-Wdeprecated-declarations] 337 | QLinkedList< QString >::iterator itL; | ^~~~~~~~~~~ /usr/include/qt5/QtCore/qcontainerfwd.h:51:26: note: declared here 51 | template class QLinkedList; | ^~~~~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/wizard.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/AboutDialog.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CColorScale.cpp [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlot2YSelectionDialog.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 68%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 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/usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiPlotSelectionDialog.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionDialog.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CCopasiSelectionWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.cpp:227:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 227 | dynamic_cast(& mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNATask.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CLNAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CLNAResultWidget.cpp:57:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: 57 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Linear Noise Approximation")); /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.cpp:298:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 298 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CMCAResultSubwidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultSubwidget.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCATask.h:43, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CMCAResultWidget.cpp:69:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/analytics/CAnalyticsTask.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQAnalyticsWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidgetDM.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBaseTreeDataModel.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPane.cpp [ 69%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:16: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:457:91: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: 457 | updateNode(findNodeFromId(ListViews::WidgetType::SteadyState), mpCopasiDM->getTaskList()->operator[]("Steady-State").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp: In member function ‘void CQBrowserPaneDM::createStaticDM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 993 | switch (pNodeInfo->node) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Compartments’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Species’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Reactions’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Events’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSets’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘Plots’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplates’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQBrowserPaneDM.cpp:993:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp: In constructor ‘CQCheckModelWindow::CQCheckModelWindow(CopasiUI3Window*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:21: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCheckModelWindow.cpp:88:47: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 88 | mpSelection->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQComboDelegate.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentCopyOptions.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentDM.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt 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/usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp: In member function ‘virtual void CQCompartmentsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartmentsWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCopasiApplication.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCrossSectionTaskWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDateTimeEditDelegate.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependenciesWidget.cpp:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyDialog.cpp [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDependencyWidget.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 70%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQDifferentialEquations.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMListWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp [ 71%] Linking CXX shared library _COPASI.so cd /builddir/build/BUILD/COPASI-Build-284/copasi/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -shared -Wl,-soname,_COPASI.so -o _COPASI.so CMakeFiles/binding_python_lib.dir/copasi_wrapper.cpp.o ../../libCOPASISE.a -lpython3.12 /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMNetReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMResultWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMSpeciesDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEFMWidget.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp: In member function ‘virtual void CQEventsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventsWidget.cpp:250:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 250 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpandModelData.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 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/usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperiment.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CExperimentSet.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘void CQExperimentData::slotFileEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:628:10: warning: unused variable ‘i’ [-Wunused-variable] 628 | size_t i = mpExperimentSetCopy->getExperimentCount() - 1; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp: In member function ‘bool CQExperimentData::saveTable(CExperiment*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentData.cpp:1537:8: warning: variable ‘FoundTime’ set but not used [-Wunused-but-set-variable] 1537 | bool FoundTime = false; | ^~~~~~~~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExperimentSelection.cpp [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 71%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:50: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h: In constructor ‘CQExpressionWidget::CQExpressionWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:273:15: warning: ‘CQExpressionWidget::mCursor’ will be initialized after [-Wreorder] 273 | QTextCursor mCursor; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:272:28: warning: ‘CQExpressionHighlighter* CQExpressionWidget::mpExpressionHighlighter’ [-Wreorder] 272 | CQExpressionHighlighter *mpExpressionHighlighter; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.cpp:218:1: warning: when initialized here [-Wreorder] 218 | CQExpressionWidget::CQExpressionWidget(QWidget * parent, const char * name) | ^~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/s390x-redhat-linux/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /usr/include/qt5/QtCore/qbytearray.h:52, from /usr/include/qt5/QtCore/qvariant.h:44, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:25: In member function ‘std::__new_allocator::construct(COptItem**, COptItem* const&)void’, inlined from ‘std::allocator_traits >::construct(std::allocator&, COptItem**, COptItem* const&)void’ at /usr/include/c++/14/bits/alloc_traits.h:531:17, inlined from ‘std::vector >::push_back(COptItem* const&)’ at /usr/include/c++/14/bits/stl_vector.h:1285:30, inlined from ‘CQFittingItemWidget::slotNew()’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1137:25: /usr/include/c++/14/bits/new_allocator.h:191:11: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotNew()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:1119:13: note: ‘pItem’ declared here 1119 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotParamEdit()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:452:29: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 452 | pItem->setObjectCN(Selection[i]->getCN()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:434:21: note: ‘pItem’ declared here 434 | COptItem *pItem; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp: In member function ‘CQFittingItemWidget::slotCopy()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:952:15: warning: ‘pItem’ may be used uninitialized [-Wmaybe-uninitialized] 952 | setTableText((int) row, pItem); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingItemWidget.cpp:925:13: note: ‘pItem’ declared here 925 | COptItem *pItem; | ^~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:51: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadExperimentSetIntoTree(const CExperimentSet&, QTreeWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: variable ‘pItem’ set but not used [-Wunused-but-set-variable] 144 | QTreeWidgetItem* pItem = NULL; | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:208:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: 208 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Parameter Estimation")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:144:20: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘virtual bool CQFittingResult::enterProtected()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:275:32: warning: unused variable ‘Solutions’ [-Wunused-variable] 275 | const CVector< C_FLOAT64 > & Solutions = mpProblem->getSolutionVariables(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:276:32: warning: unused variable ‘StdDeviations’ [-Wunused-variable] 276 | const CVector< C_FLOAT64 > & StdDeviations = mpProblem->getVariableStdDeviations(); | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:277:32: warning: unused variable ‘Gradients’ [-Wunused-variable] 277 | const CVector< C_FLOAT64 > & Gradients = mpProblem->getVariableGradients(); | ^~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp: In member function ‘void CQFittingResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:525:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 525 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResult.cpp:530:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 530 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/parameterFitting/CFitProblem.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingResultTab1.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:52: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp: In member function ‘virtual bool CQFittingWidget::taskFinishedEvent()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFittingWidget.cpp:309:8: warning: unused variable ‘result’ [-Wunused-variable] 309 | bool result = TaskWidget::taskFinishedEvent(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFluxModeDM.cpp [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionDM.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp: In member function ‘virtual void CQFunctionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQFunctionsWidget.cpp:243:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 243 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp: In member function ‘virtual void CQGlobalQuantitiesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantitiesWidget.cpp:251:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 251 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQGlobalQuantityDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLNAWidget.cpp:60:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 60 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CLayout; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:36:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: 36 | class CListOfLayouts : public CDataVectorN< CLayout > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CLayout]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CLayout; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CLayout; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLayoutsWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 72%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: by ‘static void CLyapWolfMethod::add(double*, const double*, const double&, const double*)’ 237 | static void add(C_FLOAT64* dbl1, const C_FLOAT64* dbl1End, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapResultWidget.cpp:77:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: 77 | mpTask = dynamic_cast(&mpDataModel->getTaskList()->operator[]("Lyapunov Exponents")); /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:237:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQLyapWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateMethod.h:42, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:44: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CSteadyStateTask.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMCAWidget.cpp:69:69: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 69 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMathMatrixWidget.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMathMatrixWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMatrixDialog.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMergingData.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp: In member function ‘virtual int CQMessageBox::exec()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMessageBox.cpp:454:7: warning: unused variable ‘result’ [-Wunused-variable] 454 | int result = QDialog::exec(); | ^~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h: In constructor ‘CQModelValue::CQModelValue(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:65:15: warning: ‘CQModelValue::mObjectCNToCopy’ will be initialized after [-Wreorder] 65 | CCommonName mObjectCNToCopy; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:57:17: warning: ‘CModelValue* CQModelValue::mpModelValue’ [-Wreorder] 57 | CModelValue * mpModelValue; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.cpp:50:1: warning: when initialized here [-Wreorder] 50 | CQModelValue::CQModelValue(QWidget* parent, const char* name) | ^~~~~~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.h:17, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskWidget.cpp [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMultipleSelectionDialog.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 73%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNameSelectionDialog.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:64: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:65: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual QValidator::State CQValidatorXML::validate(QString&, int&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:85:20: warning: ‘QXmlSimpleReader’ is deprecated: Use QXmlStreamReader [-Wdeprecated-declarations] 85 | QXmlSimpleReader Validator; | ^~~~~~~~~ In file included from /usr/include/qt5/QtXml/QXmlInputSource:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:24: /usr/include/qt5/QtXml/qxml.h:275:75: note: declared here 275 | class QT_DEPRECATED_VERSION_X(5, 15, "Use QXmlStreamReader") Q_XML_EXPORT QXmlSimpleReader | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:86:19: warning: ‘QXmlInputSource’ is deprecated [-Wdeprecated-declarations] 86 | QXmlInputSource Input; | ^~~~~ /usr/include/qt5/QtXml/qxml.h:197:49: note: declared here 197 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlInputSource | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::startElement(const QString&, const QString&, const QString&, const QXmlAttributes&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:153:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 153 | return QXmlDefaultHandler::startElement(namespaceURI, localName, qName, atts); | ^~~~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp: In member function ‘virtual bool CQNotesContentHandler::endElement(const QString&, const QString&, const QString&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.cpp:163:30: warning: ‘QXmlDefaultHandler’ is deprecated [-Wdeprecated-declarations] 163 | return QXmlDefaultHandler::endElement(namespaceURI, localName, qName); | ^~~~~~~~~~ /usr/include/qt5/QtXml/qxml.h:407:49: note: declared here 407 | class QT_DEPRECATED_VERSION(5, 15) Q_XML_EXPORT QXmlDefaultHandler : public QXmlContentHandler, | ^~~~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CMathContext.h:10, from /builddir/build/BUILD/COPASI-Build-284/copasi/OpenMP/CPointerMathContext.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptMethod.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptPopulationMethod.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQEllipseItem::paint(QPainter*, const QStyleOptionGraphicsItem*, QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:90:12: warning: unused variable ‘m11’ [-Wunused-variable] 90 | double m11 = painter->transform().m11(); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::output(const COutputInterface::Activity&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:472:34: warning: comparison of integer expressions of different signedness: ‘std::vector*>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 472 | if (mPopulation.size() > mMaxIterations) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In function ‘QString vec_to_string(CVector*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:541:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 541 | for (int i = 1; i < pVec->size(); ++i) | ~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp: In member function ‘virtual void CQOptPopulation::update()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:720:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 720 | i == mMinIndex, | ~~^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptPopulation.cpp:743:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 743 | i == mMinIndex, | ~~^~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:98:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 98 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Optimization")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp: In member function ‘void CQOptimizationResult::loadLog(const COptMethod*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:191:28: warning: unused variable ‘subTextItem’ [-Wunused-variable] 191 | QTreeWidgetItem* subTextItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getSubtext())); | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationResult.cpp:196:28: warning: unused variable ‘statusDetailItem’ [-Wunused-variable] 196 | QTreeWidgetItem* statusDetailItem = new QTreeWidgetItem(item, QStringList() << FROM_UTF8(it->getStatusDetails())); | ^~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOscillationTaskWidget.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp: In member function ‘void CQParameterEstimationResult::applyToModelState()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterEstimationResult.cpp:309:15: warning: unused variable ‘current’ [-Wunused-variable] 309 | int current = model->rowCount(); | ^~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupDM.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterGroupView.cpp [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp: In static member function ‘static QVariant CQParameterOverviewDM::diffData(const CModelParameter*, int)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:373:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 373 | switch (pNode->getCompareResult()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewDM.cpp:400:16: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 400 | switch (pNode->getCompareResult()) | ^ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterOverviewWidget.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:44, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterResultItemModel.cpp:13: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/optimization/COptProblem.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp: In member function ‘virtual QVariant CQParameterSetsDM::data(const QModelIndex&, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsDM.cpp:91:37: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 91 | if (mpListOfParameterSets->size() <= index.row()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp: In member function ‘virtual void CQParameterSetsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQParameterSetsWidget.cpp:267:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 74%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/plot/CPlotSpecification.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here 31 | class COutputDefinitionVector : public CDataVectorN | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp: In member function ‘virtual void CQPlotsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPlotsWidget.cpp:275:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 275 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPreferenceDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressDialog.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItem.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemBar.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQProgressItemText.cpp [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/qabstractitemmodel.h:43, from /usr/include/qt5/QtCore/qabstractproxymodel.h:43, from /usr/include/qt5/QtCore/qsortfilterproxymodel.h:43, from /usr/include/qt5/QtCore/QSortFilterProxyModel:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:13: In member function ‘QMapNode::lowerBound(QAbstractButton* const&)’, inlined from ‘QMapData::findNode(QAbstractButton* const&) const’ at /usr/include/qt5/QtCore/qmap.h:288:33, inlined from ‘QMap::operator[](QAbstractButton* const&)’ at /usr/include/qt5/QtCore/qmap.h:681:26, inlined from ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’ at /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:98:25: /usr/include/qt5/QtCore/qmap.h:153:9: warning: ‘pEditor’ may be used uninitialized [-Wmaybe-uninitialized] 153 | if (!qMapLessThanKey(n->key, akey)) { | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp: In member function ‘CQPushButtonDelegate::createEditor(QWidget*, QStyleOptionViewItem const&, QModelIndex const&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQPushButtonDelegate.cpp:58:21: note: ‘pEditor’ was declared here 58 | QAbstractButton * pEditor; | ^~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionDM.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In constructor ‘CQReactionsWidget::CQReactionsWidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:81:22: warning: unused variable ‘pWindow’ [-Wunused-variable] 81 | CopasiUI3Window *pWindow = dynamic_cast(parent->parent()); | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp: In member function ‘virtual void CQReactionsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReactionsWidget.cpp:230:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDM.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinition.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportDefinitionSelect.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 75%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportListItem.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp: In member function ‘virtual void CQReportsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQReportsWidget.cpp:229:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 229 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSBMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLFileDialog.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:11: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:14: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameter.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp: In member function ‘virtual bool CQScanWidgetParameterSet::save(CCopasiParameterGroup*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.cpp:112:1: warning: control reaches end of non-void function [-Wreturn-type] 112 | } | ^ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScrolledDependenciesWidget.cpp:6: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSensResultWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSensResultWidget.cpp:85:57: required from here 85 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Sensitivities")); | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:20: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h: In constructor ‘CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:116:40: warning: ‘CQSimpleSelectionTree::mpOutputVector’ will be initialized after [-Wreorder] 116 | std::vector< const CDataObject * > * mpOutputVector; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.h:112:26: warning: ‘CExpressionGenerator* CQSimpleSelectionTree::mpExpressionGenerator’ [-Wreorder] 112 | CExpressionGenerator * mpExpressionGenerator; | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: when initialized here [-Wreorder] 44 | CQSimpleSelectionTree::CQSimpleSelectionTree(QWidget *parent) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:427:64: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: 427 | task = dynamic_cast(&pDataModel->getTaskList()->operator[]("Metabolic Control Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSimpleSelectionTree.cpp:44:1: warning: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSortFilterProxyModel.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpecieDM.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.cpp:28: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp: In member function ‘virtual void CQSpeciesWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesWidget.cpp:258:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 258 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpinBoxDelegate.cpp [ 76%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSplashWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQStartValueReset.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here 52 | CDataVectorNS < CMetab > mMetabolites; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.cpp:80:65: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 80 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Steady-State")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:36: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.cpp:87:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: 87 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultWidget.cpp:82:57: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 82 | dynamic_cast(&pDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSATimeScaleWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQTSSAResultSubWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAResultSubWidget.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:224:58: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 224 | dynamic_cast(&mpDataModel->getTaskList()->operator[]("Time Scale Separation Analysis")); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp: In member function ‘CQTSSAWidget::runTask()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTSSAWidget.cpp:231:30: warning: ‘this’ pointer is null [-Wnonnull] 231 | mpTSSMethod->emptyVectors(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSATask.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/tssanalysis/CTSSAMethod.h:157:8: note: in a call to non-static member function ‘CTSSAMethod::emptyVectors()’ 157 | void emptyVectors(); | ^~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTabWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableView.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTableWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskBtnWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskHeaderWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskMethodWidget.cpp [ 77%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTaskThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTextDialog.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQThread.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensTask.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:18: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/timesens/CTimeSensProblem.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSensWidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesDM.cpp:19: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/crosssection/CCrossSectionTask.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTimeSeriesWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQTrajectoryWidget.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:15: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:48: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:38: /builddir/build/BUILD/COPASI-Build-284/copasi/lna/CLNAMethod.h:171:11: note: by ‘int CLNAMethod::load(CReadConfig&)’ 171 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiMethod.h:135:16: warning: ‘virtual void CCopasiMethod::load(CReadConfig&, CReadConfig::Mode)’ was hidden [-Woverloaded-virtual=] 135 | virtual void load(CReadConfig & configBuffer, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:88: /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: by ‘int CMCAMethod::load(CReadConfig&)’ 151 | C_INT32 load(CReadConfig & configBuffer); | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/steadystate/CMCAMethod.h:151:11: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:169, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:17: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ChemEqValidator.