Warning: Permanently added '150.239.84.66' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/7353805-fedora-39-s390x --chroot fedora-39-s390x Version: 0.72 PID: 6468 Logging PID: 6469 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 7353805, 'buildroot_pkgs': [], 'chroot': 'fedora-39-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': 'c28352c5a5140eb383b20faf0daa76805b79a767', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-affyio', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-affyio', 'package_version': '1.66.0-7', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-39-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/iucar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'submitter': 'https://src.fedoraproject.org/user/iucar', 'tags': [], 'task_id': '7353805-fedora-39-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-affyio /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-affyio', '/var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio'... Running: git checkout c28352c5a5140eb383b20faf0daa76805b79a767 -- cmd: ['git', 'checkout', 'c28352c5a5140eb383b20faf0daa76805b79a767', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio rc: 0 stdout: stderr: Note: switching to 'c28352c5a5140eb383b20faf0daa76805b79a767'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at c28352c automatic import of R-affyio Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading affyio_1.66.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o affyio_1.66.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-affyio/affyio_1.66.0.tar.gz/md5/d61dec136e65390fdd17c1245cb9b21f/affyio_1.66.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 107k 100 107k 0 0 21801 0 0:00:05 0:00:05 --:--:-- 23046 INFO: Reading stdout from command: md5sum affyio_1.66.0.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio/R-affyio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714080096.984571 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio/R-affyio.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714080096.984571 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio/R-affyio.spec) Config(fedora-39-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1714080096.984571/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-s390x-bootstrap-1714080096.984571/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/9a7c44e3e571fdcd700f8fb602facd8774057a73b1846cd86ef57f6ea69e7557/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/9a7c44e3e571fdcd700f8fb602facd8774057a73b1846cd86ef57f6ea69e7557/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 3.0 MB/s | 15 MB 00:05 Additional repo http_kojipkgs_fedoraproject_org 12 MB/s | 68 MB 00:05 fedora 66 MB/s | 79 MB 00:01 updates 2.4 MB/s | 28 MB 00:11 Last metadata expiration check: 0:00:03 ago on Thu Apr 25 21:23:01 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: python3-dnf-plugins-core noarch 4.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 491 k dnf-data noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k python3-dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 553 k yum noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs s390x 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 159 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus s390x 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 146 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd s390x 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k Transaction Summary ========================================================================================================================= Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dbus-1.3.2-6.fc40.s390x.rpm 29 kB/s | 