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiGuiTypes.h:20: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp: In member function ‘void CQUndoTester::testModelDetail()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUndoTester.cpp:163:11: warning: unused variable ‘pModel’ [-Wunused-variable] 163 | CModel* pModel = (*CRootContainer::getDatamodelList())[0].getModel(); | ^~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDM.cpp:30: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinition.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:16: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:21: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitDetail.cpp:26: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:24: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp: In member function ‘virtual void CQUnitsWidget::slotDoubleClicked(QModelIndex)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUnitsWidget.cpp:245:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | index.row() < pVector->size()) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdateAvogadro.cpp [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQUpdatesWidget.cpp:35: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 78%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidatorUnit.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanContainerWidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRandom.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetRepeat.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetScan.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanWidgetTask.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CUpDownSubwidget.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CWindowInterface.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiFileDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CopasiSlider.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:46: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:58: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:79:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 79 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_algobase.h:65, from /usr/include/c++/14/bits/specfun.h:43, from /usr/include/c++/14/cmath:3898, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:25: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiTree.h:164:17: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 164 | public std::iterator< std::forward_iterator_tag, _Node, ptrdiff_t > | ^~~~~~~~ /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:20, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLineEnding.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLRenderInformationBase.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLLocalRenderInformation.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLayout.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLTransformation2D.h:100:16: warning: ‘virtual void CLTransformation2D::addSBMLAttributes(Transformation2D*) const’ was hidden [-Woverloaded-virtual=] 100 | virtual void addSBMLAttributes(Transformation2D* pTransformation) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: note: by ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ 94 | virtual void addSBMLAttributes(GraphicalPrimitive1D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive1D.h:94:16: warning: ‘virtual void CLGraphicalPrimitive1D::addSBMLAttributes(GraphicalPrimitive1D*) const’ was hidden [-Woverloaded-virtual=] /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CLGraphicalPrimitive2D.h:83:17: note: by ‘virtual void CLGraphicalPrimitive2D::addSBMLAttributes(GraphicalPrimitive2D*) const’ 83 | virtual void addSBMLAttributes(GraphicalPrimitive2D* pPrimitive) const; | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:263:31: warning: ‘virtual const std::string& CDataObject::getKey() const’ was hidden [-Woverloaded-virtual=] 263 | virtual const std::string & getKey() const; | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:71: /builddir/build/BUILD/COPASI-Build-284/copasi/layout/CListOfLayouts.h:49:22: note: by ‘const std::string& CListOfLayouts::getKey()’ 49 | const std::string& getKey(); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:29: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h: In constructor ‘DataModelGUI::DataModelGUI(QObject*, CDataModel*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:183:24: warning: ‘DataModelGUI::mpOutputHandlerPlot’ will be initialized after [-Wreorder] 183 | COutputHandlerPlot * mpOutputHandlerPlot; | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.h:182:16: warning: ‘CDataModel* DataModelGUI::mpDataModel’ [-Wreorder] 182 | CDataModel * mpDataModel; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:96:1: warning: when initialized here [-Wreorder] 96 | DataModelGUI::DataModelGUI(QObject * parent, CDataModel * pDataModel): | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::notifyChanges(const CUndoData::CChangeSet&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:819:18: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 819 | switch (it->type) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp: In member function ‘void DataModelGUI::addRecentFile(const std::string&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘OMEX’ not handled in switch [-Wswitch] 952 | switch (mpDataModel->getContentType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DataModelGUI.cpp:952:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/DefaultplotDialog.cpp [ 79%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp: In member function ‘bool FunctionWidget1::loadParameterTable()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.cpp:152:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 152 | switch (params[i]->getUsage()) | ^ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/MyLineEdit.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserItem.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ObjectBrowserWidget.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: 52 | CDataVectorNS < CMetab > mMetabolites; /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:53: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:54: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp: In member function ‘void ReactionsWidget1::FillWidgetFromRI()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:406:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 406 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtCore/qvariant.h:47, from /usr/include/qt5/QtCore/QVariant:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:16: /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.cpp:421:35: warning: ‘QMap::iterator QMap::insertMulti(const Key&, const T&) [with Key = QString; T = QString]’ is deprecated: Use QMultiMap for maps storing multiple values with the same key. [-Wdeprecated-declarations] 421 | Compartments.insertMulti(Name.toLower(), Name); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtCore/qmap.h:1366:33: note: declared here 1366 | typename QMap::iterator QMap::insertMulti(const Key &key, const T &value) | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanMethod.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanTask.h:38, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ScanWidget.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensWidgetComboBox.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SensitivitiesWidget.cpp:45: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/sensitivities/CSensProblem.h:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:55: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:861:94: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 861 | mpParentWindow->getMainWidget()->getTrajectoryWidget()->enter(pDataModel->getTaskList()->operator[]("Time-Course").getCN()); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp: In member function ‘std::vector* SliderDialog::getCSlidersForObject(CDataObject*, std::vector*) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderDialog.cpp:1087:8: warning: variable ‘issueWarning’ set but not used [-Wunused-but-set-variable] 1087 | bool issueWarning = false; | ^~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SliderSettingsDialog.cpp [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:38: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h: In constructor ‘StateSubwidget::StateSubwidget(QWidget*, const char*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:46:12: warning: ‘StateSubwidget::mpModel’ will be initialized after [-Wreorder] 46 | CModel * mpModel; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:45:28: warning: ‘const CSteadyStateTask* StateSubwidget::mpTask’ [-Wreorder] 45 | const CSteadyStateTask * mpTask; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.cpp:53:1: warning: when initialized here [-Wreorder] 53 | StateSubwidget::StateSubwidget(QWidget* parent, const char* name) | ^~~~~~~~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CProcessReport.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CProgressBar.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:32: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_StateSubwidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/StateSubwidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSteadyStateResult.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSteadyStateResult.h:16, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/SteadyStateWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ [ 80%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:56: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/TaskWidget.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiWidget.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 81%] Built target binding_python_lib /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CMakeFiles/CopasiSE.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build.make copasi/CopasiSE/CMakeFiles/CopasiSE.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 81%] Building CXX object copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSE/CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -MF CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o.d -o CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:41: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:48: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:57: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CSparseMatrix.h:148:19: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 148 | public std::iterator< std::forward_iterator_tag, C_FLOAT64, ptrdiff_t > | ^~~~~~~~ In file included from /usr/include/c++/14/bits/stl_iterator_base_funcs.h:66, from /usr/include/c++/14/string:47, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:31: /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:25: required from here /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: 525 | size_t imax = TaskList.size(); /usr/include/c++/14/bits/stl_iterator_base_types.h:127:34: note: | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘int runScheduledTasks(CProcessReport*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:525:10: warning: unused variable ‘imax’ [-Wunused-variable] 525 | size_t imax = TaskList.size(); | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:63: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:78: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMoiety.h:235:8: note: by ‘void CMoiety::add(double, CMetab*)’ 235 | void add(C_FLOAT64 value, CMetab * metabolite); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:33: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp: In function ‘exportSBML()’: /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE/CopasiSE.cpp:827:27: warning: ‘SBMLSchema’ may be used uninitialized [-Wmaybe-uninitialized] 827 | copasi::SBMLSchema_enum SBMLSchema; | ^~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:96: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:35: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:59: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h: In constructor ‘CopasiUI3Window::CopasiUI3Window()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:626:8: warning: ‘CopasiUI3Window::mSBWIgnoreShutdownEvent’ will be initialized after [-Wreorder] 626 | bool mSBWIgnoreShutdownEvent; | ^~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.h:459:11: warning: ‘QMenu* CopasiUI3Window::mpMenuSEDMLSupport’ [-Wreorder] 459 | QMenu * mpMenuSEDMLSupport; | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:242:1: warning: when initialized here [-Wreorder] 242 | CopasiUI3Window::CopasiUI3Window(): | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotUpdateMIRIAM()’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: variable ‘success’ set but not used [-Wunused-but-set-variable] 2551 | bool success = true; | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:3856:22: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: 3856 | for (auto & task : taskList) /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:2551:8: warning: | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCopasiTask]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCopasiTask; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCopasiTask; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCopasiTask; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp: In member function ‘void CopasiUI3Window::slotCheckForUpdateFinished(bool)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/copasiui3window.cpp:4195:24: warning: unused variable ‘pReject’ [-Wunused-variable] 4195 | QPushButton *pReject = Question.addButton(QMessageBox::Cancel); | ^~~~~~~ [ 81%] Linking CXX executable CopasiSE cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSE && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSE.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiSE.dir/CopasiSE.cpp.o -o CopasiSE ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:49: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQNotes.h:50, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelWidget.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:47: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:70: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:32: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:114: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h: At global scope: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataArray.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQArrayAnnotationsWidget.h:45, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQMoietiesTaskResult.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMoietiesTaskResult.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:66: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::createWidgetFromId(const WidgetType&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 504 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:504:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findTabWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘NotFound’ not handled in switch [-Wswitch] 837 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘COPASI’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Model’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CompartmentDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SpeciesDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReactionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘GlobalQuantityDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘EventDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterOverview’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterSetDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘DifferentialEquations’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Matrices’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Diagrams’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyState’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SteadyStateResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModes’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ElementaryModesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MassConservationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourse’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘MetabolicControlAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponents’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LyapunovExponentsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeScaleSeparationAnalysisResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘TimeCourseSensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSection’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘CrossSectionResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterScan’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Optimization’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OptimizationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ParameterEstimationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Sensitivities’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘SensitivitiesResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘LinearNoiseApproximationResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘Oscillation’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘PlotDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘ReportTemplateDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘FunctionDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘UnitDetail’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:837:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp: In member function ‘CopasiWidget* ListViews::findWidgetFromId(const WidgetType&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Biochemical’ not handled in switch [-Wswitch] 908 | switch (id) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Mathematical’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘UpdateOrder’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Tasks’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘StoichiometricAnalysis’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘Analytics’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘AnalyticsResult’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘OutputSpecifications’ not handled in switch [-Wswitch] /builddir/build/BUILD/COPASI-Build-284/copasi/UI/listviews.cpp:908:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/objectdebug.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReactionInterface.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:39: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnit.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelValue.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:39: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunction.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:47: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:22, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:40: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterGroup.h:174:33: warning: ‘virtual const CModelParameter::CompareResult& CModelParameterGroup::diff(const CModelParameter&, const CCore::Framework&, const bool&)’ was hidden [-Woverloaded-virtual=] 174 | const virtual CompareResult & diff(const CModelParameter& other, | ^~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModelParameterSet.h:192:25: note: by ‘const CModelParameter::CompareResult& CModelParameterSet::diff(const CModelParameterSet&, const CCore::Framework&, const bool&)’ 192 | const CompareResult & diff(const CModelParameterSet & other, | ^~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitValidator.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:43: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp: In member function ‘void ParameterTable::updateTable(CReactionInterface&, CReaction*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/parametertable.cpp:202:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 202 | switch (ri.getUsage(i)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QVariant getParameterValue(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:82:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 82 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘QList > getParameterValidValues(const CCopasiParameter*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:146:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 146 | switch (pParameter->getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp: In function ‘bool setParameterValue(CCopasiParameter*, const QVariant&)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/qtUtilities.cpp:220:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 220 | switch (pParameter->getType()) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/CQIconResource.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘QVariant CQUndoDM::displayData(const QModelIndex&) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:98:27: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | if (mpUndoStack->size() <= index.row() || | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:107:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 107 | return (index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:116:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 116 | if ((index.row() <= mpUndoStack->currentIndex() && | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:153:20: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 153 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:197:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 197 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:241:24: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 241 | switch (Property.getType()) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:104:10: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 104 | switch (static_cast< ColumnType >(index.column())) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp: In member function ‘virtual QVariant CQUndoDM::headerData(int, Qt::Orientation, int) const’: /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDM.cpp:296:14: warning: enumeration value ‘__SIZE’ not handled in switch [-Wswitch] 296 | switch (static_cast< ColumnType >(section)) | ^ [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/CQUndoDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/CQUndoDialog.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qrc_copasi.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qrc_copasi.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -MF CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/barChart/moc_CQ3DBarsModifier.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/barChart/moc_CQ3DBarsModifier.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_BezierCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_BezierCurve.cpp [ 81%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CArrow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CArrow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CCompartmentGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CCompartmentGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CDataEntity.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CDataEntity.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphCurve.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CGraphNode.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CGraphNode.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CLabel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CLabel.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQAutolayoutWizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQAutolayoutWizard.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQCurrentValueTable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQCurrentValueTable.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQLayoutThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQLayoutThread.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQPlayerControlWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQPlayerControlWidget.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CQSpringLayoutParameterWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CQSpringLayoutParameterWindow.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CSimSummaryInfo.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CSimSummaryInfo.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -MF CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/layoutUI/moc_CVisParameters.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI/moc_CVisParameters.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQBiologicalDescriptionDM.cpp [ 82%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQCreatorDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQCreatorDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQMiriamWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQMiriamWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQModifiedDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQModifiedDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeView.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQRDFTreeViewItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQRDFTreeViewItem.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/MIRIAMUI/moc_CQReferenceDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI/moc_CQReferenceDM.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_BandedGraphWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_BandedGraphWidget.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_C2DPlotCurve.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_C2DPlotCurve.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CBandedGraphData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CBandedGraphData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CHistoCurveData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CHistoCurveData.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CLinearColorMap.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CLinearColorMap.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_COutputHandlerPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_COutputHandlerPlot.cpp [ 83%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotInterface.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CPlotSpectogram.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CPlotSpectogram.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQAdvancedPlotSettings.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQAdvancedPlotSettings.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQCustomPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQCustomPlot.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQDataVizPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQDataVizPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQExtender.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQExtender.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQMarchingSquares.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQMarchingSquares.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotColors.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotColors.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotEditWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotEditWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQPlotSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQPlotSubwidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQSpectogramWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQSpectogramWidget.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQtChartsPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQtChartsPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CQwtPlot.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CQwtPlot.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_CSpectorgramData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_CSpectorgramData.cpp [ 84%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_HistoWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_HistoWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_curve2dwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_curve2dwidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_plotwindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_plotwindow.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollbar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollbar.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -MF CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/plotUI/moc_scrollzoomer.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/plotUI/moc_scrollzoomer.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CMathMLToTeX.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CMathMLToTeX.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -MF CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/tex/moc_CStructureParser.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/tex/moc_CStructureParser.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_AboutDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_AboutDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CColorScale.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CColorScale.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlot2YSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlot2YSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiPlotSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiPlotSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionDialog.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CCopasiSelectionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CCopasiSelectionWidget.cpp [ 85%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CLNAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CLNAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultSubwidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CMCAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CMCAResultWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CProgressBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CProgressBar.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQAnalyticsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQAnalyticsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidget.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQArrayAnnotationsWidgetDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQArrayAnnotationsWidgetDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBaseTreeDataModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBaseTreeDataModel.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPane.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPane.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQBrowserPaneDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQBrowserPaneDM.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCheckModelWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCheckModelWindow.cpp [ 86%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQComboDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQComboDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartment.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQCompartment.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQCompartment.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartment.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentCopyOptions.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentCopyOptions.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCompartmentsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCompartmentsWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCopasiApplication.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCopasiApplication.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQCrossSectionTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQCrossSectionTaskWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDateTimeEditDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDateTimeEditDelegate.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependenciesWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyDialog.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDependencyWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDependencyWidget.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQDifferentialEquations.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQDifferentialEquations.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMListWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMListWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMNetReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMNetReactionDM.cpp [ 87%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMReactionDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMResultWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMSpeciesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMSpeciesDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEFMWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEFMWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventDM.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQEventWidget1.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQEventWidget1.h:25, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 528 | CDataVectorN < CEventAssignment > mAssignments; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQEventsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQEventsWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpandModelData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpandModelData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentData.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExperimentSelection.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExperimentSelection.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionMmlStackedWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionMmlStackedWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQExpressionWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQExpressionWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingItemWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingItemWidget.cpp [ 88%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResult.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingResultTab1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingResultTab1.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFittingWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFittingWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFluxModeDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFluxModeDM.cpp In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQFunctionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQFunctionsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantitiesWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQGlobalQuantityDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQGlobalQuantityDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLNAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLNAWidget.cpp In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsDM.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLayoutsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLayoutsWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapResultWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQLyapWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQLyapWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMCAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMCAWidget.cpp [ 89%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMathMatrixWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMathMatrixWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMatrixDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMatrixDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMergingData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMergingData.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMessageBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMessageBox.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMmlScrollView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMmlScrollView.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelValue.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQModelValue.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQModelValue.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelValue.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQModelWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQModelWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskResult.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMoietiesTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMoietiesTaskWidget.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQMultipleSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQMultipleSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNameSelectionDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNameSelectionDialog.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQNotes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQNotes.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptPopulation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptPopulation.cpp [ 90%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationResult.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOptimizationWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQOptimizationWidget.h:29, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQOptimizationWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOptimizationWidget.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQOscillationTaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQOscillationTaskWidget.cpp gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [ 91%] Built target CopasiSE /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build.make copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [ 91%] Building CXX object copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -isystem /usr/include/sbml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -MD -MT copasi/CopasiSBW/CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -MF CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o.d -o CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterEstimationResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterEstimationResult.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:19, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:27, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:23, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW/SBWTranslator.cpp:27: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CEvent.h:528:37: required from here 528 | CDataVectorN < CEventAssignment > mAssignments; | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEventAssignment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEventAssignment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEventAssignment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEventAssignment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 51 | CDataVectorNS< CFunctionParameter > mParameters; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CRootContainer.h:9, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:20: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathEvent.h:22: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:111:31: warning: ‘virtual const CDataObject* CDataContainer::getValueObject() const’ was hidden [-Woverloaded-virtual=] 111 | virtual const CDataObject * getValueObject() const override; | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:828:17: note: by ‘CMathObject* CMathContainer::getValueObject(const CMathObject*) const’ 828 | CMathObject * getValueObject(const CMathObject * pInitialObject) const; | ^~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:31: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:186:31: warning: ‘virtual const CDataObject* CDataObject::getDataObject() const’ was hidden [-Woverloaded-virtual=] 186 | virtual const CDataObject * getDataObject() const override; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:579:17: note: by ‘CDataObject* CMathContainer::getDataObject(const double*) const’ 579 | CDataObject * getDataObject(const C_FLOAT64 * pDataValue) const; | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataObject.h:180:18: warning: ‘virtual void* CDataObject::getValuePointer() const’ was hidden [-Woverloaded-virtual=] 180 | virtual void * getValuePointer() const override; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:821:15: note: by ‘double* CMathContainer::getValuePointer(const double*) const’ 821 | C_FLOAT64 * getValuePointer(const C_FLOAT64 * pInitialValue) const; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:139:18: warning: ‘virtual size_t CDataContainer::getIndex(const CDataObject*) const’ was hidden [-Woverloaded-virtual=] 139 | virtual size_t getIndex(const CDataObject * pObject) const; | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CReaction.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:34: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: by ‘int CMetabOld::getIndex() const’ 450 | C_INT32 getIndex() const; | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CCompartment.h:52:28: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: 52 | CDataVectorNS < CMetab > mMetabolites; /builddir/build/BUILD/COPASI-Build-284/copasi/model/CMetab.h:450:11: note: | ^~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CMetab]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CMetab; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CMetab; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CMetab; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/core/CArray.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:43: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: by ‘CLinkMatrix& CLinkMatrix::operator=(const CLinkMatrix&)’ 20 | class CLinkMatrix: public CMatrix< C_FLOAT64 > | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1175:34: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: 1175 | CDataVectorNS < CCompartment > mCompartments; /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CLinkMatrix.h:20:7: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CCompartment]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CCompartment; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CCompartment; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CCompartment; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1190:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1190 | CDataVectorNS< CReaction > mSteps; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReaction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReaction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReaction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReaction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1195:26: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1195 | CDataVectorN< CEvent > mEvents; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CEvent]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CEvent; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CEvent; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CEvent; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1205:31: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1205 | CDataVectorN< CModelValue > mValues; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelValue]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelValue; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelValue; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelValue; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/model/CModel.h:1215:38: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 1215 | CDataVectorN< CModelParameterSet > mParameterSets; /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CModelParameterSet]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CModelParameterSet; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CModelParameterSet; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CModelParameterSet; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:27:33: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 27 | class CUnitDefinitionDB: public CDataVectorN< CUnitDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CUnitDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CUnitDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CUnitDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1223:16: warning: ‘bool CDataVectorN::add(CDataObject*, const bool&) [with CType = CUnitDefinition]’ was hidden [-Woverloaded-virtual=] 1223 | virtual bool add(CDataObject * pObject, const bool & adopt = true) | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiModelTypes.h:53: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: by ‘CUnitDefinitionDB::add’ 39 | virtual bool add(CUnitDefinition * src, bool adopt = false); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/report/CReportDefinitionVector.h:35:39: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: 35 | class CReportDefinitionVector: public CDataVectorN< CReportDefinition > /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CUnitDefinitionDB.h:39:16: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CReportDefinition]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CReportDefinition; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CReportDefinition; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CReportDefinition; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/plot/COutputDefinitionVector.h:31:40: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: 31 | class COutputDefinitionVector : public CDataVectorN /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CPlotSpecification]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CPlotSpecification; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CPlotSpecification; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CPlotSpecification; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:238:29: warning: ‘CMatrix& CMatrix::operator=(const CType&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 238 | virtual CMatrix & operator = (const CType & value) | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryTask.h:41, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTypes.h:25: /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CMatrix.h:217:29: warning: ‘CMatrix& CMatrix::operator=(const CMatrix&) [with CType = double]’ was hidden [-Woverloaded-virtual=] 217 | virtual CMatrix & operator = (const CMatrix & rhs) | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTimeSeries.h:45:17: note: by ‘CTimeSeries& CTimeSeries::operator=(const CTimeSeries&)’ 45 | CTimeSeries & operator= (const CTimeSeries &); | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapTask.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:40: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:142:16: warning: ‘virtual void CLyapMethod::start(CVectorCore&)’ was hidden [-Woverloaded-virtual=] 142 | virtual void start(CVectorCore< C_FLOAT64 > & initialState); | ^~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapMethod.h:151: /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: by ‘virtual void CLyapWolfMethod::start()’ 203 | virtual void start(/*const CState * initialState*/); | ^~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/lyap/CLyapWolfMethod.h:203:16: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunction; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/sbml/SBMLImporter.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiTaskTypes.h:99: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupDM.cpp [ 91%] Linking CXX executable CopasiSBW cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiSBW.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread -rdynamic CMakeFiles/CopasiSBW.dir/SBWTranslator.cpp.o -o CopasiSBW ../libCOPASISE.a //usr/lib64/libSBW.so -lpthread -lz /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat -lcrossguid2 -luuid /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so -lflexiblas -lz [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterGroupView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterGroupView.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterOverviewWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterOverviewWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterResultItemModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterResultItemModel.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQParameterSetsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQParameterSetsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotDM.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPlotsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPlotsWidget.cpp [ 91%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPreferenceDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPreferenceDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemBar.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemBar.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQProgressItemText.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQProgressItemText.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQPushButtonDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQPushButtonDelegate.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReactionsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReactionsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDM.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinition.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinition.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportDefinitionSelect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportDefinitionSelect.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportListItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportListItem.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQReportsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQReportsWidget.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSBMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSBMLFileDialog.cpp [ 92%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLFileDialog.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSEDMLImportDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSEDMLImportDialog.h:12, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSEDMLImportDialog.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h: In member function ‘void Ui_CQSEDMLImportDialog::setupUi(QDialog*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:18: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSEDMLImportDialog.h:97:57: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 97 | cbmReportSelect->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScanWidgetParameterSet.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiProblem.h:39, from /builddir/build/BUILD/COPASI-Build-284/copasi/scan/CScanProblem.h:34, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CScanItemData.h:15, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQScanWidgetParameterSet.h:14, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScanWidgetParameterSet.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:212:31: warning: ‘virtual const std::string& CCopasiParameter::getKey() const’ was hidden [-Woverloaded-virtual=] 212 | virtual const std::string & getKey() const override; | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameterGroup.h:456:15: note: by ‘CCopasiParameterGroup::getKey’ 456 | std::string getKey(const size_t & index) const; | ^~~~~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQScrolledDependenciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQScrolledDependenciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSensResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSensResultWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSimpleSelectionTree.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSimpleSelectionTree.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSortFilterProxyModel.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSortFilterProxyModel.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpecieDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpecieDM.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQSpeciesDetail.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQSpeciesDetail.h:21, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesDetail.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpeciesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpeciesWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSpinBoxDelegate.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSpinBoxDelegate.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSplashWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSplashWidget.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQStartValueReset.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQStartValueReset.cpp [ 93%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQSteadyStateResult.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQSteadyStateResult.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultSubWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultSubWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAResultWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAResultWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSATimeScaleWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSATimeScaleWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTSSAWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTSSAWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTabWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTabWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableView.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTableWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTableWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskBtnWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskBtnWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskHeaderWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskHeaderWidget.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskMethodWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskMethodWidget.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTaskThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTaskThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTextDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTextDialog.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQThread.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQThread.cpp [ 94%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSensWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSensWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTimeSeriesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTimeSeriesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQTrajectoryWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQTrajectoryWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUndoTester.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUndoTester.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDM.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitDetail.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitDetail.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUnitsWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUnitsWidget.cpp In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdateAvogadro.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdateAvogadro.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQUpdatesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQUpdatesWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidator.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CQValidatorUnit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CQValidatorUnit.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanContainerWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanContainerWidget.cpp [ 95%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanItemData.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanItemData.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRandom.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRandom.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetRepeat.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetRepeat.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetScan.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetScan.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CScanWidgetTask.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CScanWidgetTask.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CUpDownSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CUpDownSubwidget.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CWindowInterface.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CWindowInterface.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ChemEqValidator.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ChemEqValidator.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiFileDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiFileDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiGuiTypes.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiGuiTypes.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_CopasiSlider.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_CopasiSlider.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DataModelGUI.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DataModelGUI.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_DefaultplotDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_DefaultplotDialog.cpp [ 96%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_FunctionWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_FunctionWidget1.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/FunctionWidget1.h:28, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_FunctionWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_MyLineEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_MyLineEdit.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserItem.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ObjectBrowserWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ObjectBrowserWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ReactionsWidget1.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CExpression.h:33, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:40, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_CQExpressionMmlStackedWidget.h:24, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionMmlStackedWidget.h:26, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:31, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ReactionsWidget1.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ReactionsWidget1.cpp:10: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:852:18: warning: ‘size_t CDataVector::getIndex(const CDataObject*) const [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 852 | virtual size_t getIndex(const CDataObject * pObject) const | ^~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1359:18: note: by ‘size_t CDataVectorN::getIndex(const std::string&) const [with CType = CFunctionParameter; size_t = long unsigned int; std::string = std::__cxx11::basic_string]’ 1359 | virtual size_t getIndex(const std::string &name) const | ^~~~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/utilities/CCopasiParameter.h:32, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//qtUtilities.