146 kB 00:05 (2/11): dbus-libs-1.14.10-3.fc40.s390x.rpm 31 kB/s | 159 kB 00:05 (3/11): python3-distro-1.9.0-3.fc40.noarch.rpm 9.5 MB/s | 45 kB 00:00 (4/11): python3-dnf-plugins-core-4.6.0-1.fc41.n 37 MB/s | 302 kB 00:00 (5/11): python3-six-1.16.0-14.fc40.noarch.rpm 8.9 MB/s | 41 kB 00:00 (6/11): python3-dateutil-2.8.2-13.fc40.noarch.r 68 kB/s | 345 kB 00:05 (7/11): python3-systemd-235-9.fc40.s390x.rpm 9.3 MB/s | 100 kB 00:00 (8/11): dnf-data-4.19.2-1.fc41.noarch.rpm 6.1 MB/s | 40 kB 00:00 (9/11): dnf-4.19.2-1.fc41.noarch.rpm 39 MB/s | 491 kB 00:00 (10/11): yum-4.19.2-1.fc41.noarch.rpm 8.3 MB/s | 37 kB 00:00 (11/11): python3-dnf-4.19.2-1.fc41.noarch.rpm 22 MB/s | 553 kB 00:00 -------------------------------------------------------------------------------- Total 444 kB/s | 2.2 MB 00:05 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.19.2-1.fc41.noarch 1/15 Upgrading : python3-dnf-4.19.2-1.fc41.noarch 2/15 Upgrading : dnf-4.19.2-1.fc41.noarch 3/15 Running scriptlet: dnf-4.19.2-1.fc41.noarch 3/15 Installing : python3-systemd-235-9.fc40.s390x 4/15 Installing : python3-six-1.16.0-14.fc40.noarch 5/15 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 6/15 Installing : python3-distro-1.9.0-3.fc40.noarch 7/15 Installing : dbus-libs-1:1.14.10-3.fc40.s390x 8/15 Installing : python3-dbus-1.3.2-6.fc40.s390x 9/15 Installing : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 10/15 Upgrading : yum-4.19.2-1.fc41.noarch 11/15 Cleanup : yum-4.19.2-1.fc39.noarch 12/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : dnf-4.19.2-1.fc39.noarch 13/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 14/15 Cleanup : dnf-data-4.19.2-1.fc39.noarch 15/15 Running scriptlet: dnf-data-4.19.2-1.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-3.fc40.s390x 1/15 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-6.fc40.s390x 3/15 Verifying : python3-distro-1.9.0-3.fc40.noarch 4/15 Verifying : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 5/15 Verifying : python3-six-1.16.0-14.fc40.noarch 6/15 Verifying : python3-systemd-235-9.fc40.s390x 7/15 Verifying : dnf-4.19.2-1.fc41.noarch 8/15 Verifying : dnf-4.19.2-1.fc39.noarch 9/15 Verifying : dnf-data-4.19.2-1.fc41.noarch 10/15 Verifying : dnf-data-4.19.2-1.fc39.noarch 11/15 Verifying : python3-dnf-4.19.2-1.fc41.noarch 12/15 Verifying : python3-dnf-4.19.2-1.fc39.noarch 13/15 Verifying : yum-4.19.2-1.fc41.noarch 14/15 Verifying : yum-4.19.2-1.fc39.noarch 15/15 Upgraded: dnf-4.19.2-1.fc41.noarch dnf-data-4.19.2-1.fc41.noarch python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.s390x python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.s390x python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.s390x Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1714080096.984571/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.s390x rpm-sequoia-1.6.0-1.fc39.s390x python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 1.5 MB/s | 15 MB 00:10 Additional repo http_kojipkgs_fedoraproject_org 13 MB/s | 68 MB 00:05 fedora 6.1 MB/s | 79 MB 00:13 updates 2.3 MB/s | 28 MB 00:12 Last metadata expiration check: 0:00:08 ago on Thu Apr 25 21:24:55 2024. Dependencies resolved. ======================================================================================================================================== Package Arch Version Repository Size ======================================================================================================================================== Installing group/module packages: bash s390x 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 s390x 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53 k coreutils s390x 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M cpio s390x 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 291 k diffutils s390x 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 412 k fedora-release-common noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils s390x 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 493 k gawk s390x 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack s390x 2.39.9000-14.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 109 k grep s390x 3.11-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 297 k gzip s390x 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 171 k info s390x 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 195 k patch s390x 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k redhat-rpm-config noarch 288-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build s390x 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 71 k sed s390x 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 312 k shadow-utils s390x 2:4.15.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar s390x 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 871 k unzip s390x 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 195 k util-linux s390x 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M which s390x 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k xz s390x 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 533 k Installing dependencies: alternatives s390x 1.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs s390x 4.0.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 129 k authselect s390x 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k authselect-libs s390x 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 204 k basesystem noarch 11-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k binutils s390x 2.42.50-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.0 M binutils-gold s390x 2.42.50-6.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 998 k bzip2-libs s390x 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 47 k ca-certificates noarch 2023.2.62_v7.0.401-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 862 k coreutils-common s390x 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M cracklib s390x 2.9.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 84 k crypto-policies noarch 20240320-1.git58e3d95.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65 k curl s390x 8.7.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309 k cyrus-sasl-lib s390x 2.1.28-19.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 821 k debugedit s390x 5.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 82 k dwz s390x 0.15-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145 k ed s390x 1.20.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83 k efi-srpm-macros noarch 5-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k elfutils s390x 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 582 k elfutils-debuginfod-client s390x 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k elfutils-default-yama-scope noarch 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k elfutils-libelf s390x 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 214 k elfutils-libs s390x 0.191-7.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 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util-linux-core s390x 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 526 k xxhash-libs s390x 0.8.2-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 36 k xz-libs s390x 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116 k zig-srpm-macros noarch 1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 8.0 k zip s390x 3.0-40.