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI//CQValidator.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQExpressionWidget.h:37: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h: In member function ‘void Ui_ReactionsWidget1::setupUi(CopasiWidget*)’: /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/qt5/QtWidgets/QComboBox:1, from /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:19: /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/ui_ReactionsWidget1.h:103:54: warning: ‘QComboBox::AdjustToMinimumContentsLength’ is deprecated: Use AdjustToContents or AdjustToContentsOnFirstShow [-Wdeprecated-declarations] 103 | mpCmbRateLaw->setSizeAdjustPolicy(QComboBox::AdjustToMinimumContentsLength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/qt5/QtWidgets/qcombobox.h:141:9: note: declared here 141 | AdjustToMinimumContentsLength Q_DECL_ENUMERATOR_DEPRECATED_X( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_ScanWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_ScanWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensWidgetComboBox.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensWidgetComboBox.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SensitivitiesWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SensitivitiesWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SliderSettingsDialog.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SliderSettingsDialog.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_StateSubwidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_StateSubwidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_SteadyStateWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_SteadyStateWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_TaskWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_TaskWidget.cpp [ 97%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiWidget.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiWidget.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_copasiui3window.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_copasiui3window.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_listviews.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_listviews.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_objectdebug.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_objectdebug.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_parametertable.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_parametertable.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -MF CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/UI/moc_qtUtilities.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/UI/moc_qtUtilities.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -MF CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/resourcesUI/moc_CQIconResource.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/resourcesUI/moc_CQIconResource.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -MF CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/wizard/moc_wizard.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/wizard/moc_wizard.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationControls.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationControls.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationSettingsEditor.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationSettingsEditor.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQAnimationWindow.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQAnimationWindow.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQConnectionGraphicsItem.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiAnimation.cpp [ 98%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiEffect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQCopasiGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescription.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQEffectDescriptionEdit.cpp /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQElementProperties.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLabelGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutScene.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQLayoutView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRenderConverter.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQRoundedRect.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQStyledGraphicsItem.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -MF CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/moc_CQZoomableView.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o -MF CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o.d -o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/undoUI/moc_CQUndoDM.cpp [ 99%] Building CXX object copasi/CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now 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CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQConnectionGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiAnimation.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiEffect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQCopasiGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescription.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQEffectDescriptionEdit.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQElementProperties.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLabelGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutScene.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQLayoutView.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRenderConverter.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQRoundedRect.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQStyledGraphicsItem.cpp.o CMakeFiles/libCOPASIUI.dir/qlayout/moc_CQZoomableView.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDM.cpp.o CMakeFiles/libCOPASIUI.dir/undoUI/moc_CQUndoDialog.cpp.o /usr/bin/ranlib libCOPASIUI.a gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target libCOPASIUI /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' cd /builddir/build/BUILD/COPASI-Build-284 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284 /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/CMakeFiles/CopasiUI.dir/DependInfo.cmake "--color=" gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/gmake -f copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build.make copasi/CopasiUI/CMakeFiles/CopasiUI.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Building CXX object copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/g++ -DHAVE_F2C_H -DLINUX -DLinux -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DATAVISUALIZATION_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_PRINTSUPPORT_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/usr/include/crossguid2 -I/builddir/build/BUILD/COPASI-Build-284 -I/builddir/build/BUILD/COPASI-Build-284/-I/usr/include/numl -I/usr/include/qt5/libmml-qt5 -I/usr/include/qt5/qwt -I/builddir/build/BUILD/COPASI-Build-284/copasi/barChart -I/builddir/build/BUILD/COPASI-Build-284/copasi/layoutUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/MIRIAMUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/plotUI -I/builddir/build/BUILD/COPASI-Build-284/copasi/tex -I/builddir/build/BUILD/COPASI-Build-284/copasi/UI -I/builddir/build/BUILD/COPASI-Build-284/copasi/wizard -I/builddir/build/BUILD/COPASI-Build-284/copasi/qlayout -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoFramework -I/builddir/build/BUILD/COPASI-Build-284/copasi/undoUI -I/builddir/build/BUILD/COPASI-Build-284/copasi -isystem /usr/include/sbml -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtConcurrent -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtPrintSupport -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtXml -isystem /usr/include/qt5/QtDataVisualization -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -std=gnu++17 -fPIC -MD -MT copasi/CopasiUI/CMakeFiles/CopasiUI.dir/main.cpp.o -MF CMakeFiles/CopasiUI.dir/main.cpp.o.d -o CMakeFiles/CopasiUI.dir/main.cpp.o -c /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:36, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CCallParameters.h:37, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNodeCall.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationNode.h:621, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CEvaluationTree.h:30, from /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:35, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:44: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1417:32: required from ‘class CDataVectorNS’ 1417 | template < class CType > class CDataVectorNS: public CDataVectorN < CType > | ^~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:51:39: required from here 51 | CDataVectorNS< CFunctionParameter > mParameters; | ^~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunctionParameter]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunctionParameter; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunctionParameter; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ In file included from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiDataModel/CDataModel.h:18, from /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI/main.cpp:42: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:123:16: warning: ‘virtual bool CDataContainer::remove(CDataObject*)’ was hidden [-Woverloaded-virtual=] 123 | virtual bool remove(CDataObject * pObject); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:123:8: note: by ‘void CFunctionParameters::remove(const std::string&)’ 123 | void remove(const std::string & name); | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: by ‘CFunctionParameters::add’ 115 | bool add(const std::string & name, | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h: In instantiation of ‘class CDataVectorN’: /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:59:30: required from here /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: 59 | CDataVectorN < CFunction > mLoadedFunctions; /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionParameters.h:115:8: note: | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:698:16: warning: ‘bool CDataVector::remove(CDataObject*) [with CType = CFunction]’ was hidden [-Woverloaded-virtual=] 698 | virtual bool remove(CDataObject * pObject) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:671:16: warning: ‘void CDataVector::remove(const size_t&) [with CType = CFunction; size_t = long unsigned int]’ was hidden [-Woverloaded-virtual=] 671 | virtual void remove(const size_t & index) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataVector.h:1249:16: note: by ‘void CDataVectorN::remove(const std::string&) [with CType = CFunction; std::string = std::__cxx11::basic_string]’ 1249 | virtual void remove(const std::string & name) | ^~~~~~ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CDataContainer.h:116:16: warning: ‘virtual bool CDataContainer::add(CDataObject*, const bool&)’ was hidden [-Woverloaded-virtual=] 116 | virtual bool add(CDataObject * pObject, const bool & adopt = true); | ^~~ /builddir/build/BUILD/COPASI-Build-284/copasi/function/CFunctionDB.h:127:8: note: by ‘bool CFunctionDB::add(CFunction*, const bool&)’ 127 | bool add(CFunction * pFunction, const bool & adopt); | ^~~ [100%] Linking CXX executable CopasiUI cd /builddir/build/BUILD/COPASI-Build-284/copasi/CopasiUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopasiUI.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -fno-strict-aliasing -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/builddir/build/BUILD/COPASI-Build-284/copasi/lapack -I/builddir/build/BUILD/COPASI-Build-284/copasi/CopasiSBW -I/usr/include/flexiblas -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -pthread CMakeFiles/CopasiUI.dir/main.cpp.o -o CopasiUI ../libCOPASIUI.a /usr/lib64/libQt5Concurrent.so.5.15.12 /usr/lib64/libQt5Network.so.5.15.12 /usr/lib64/libQt5OpenGL.so.5.15.12 /usr/lib64/libQt5PrintSupport.so.5.15.12 /usr/lib64/libQt5Svg.so.5.15.12 /usr/lib64/libQt5Widgets.so.5.15.12 /usr/lib64/libQt5Xml.so.5.15.12 /usr/lib64/libQt5DataVisualization.so.5.15.12 /usr/lib64/libQt5Gui.so.5.15.12 /usr/lib64/libQt5Core.so.5.15.12 ../libCOPASISE.a /lib64/libsedml.so /usr/lib64/libCombine.so.0.2.20 -lz -lZipper -lnuml -lxml2 -lbz2 -lz -lZipper -lnuml -lxml2 -lbz2 -lm -ldl -lexpat /lib64/libcrossguid2.so /usr/lib64/libuuid.so /usr/lib64/libraptor.so /usr/lib64/libsbml.so /usr/lib64/libexpat.so /usr/lib64/libflexiblas.so /usr/lib64/libqwt-qt5.so /usr/lib64/libmml.so /usr/lib64/libqcustomplot-qt5.so /usr/lib64/libGL.so /usr/lib64/libGLU.so //usr/lib64/libSBW.so /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: warning: type ‘struct CQMmlScrollView’ violates the C++ One Definition Rule [-Wodr] 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a different type is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:51:16: note: the first difference of corresponding definitions is field ‘mpMmlWidget’ 51 | QtMmlWidget* mpMmlWidget; | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:40:7: note: a type with different number of fields is defined in another translation unit 40 | class CQMmlScrollView : public QScrollArea | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_del ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_del ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.h:46:3: warning: type of ‘__dt_comp ’ does not match original declaration [-Wlto-type-mismatch] 46 | ~CQMmlScrollView(); | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: ‘__dt_comp ’ was previously declared here 57 | CQMmlScrollView::~CQMmlScrollView() | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/UI/CQMmlScrollView.cpp:57:1: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used In member function ‘resize’, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:333:11, inlined from ‘removeAnalysisEvent.isra’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:4483:77: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘removeAnalysisEvent.isra’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize.constprop’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘intialize’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target CopasiSBW In member function ‘resize’, inlined from ‘copy’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:478:19, inlined from ‘__ct ’ at /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:343:9, inlined from ‘intialize’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:100:74, inlined from ‘start’ at /builddir/build/BUILD/COPASI-Build-284/copasi/trajectory/CTrajectoryMethodDsaLsodar.cpp:523:23: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new: In member function ‘start’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘deallocate’, inlined from ‘deallocate’ at /usr/include/c++/14/bits/alloc_traits.h:510:0, inlined from ‘_M_deallocate’ at /usr/include/c++/14/bits/stl_vector.h:386:0, inlined from ‘_M_deallocate’ at /usr/include/c++/14/bits/stl_vector.h:382:7, inlined from ‘__dt_base ’ at /usr/include/c++/14/bits/stl_vector.h:365:0, inlined from ‘__dt_base ’ at /usr/include/c++/14/bits/stl_vector.h:735:7, inlined from ‘fillItemFromCurve’ at /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:418:35, inlined from ‘_Z17fillItemFromGroupP18QGraphicsItemGroupPK13CLBoundingBoxPK7CLGroupPK16CLRenderResolver.part.0’ at /builddir/build/BUILD/COPASI-Build-284/copasi/qlayout/CQRenderConverter.cpp:1043:28: /usr/include/c++/14/bits/new_allocator.h:172: warning: ‘operator delete’ called on pointer ‘D.25345.D.6649._M_impl.D.6643._M_finish’ with nonzero offset 64 [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h: In member function ‘resize’: /builddir/build/BUILD/COPASI-Build-284/copasi/core/CVector.h:438:50: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 438 | CVectorCore< CType >::mpBuffer = new CType[CVectorCore< CType >::mSize]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5404:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5407:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ In member function ‘relocateVector’, inlined from ‘relocate’ at /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.cpp:5410:17: /builddir/build/BUILD/COPASI-Build-284/copasi/math/CMathContainer.h:103:46: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 103 | vector.initialize(size, (size > 0) ? new CType[size] : NULL); | ^ /usr/include/c++/14/new: In member function ‘relocate’: /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp: In function ‘init’: /builddir/build/BUILD/COPASI-Build-284/copasi/commandline/COptions.cpp:73:44: warning: argument 1 value ‘18446744073709551615’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 73 | std::string * Utf8 = new std::string[argc]; | ^ /usr/include/c++/14/new:133:26: note: in a call to allocation function ‘operator new []’ declared here 133 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc) | ^ gmake[2]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' [100%] Built target CopasiUI gmake[1]: Leaving directory '/builddir/build/BUILD/COPASI-Build-284' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/COPASI-Build-284/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BboehL + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x '!=' / ']' + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x ++ dirname /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + DESTDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x + /usr/bin/cmake --install . -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/_COPASI.so -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi.pth -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/COPASI.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/add_optitems.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/checkModel.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/custom_output.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example1.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example2.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example3.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example4.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example5.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example6.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example7.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example8.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/example9.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/get_steady_state.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/print_model_parameterset.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/process_callback.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/remove_reaction.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/remove_unused_elements.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/restore_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/run_mca.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/setup_sensitivities.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/to_local_parameters.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples/write_ids_to_names.py -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/bin/CopasiSE -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/bin/CopasiUI -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/bin/CopasiSBW -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step1.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step2.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step3.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step4.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step5.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/TutWiz-Step6.html -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ModelSettingsDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/NewPlotAdded.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ObjectBrowserSelection.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ObjectBrowserTree.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/OutputAssistant.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/PlotCurveSelectionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/PlotDefinition.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/PlotWindow.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ReactionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ReactionOverview.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ReactionOverviewEmpty.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/ReportDefinitionDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/doc/html/figures/TimeCourseDialog.png -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/CircadianClock.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/DimericMWC-stiff.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/Genetic-2000Elo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/MAPK-HF96-layout.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/Metabolism-2000Poo.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/NF-kappaB-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/NF-kappaB.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/NF-kappaB.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/Olsen2003_peroxidase.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/YeastGlycolysis.gps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/brusselator-model.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/brusselator.cps -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/brusselator.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/oscli.xml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/examples/scan.sedml -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/icons/copasi/icons/Copasi.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/icons/copasi/icons/CopasiDoc.ico -- Installing: /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/copasi/config/MIRIAMResources.xml + rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12/site-packages/copasi/examples + install -pm 644 copasi/UI/icons/Copasi48-Alpha.xpm /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/icons/copasi/icons + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/applications + cat + mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/metainfo + install -pm 644 /builddir/build/SOURCES/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/metainfo/ + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 4.42.284-5.fc40 --unique-debug-suffix -4.42.284-5.fc40.s390x --unique-debug-src-base COPASI-4.42.284-5.fc40.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/COPASI-Build-284 find-debuginfo: starting Extracting debug info from 4 files DWARF-compressing 4 files sepdebugcrcfix: Updated 4 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/COPASI-4.42.284-5.fc40.s390x cpio: copasi/CChemEqParser.ypp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CChemEqParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser.ypp: Cannot stat: No such file or directory cpio: copasi/CEvaluationParser_yacc.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser.ypp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_lex.cpp: Cannot stat: No such file or directory cpio: copasi/CUnitParser_yacc.cpp: Cannot stat: No such file or directory 61495 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/src/debug/COPASI-4.42.284-5.fc40.s390x/copasi/odepack++/CRadau5.h is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.RrvKiJ + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd COPASI-Build-284 + desktop-file-validate /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/applications/COPASI.desktop + appstream-util validate-relax --nonet /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/metainfo/COPASI.appdata.xml /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/metainfo/COPASI.appdata.xml: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: COPASI-4.42.284-5.fc40.s390x Provides: COPASI = 4.42.284-5.fc40 COPASI(s390-64) = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Obsoletes: COPASI-sharp < 0:4.25.213-1 R-COPASI < 0:4.25.213-1 perl-COPASI < 0:4.25.213-1 Processing files: COPASI-gui-4.42.284-5.fc40.s390x Provides: COPASI-gui = 4.42.284-5.fc40 COPASI-gui(s390-64) = 4.42.284-5.fc40 application() application(COPASI.desktop) metainfo() metainfo(COPASI.appdata.xml) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5DataVisualization.so.5()(64bit) libQt5DataVisualization.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5PrintSupport.so.5()(64bit) libQt5PrintSupport.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libQt5Xml.so.5()(64bit) libQt5Xml.so.5(Qt_5)(64bit) libSBW.so.2.12()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libmml.so.2()(64bit) libqcustomplot-qt5.so.2()(64bit) libqwt-qt5.so.6.2()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: COPASI-data-4.42.284-5.fc40.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.w8Qd91 + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-data = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-COPASI-4.42.284-5.fc40.s390x Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.9fTmAF + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-COPASI = 4.42.284-5.fc40 python3-COPASI = 4.42.284-5.fc40 python3-COPASI(s390-64) = 4.42.284-5.fc40 python3.12-COPASI = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libCombine.so.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcrossguid2.so.0()(64bit) libexpat.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libpython3.12.so.1.0()(64bit) libraptor.so.1()(64bit) libsbml.so.5()(64bit) libsedml.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.12 rtld(GNU_HASH) Obsoletes: python-COPASI < 4.42.284-5.fc40 python2-COPASI < 0:4.25.213-1 Processing files: COPASI-doc-4.42.284-5.fc40.noarch Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.H0GC4I + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + LICENSEDIR=/builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + cp -pr /builddir/build/BUILD/COPASI-Build-284/copasi/ArtisticLicense.txt /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x/usr/share/licenses/COPASI + RPM_EC=0 ++ jobs -p + exit 0 Provides: COPASI-doc = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debugsource-4.42.284-5.fc40.s390x Provides: COPASI-debugsource = 4.42.284-5.fc40 COPASI-debugsource(s390-64) = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: COPASI-debuginfo-4.42.284-5.fc40.s390x Provides: COPASI-debuginfo = 4.42.284-5.fc40 COPASI-debuginfo(s390-64) = 4.42.284-5.fc40 debuginfo(build-id) = fd84e806c0cd2a9ab34451725625cd80a43d9446 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(s390-64) = 4.42.284-5.fc40 Processing files: COPASI-gui-debuginfo-4.42.284-5.fc40.s390x Provides: COPASI-gui-debuginfo = 4.42.284-5.fc40 COPASI-gui-debuginfo(s390-64) = 4.42.284-5.fc40 debuginfo(build-id) = 3a1b29a594a9f04d1dda11851e17035fbb0f392d debuginfo(build-id) = 8cc0dbb82ecc21068bdb163871dae6491a7e0ec5 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(s390-64) = 4.42.284-5.fc40 Processing files: python3-COPASI-debuginfo-4.42.284-5.fc40.s390x Provides: debuginfo(build-id) = 80cdbb045f813cef5b711e7d0fc2909f038572ab python-COPASI-debuginfo = 4.42.284-5.fc40 python3-COPASI-debuginfo = 4.42.284-5.fc40 python3-COPASI-debuginfo(s390-64) = 4.42.284-5.fc40 python3.12-COPASI-debuginfo = 4.42.284-5.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: COPASI-debugsource(s390-64) = 4.42.284-5.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x Wrote: /builddir/build/RPMS/python3-COPASI-debuginfo-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-gui-debuginfo-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-debuginfo-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-gui-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-debugsource-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-4.42.284-5.fc40.s390x.rpm Wrote: /builddir/build/RPMS/COPASI-data-4.42.284-5.fc40.noarch.rpm Wrote: /builddir/build/RPMS/COPASI-doc-4.42.284-5.fc40.noarch.rpm Wrote: /builddir/build/RPMS/python3-COPASI-4.42.284-5.fc40.s390x.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.pjHQ3A + umask 022 + cd /builddir/build/BUILD + cd COPASI-Build-284 + /usr/bin/rm -rf /builddir/build/BUILDROOT/COPASI-4.42.284-5.fc40.s390x + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Ju7GX7 + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/COPASI-Build-284-SPECPARTS + rm -rf COPASI-Build-284 COPASI-Build-284.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild COPASI-4.42.284-5.fc40.src.rpm Finish: build phase for COPASI-4.42.284-5.fc40.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1705987227.553682/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/COPASI-4.42.284-5.fc40.src.rpm) Config(child) 31 minutes 58 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "COPASI-data", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "noarch" }, { "name": "python3-COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "COPASI-doc", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "noarch" }, { "name": "COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "COPASI-gui", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "COPASI", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "src" }, { "name": "COPASI-gui-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "python3-COPASI-debuginfo", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" }, { "name": "COPASI-debugsource", "epoch": null, "version": "4.42.284", "release": "5.fc40", "arch": "s390x" } ] } RPMResults finished