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 283 k zlib-ng-compat s390x 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 66 k zstd s390x 1.5.6-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 516 k Installing Groups: Buildsystem building group Transaction Summary ======================================================================================================================================== Install 153 Packages Total download size: 53 M Installed size: 182 M Downloading Packages: (1/153): 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fedora-gpg-keys-41-0.1.noarch.rpm 18 MB/s | 121 kB 00:00 (32/153): fedora-release-41-0.9.noarch.rpm 2.6 MB/s | 11 kB 00:00 (33/153): fedora-release-common-41-0.9.noarch.r 5.5 MB/s | 22 kB 00:00 (34/153): fedora-repos-41-0.1.noarch.rpm 2.9 MB/s | 9.3 kB 00:00 (35/153): fedora-release-identity-basic-41-0.9. 2.4 MB/s | 12 kB 00:00 (36/153): fedora-repos-rawhide-41-0.1.noarch.rp 2.3 MB/s | 8.9 kB 00:00 (37/153): file-5.45-5.fc41.s390x.rpm 9.9 MB/s | 49 kB 00:00 (38/153): file-libs-5.45-5.fc41.s390x.rpm 46 MB/s | 770 kB 00:00 (39/153): findutils-4.9.0-8.fc40.s390x.rpm 37 MB/s | 493 kB 00:00 (40/153): filesystem-3.18-9.fc41.s390x.rpm 58 MB/s | 1.1 MB 00:00 (41/153): forge-srpm-macros-0.3.1-1.fc41.noarch 5.5 MB/s | 19 kB 00:00 (42/153): fonts-srpm-macros-2.0.5-14.fc40.noarc 5.9 MB/s | 27 kB 00:00 (43/153): fpc-srpm-macros-1.3-12.fc40.noarch.rp 1.8 MB/s | 7.8 kB 00:00 (44/153): gdbm-1.23-6.fc40.s390x.rpm 17 MB/s | 152 kB 00:00 (45/153): gdbm-libs-1.23-6.fc40.s390x.rpm 11 MB/s | 58 kB 00:00 (46/153): ghc-srpm-macros-1.9.1-1.fc41.noarch.r 1.4 MB/s | 9.0 kB 00:00 (47/153): gawk-5.3.0-3.fc40.s390x.rpm 51 MB/s | 1.1 MB 00:00 (48/153): glibc-common-2.39.9000-14.fc41.s390x. 44 MB/s | 408 kB 00:00 (49/153): glibc-minimal-langpack-2.39.9000-14.f 22 MB/s | 109 kB 00:00 (50/153): gmp-6.3.0-1.fc41.s390x.rpm 36 MB/s | 329 kB 00:00 (51/153): glibc-2.39.9000-14.fc41.s390x.rpm 57 MB/s | 1.9 MB 00:00 (52/153): gnat-srpm-macros-6-5.fc40.noarch.rpm 1.6 MB/s | 8.8 kB 00:00 (53/153): go-srpm-macros-3.6.0-1.fc41.noarch.rp 6.6 MB/s | 28 kB 00:00 (54/153): glibc-gconv-extra-2.39.9000-14.fc41.s 56 MB/s | 1.7 MB 00:00 (55/153): gzip-1.13-1.fc40.s390x.rpm 28 MB/s | 171 kB 00:00 (56/153): grep-3.11-7.fc40.s390x.rpm 23 MB/s | 297 kB 00:00 (57/153): info-7.1-2.fc40.s390x.rpm 24 MB/s | 195 kB 00:00 (58/153): jansson-2.13.1-9.fc40.s390x.rpm 5.9 MB/s | 45 kB 00:00 (59/153): kernel-srpm-macros-1.0-23.fc41.noarch 2.5 MB/s | 9.8 kB 00:00 (60/153): keyutils-libs-1.6.3-3.fc40.s390x.rpm 7.2 MB/s | 31 kB 00:00 (61/153): libacl-2.3.2-1.fc40.s390x.rpm 4.9 MB/s | 25 kB 00:00 (62/153): libattr-2.5.2-3.fc40.s390x.rpm 4.5 MB/s | 18 kB 00:00 (63/153): krb5-libs-1.21.2-5.fc40.s390x.rpm 62 MB/s | 781 kB 00:00 (64/153): libarchive-3.7.2-3.fc41.s390x.rpm 39 MB/s | 440 kB 00:00 (65/153): libblkid-2.40-13.fc41.s390x.rpm 18 MB/s | 130 kB 00:00 (66/153): libcap-2.69-8.fc41.s390x.rpm 18 MB/s | 88 kB 00:00 (67/153): libbrotli-1.1.0-3.fc40.s390x.rpm 43 MB/s | 387 kB 00:00 (68/153): libcom_err-1.47.0-5.fc40.s390x.rpm 7.1 MB/s | 25 kB 00:00 (69/153): libcap-ng-0.8.5-1.fc41.s390x.rpm 8.0 MB/s | 33 kB 00:00 (70/153): libcurl-8.7.1-1.fc41.s390x.rpm 50 MB/s | 371 kB 00:00 (71/153): libevent-2.1.12-12.fc40.s390x.rpm 41 MB/s | 260 kB 00:00 (72/153): libeconf-0.6.2-1.fc41.s390x.rpm 3.9 MB/s | 34 kB 00:00 (73/153): libffi-3.4.6-1.fc41.s390x.rpm 7.1 MB/s | 36 kB 00:00 (74/153): libgcc-14.0.1-0.15.fc41.s390x.rpm 16 MB/s | 83 kB 00:00 (75/153): libfdisk-2.40-13.fc41.s390x.rpm 18 MB/s | 165 kB 00:00 (76/153): libgomp-14.0.1-0.15.fc41.s390x.rpm 53 MB/s | 349 kB 00:00 (77/153): libidn2-2.3.7-1.fc40.s390x.rpm 21 MB/s | 113 kB 00:00 (78/153): libmount-2.40-13.fc41.s390x.rpm 26 MB/s | 159 kB 00:00 (79/153): libnghttp2-1.61.0-1.fc41.s390x.rpm 18 MB/s | 80 kB 00:00 (80/153): libpkgconf-2.1.0-1.fc40.s390x.rpm 7.4 MB/s | 39 kB 00:00 (81/153): libnsl2-2.0.1-1.fc40.s390x.rpm 4.2 MB/s | 29 kB 00:00 (82/153): libpsl-0.21.5-3.fc40.s390x.rpm 11 MB/s | 64 kB 00:00 (83/153): libselinux-3.6-4.fc40.s390x.rpm 20 MB/s | 92 kB 00:00 (84/153): libpwquality-1.4.5-9.fc40.s390x.rpm 19 MB/s | 109 kB 00:00 (85/153): libsemanage-3.6-3.fc40.s390x.rpm 24 MB/s | 120 kB 00:00 (86/153): libsmartcols-2.40-13.fc41.s390x.rpm 20 MB/s | 86 kB 00:00 (87/153): libsepol-3.6-3.fc40.s390x.rpm 40 MB/s | 349 kB 00:00 (88/153): libssh-config-0.10.6-6.fc41.noarch.rp 2.5 MB/s | 9.1 kB 00:00 (89/153): libssh-0.10.6-6.fc41.s390x.rpm 32 MB/s | 211 kB 00:00 (90/153): libtirpc-1.3.4-1.rc3.fc41.s390x.rpm 16 MB/s | 95 kB 00:00 (91/153): libtasn1-4.19.0-6.fc40.s390x.rpm 9.8 MB/s | 78 kB 00:00 (92/153): libtool-ltdl-2.4.7-10.fc40.s390x.rpm 7.8 MB/s | 37 kB 00:00 (93/153): libutempter-1.2.1-13.fc40.s390x.rpm 3.9 MB/s | 26 kB 00:00 (94/153): libstdc++-14.0.1-0.15.fc41.s390x.rpm 50 MB/s | 983 kB 00:00 (95/153): libuuid-2.40-13.fc41.s390x.rpm 5.0 MB/s | 29 kB 00:00 (96/153): libunistring-1.1-7.fc41.s390x.rpm 33 MB/s | 560 kB 00:00 (97/153): libverto-0.3.2-8.fc40.s390x.rpm 2.5 MB/s | 21 kB 00:00 (98/153): libxcrypt-4.4.36-5.fc40.s390x.rpm 27 MB/s | 124 kB 00:00 (99/153): libzstd-1.5.6-1.fc41.s390x.rpm 51 MB/s | 345 kB 00:00 (100/153): lua-libs-5.4.6-5.fc40.s390x.rpm 22 MB/s | 143 kB 00:00 (101/153): libxml2-2.12.6-1.fc41.s390x.rpm 65 MB/s | 708 kB 00:00 (102/153): lua-srpm-macros-1-13.fc40.noarch.rpm 2.0 MB/s | 8.7 kB 00:00 (103/153): lz4-libs-1.9.4-6.fc40.s390x.rpm 11 MB/s | 83 kB 00:00 (104/153): ncurses-base-6.4-12.20240127.fc40.no 12 MB/s | 64 kB 00:00 (105/153): mpfr-4.2.1-3.fc40.s390x.rpm 30 MB/s | 300 kB 00:00 (106/153): ncurses-libs-6.4-12.20240127.fc40.s3 50 MB/s | 363 kB 00:00 (107/153): ocaml-srpm-macros-9-3.fc40.noarch.rp 1.6 MB/s | 9.1 kB 00:00 (108/153): openblas-srpm-macros-2-17.fc41.noarc 811 kB/s | 7.7 kB 00:00 (109/153): openldap-2.6.7-1.fc40.s390x.rpm 33 MB/s | 263 kB 00:00 (110/153): p11-kit-trust-0.25.3-4.fc40.s390x.rp 27 MB/s | 144 kB 00:00 (111/153): p11-kit-0.25.3-4.fc40.s390x.rpm 34 MB/s | 519 kB 00:00 (112/153): package-notes-srpm-macros-0.5-11.fc4 1.4 MB/s | 9.9 kB 00:00 (113/153): pam-libs-1.6.1-1.fc41.s390x.rpm 11 MB/s | 58 kB 00:00 (114/153): pam-1.6.1-1.fc41.s390x.rpm 37 MB/s | 525 kB 00:00 (115/153): patch-2.7.6-24.fc40.s390x.rpm 12 MB/s | 141 kB 00:00 (116/153): pcre2-10.43-1.fc41.s390x.rpm 34 MB/s | 263 kB 00:00 (117/153): openssl-libs-3.2.1-6.fc41.s390x.rpm 47 MB/s | 2.0 MB 00:00 (118/153): pcre2-syntax-10.43-1.fc41.noarch.rpm 18 MB/s | 149 kB 00:00 (119/153): perl-srpm-macros-1-53.fc40.noarch.rp 1.7 MB/s | 8.4 kB 00:00 (120/153): pkgconf-2.1.0-1.fc40.s390x.rpm 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rpm-libs-4.19.1.1-1.fc40.s390x.rpm 21 MB/s | 325 kB 00:00 (136/153): sed-4.9-1.fc40.s390x.rpm 38 MB/s | 312 kB 00:00 (137/153): rpm-sequoia-1.6.0-2.fc40.s390x.rpm 51 MB/s | 981 kB 00:00 (138/153): setup-2.14.5-2.fc40.noarch.rpm 9.5 MB/s | 148 kB 00:00 (139/153): sqlite-libs-3.45.2-1.fc41.s390x.rpm 54 MB/s | 762 kB 00:00 (140/153): shadow-utils-4.15.1-2.fc41.s390x.rpm 69 MB/s | 1.3 MB 00:00 (141/153): unzip-6.0-63.fc40.s390x.rpm 14 MB/s | 195 kB 00:00 (142/153): systemd-libs-255.5-1.fc41.s390x.rpm 34 MB/s | 720 kB 00:00 (143/153): tar-1.35-3.fc40.s390x.rpm 41 MB/s | 871 kB 00:00 (144/153): which-2.21-41.fc40.s390x.rpm 11 MB/s | 43 kB 00:00 (145/153): util-linux-core-2.40-13.fc41.s390x.r 50 MB/s | 526 kB 00:00 (146/153): xxhash-libs-0.8.2-2.fc40.s390x.rpm 9.2 MB/s | 36 kB 00:00 (147/153): xz-libs-5.4.6-3.fc41.s390x.rpm 25 MB/s | 116 kB 00:00 (148/153): util-linux-2.40-13.fc41.s390x.rpm 57 MB/s | 1.1 MB 00:00 (149/153): xz-5.4.6-3.fc41.s390x.rpm 49 MB/s | 533 kB 00:00 (150/153): zig-srpm-macros-1-2.fc40.noarch.rpm 1.4 MB/s | 8.0 kB 00:00 (151/153): zlib-ng-compat-2.1.6-2.fc40.s390x.rp 11 MB/s | 66 kB 00:00 (152/153): zip-3.0-40.fc40.s390x.rpm 32 MB/s | 283 kB 00:00 (153/153): zstd-1.5.6-1.fc41.s390x.rpm 49 MB/s | 516 kB 00:00 -------------------------------------------------------------------------------- Total 89 MB/s | 53 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-9.fc41.s390x 1/1 Preparing : 1/1 Installing : libgcc-14.0.1-0.15.fc41.s390x 1/153 Running scriptlet: libgcc-14.0.1-0.15.fc41.s390x 1/153 Installing : crypto-policies-20240320-1.git58e3d95.fc41.noarc 2/153 Running scriptlet: crypto-policies-20240320-1.git58e3d95.fc41.noarc 2/153 Installing : fedora-release-identity-basic-41-0.9.noarch 3/153 Installing : fedora-repos-rawhide-41-0.1.noarch 4/153 Installing : fedora-gpg-keys-41-0.1.noarch 5/153 Installing : fedora-repos-41-0.1.noarch 6/153 Installing : fedora-release-common-41-0.9.noarch 7/153 Installing : fedora-release-41-0.9.noarch 8/153 Installing : setup-2.14.5-2.fc40.noarch 9/153 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.5-2.fc40.noarch 9/153 Installing : filesystem-3.18-9.fc41.s390x 10/153 Installing : basesystem-11-20.fc40.noarch 11/153 Installing : rust-srpm-macros-26.2-1.fc41.noarch 12/153 Installing : qt6-srpm-macros-6.7.0-1.fc41.noarch 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27/153 Installing : bash-5.2.26-3.fc40.s390x 28/153 Running scriptlet: bash-5.2.26-3.fc40.s390x 28/153 Installing : zlib-ng-compat-2.1.6-2.fc40.s390x 29/153 Installing : xz-libs-1:5.4.6-3.fc41.s390x 30/153 Installing : bzip2-libs-1.0.8-18.fc40.s390x 31/153 Installing : readline-8.2-8.fc40.s390x 32/153 Installing : libstdc++-14.0.1-0.15.fc41.s390x 33/153 Installing : libuuid-2.40-13.fc41.s390x 34/153 Installing : libzstd-1.5.6-1.fc41.s390x 35/153 Installing : elfutils-libelf-0.191-7.fc41.s390x 36/153 Installing : popt-1.19-6.fc40.s390x 37/153 Installing : libblkid-2.40-13.fc41.s390x 38/153 Installing : gmp-1:6.3.0-1.fc41.s390x 39/153 Installing : libattr-2.5.2-3.fc40.s390x 40/153 Installing : libacl-2.3.2-1.fc40.s390x 41/153 Installing : libxcrypt-4.4.36-5.fc40.s390x 42/153 Installing : gdbm-libs-1:1.23-6.fc40.s390x 43/153 Installing : libeconf-0.6.2-1.fc41.s390x 44/153 Installing : lz4-libs-1.9.4-6.fc40.s390x 45/153 Installing : mpfr-4.2.1-3.fc40.s390x 46/153 Installing : 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Installing : patch-2.7.6-24.fc40.s390x 88/153 Installing : elfutils-default-yama-scope-0.191-7.fc41.noarch 89/153 Running scriptlet: elfutils-default-yama-scope-0.191-7.fc41.noarch 89/153 Installing : cpio-2.15-1.fc40.s390x 90/153 Installing : diffutils-3.10-5.fc40.s390x 91/153 Installing : keyutils-libs-1.6.3-3.fc40.s390x 92/153 Installing : libbrotli-1.1.0-3.fc40.s390x 93/153 Installing : libffi-3.4.6-1.fc41.s390x 94/153 Installing : p11-kit-0.25.3-4.fc40.s390x 95/153 Installing : p11-kit-trust-0.25.3-4.fc40.s390x 96/153 Running scriptlet: p11-kit-trust-0.25.3-4.fc40.s390x 96/153 Installing : libgomp-14.0.1-0.15.fc41.s390x 97/153 Installing : libnghttp2-1.61.0-1.fc41.s390x 98/153 Installing : libpkgconf-2.1.0-1.fc40.s390x 99/153 Installing : pkgconf-2.1.0-1.fc40.s390x 100/153 Installing : pkgconf-pkg-config-2.1.0-1.fc40.s390x 101/153 Installing : libtool-ltdl-2.4.7-10.fc40.s390x 102/153 Installing : libverto-0.3.2-8.fc40.s390x 103/153 Installing : xxhash-libs-0.8.2-2.fc40.s390x 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rpm-libs-4.19.1.1-1.fc40.s390x 137/153 Running scriptlet: rpm-4.19.1.1-1.fc40.s390x 138/153 Installing : rpm-4.19.1.1-1.fc40.s390x 138/153 Installing : efi-srpm-macros-5-11.fc40.noarch 139/153 Installing : lua-srpm-macros-1-13.fc40.noarch 140/153 Installing : zig-srpm-macros-1-2.fc40.noarch 141/153 Installing : rpm-build-libs-4.19.1.1-1.fc40.s390x 142/153 Installing : ansible-srpm-macros-1-15.fc41.noarch 143/153 Installing : fonts-srpm-macros-1:2.0.5-14.fc40.noarch 144/153 Installing : forge-srpm-macros-0.3.1-1.fc41.noarch 145/153 Installing : go-srpm-macros-3.6.0-1.fc41.noarch 146/153 Installing : python-srpm-macros-3.12-9.fc41.noarch 147/153 Installing : redhat-rpm-config-288-1.fc41.noarch 148/153 Installing : rpm-build-4.19.1.1-1.fc40.s390x 149/153 Installing : pyproject-srpm-macros-1.12.0-1.fc40.noarch 150/153 Installing : util-linux-2.40-13.fc41.s390x 151/153 Running scriptlet: util-linux-2.40-13.fc41.s390x 151/153 Installing : which-2.21-41.fc40.s390x 152/153 Installing : info-7.1-2.fc40.s390x 153/153 Running scriptlet: filesystem-3.18-9.fc41.s390x 153/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 153/153 Running scriptlet: authselect-libs-1.5.0-5.fc41.s390x 153/153 Running scriptlet: rpm-4.19.1.1-1.fc40.s390x 153/153 Running scriptlet: info-7.1-2.fc40.s390x 153/153 Installed: alternatives-1.26-3.fc40.s390x ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.s390x authselect-1.5.0-5.fc41.s390x authselect-libs-1.5.0-5.fc41.s390x basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.s390x binutils-2.42.50-6.fc41.s390x binutils-gold-2.42.50-6.fc41.s390x bzip2-1.0.8-18.fc40.s390x bzip2-libs-1.0.8-18.fc40.s390x ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.s390x coreutils-common-9.5-1.fc41.s390x cpio-2.15-1.fc40.s390x cracklib-2.9.11-5.fc40.s390x crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.s390x cyrus-sasl-lib-2.1.28-19.fc40.s390x debugedit-5.0-14.fc40.s390x diffutils-3.10-5.fc40.s390x dwz-0.15-6.fc40.s390x ed-1.20.2-1.fc41.s390x efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.s390x elfutils-debuginfod-client-0.191-7.fc41.s390x elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.s390x elfutils-libs-0.191-7.fc41.s390x fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.s390x file-libs-5.45-5.fc41.s390x filesystem-3.18-9.fc41.s390x findutils-1:4.9.0-8.fc40.s390x fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.s390x gdb-minimal-14.2-5.fc41.s390x gdbm-1:1.23-6.fc40.s390x gdbm-libs-1:1.23-6.fc40.s390x ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.s390x glibc-common-2.39.9000-14.fc41.s390x glibc-gconv-extra-2.39.9000-14.fc41.s390x glibc-minimal-langpack-2.39.9000-14.fc41.s390x gmp-1:6.3.0-1.fc41.s390x gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.s390x gzip-1.13-1.fc40.s390x info-7.1-2.fc40.s390x jansson-2.13.1-9.fc40.s390x kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.s390x krb5-libs-1.21.2-5.fc40.s390x libacl-2.3.2-1.fc40.s390x libarchive-3.7.2-3.fc41.s390x libattr-2.5.2-3.fc40.s390x libblkid-2.40-13.fc41.s390x libbrotli-1.1.0-3.fc40.s390x libcap-2.69-8.fc41.s390x libcap-ng-0.8.5-1.fc41.s390x libcom_err-1.47.0-5.fc40.s390x libcurl-8.7.1-1.fc41.s390x libeconf-0.6.2-1.fc41.s390x libevent-2.1.12-12.fc40.s390x libfdisk-2.40-13.fc41.s390x libffi-3.4.6-1.fc41.s390x libgcc-14.0.1-0.15.fc41.s390x libgomp-14.0.1-0.15.fc41.s390x libidn2-2.3.7-1.fc40.s390x libmount-2.40-13.fc41.s390x libnghttp2-1.61.0-1.fc41.s390x libnsl2-2.0.1-1.fc40.s390x libpkgconf-2.1.0-1.fc40.s390x libpsl-0.21.5-3.fc40.s390x libpwquality-1.4.5-9.fc40.s390x libselinux-3.6-4.fc40.s390x libsemanage-3.6-3.fc40.s390x libsepol-3.6-3.fc40.s390x libsmartcols-2.40-13.fc41.s390x libssh-0.10.6-6.fc41.s390x libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.s390x libtasn1-4.19.0-6.fc40.s390x libtirpc-1.3.4-1.rc3.fc41.s390x libtool-ltdl-2.4.7-10.fc40.s390x libunistring-1.1-7.fc41.s390x libutempter-1.2.1-13.fc40.s390x libuuid-2.40-13.fc41.s390x libverto-0.3.2-8.fc40.s390x libxcrypt-4.4.36-5.fc40.s390x libxml2-2.12.6-1.fc41.s390x libzstd-1.5.6-1.fc41.s390x lua-libs-5.4.6-5.fc40.s390x lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.s390x mpfr-4.2.1-3.fc40.s390x ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.s390x ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.s390x openssl-libs-1:3.2.1-6.fc41.s390x p11-kit-0.25.3-4.fc40.s390x p11-kit-trust-0.25.3-4.fc40.s390x package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.s390x pam-libs-1.6.1-1.fc41.s390x patch-2.7.6-24.fc40.s390x pcre2-10.43-1.fc41.s390x pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.s390x pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.s390x popt-1.19-6.fc40.s390x publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.s390x redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.s390x rpm-build-4.19.1.1-1.fc40.s390x rpm-build-libs-4.19.1.1-1.fc40.s390x rpm-libs-4.19.1.1-1.fc40.s390x rpm-sequoia-1.6.0-2.fc40.s390x rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.s390x setup-2.14.5-2.fc40.noarch shadow-utils-2:4.15.1-2.fc41.s390x sqlite-libs-3.45.2-1.fc41.s390x systemd-libs-255.5-1.fc41.s390x tar-2:1.35-3.fc40.s390x unzip-6.0-63.fc40.s390x util-linux-2.40-13.fc41.s390x util-linux-core-2.40-13.fc41.s390x which-2.21-41.fc40.s390x xxhash-libs-0.8.2-2.fc40.s390x xz-1:5.4.6-3.fc41.s390x xz-libs-1:5.4.6-3.fc41.s390x zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.s390x zlib-ng-compat-2.1.6-2.fc40.s390x zstd-1.5.6-1.fc41.s390x Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.s390x ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.s390x authselect-1.5.0-5.fc41.s390x authselect-libs-1.5.0-5.fc41.s390x basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.s390x binutils-2.42.50-6.fc41.s390x binutils-gold-2.42.50-6.fc41.s390x bzip2-1.0.8-18.fc40.s390x bzip2-libs-1.0.8-18.fc40.s390x ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.s390x coreutils-common-9.5-1.fc41.s390x cpio-2.15-1.fc40.s390x cracklib-2.9.11-5.fc40.s390x crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.s390x cyrus-sasl-lib-2.1.28-19.fc40.s390x debugedit-5.0-14.fc40.s390x diffutils-3.10-5.fc40.s390x dwz-0.15-6.fc40.s390x ed-1.20.2-1.fc41.s390x efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.s390x elfutils-debuginfod-client-0.191-7.fc41.s390x elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.s390x elfutils-libs-0.191-7.fc41.s390x fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.s390x file-libs-5.45-5.fc41.s390x filesystem-3.18-9.fc41.s390x findutils-4.9.0-8.fc40.s390x fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.s390x gdb-minimal-14.2-5.fc41.s390x gdbm-1.23-6.fc40.s390x gdbm-libs-1.23-6.fc40.s390x ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.s390x glibc-common-2.39.9000-14.fc41.s390x glibc-gconv-extra-2.39.9000-14.fc41.s390x glibc-minimal-langpack-2.39.9000-14.fc41.s390x gmp-6.3.0-1.fc41.s390x gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.s390x gzip-1.13-1.fc40.s390x info-7.1-2.fc40.s390x jansson-2.13.1-9.fc40.s390x kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.s390x krb5-libs-1.21.2-5.fc40.s390x libacl-2.3.2-1.fc40.s390x libarchive-3.7.2-3.fc41.s390x libattr-2.5.2-3.fc40.s390x libblkid-2.40-13.fc41.s390x libbrotli-1.1.0-3.fc40.s390x libcap-2.69-8.fc41.s390x libcap-ng-0.8.5-1.fc41.s390x libcom_err-1.47.0-5.fc40.s390x libcurl-8.7.1-1.fc41.s390x libeconf-0.6.2-1.fc41.s390x libevent-2.1.12-12.fc40.s390x libfdisk-2.40-13.fc41.s390x libffi-3.4.6-1.fc41.s390x libgcc-14.0.1-0.15.fc41.s390x libgomp-14.0.1-0.15.fc41.s390x libidn2-2.3.7-1.fc40.s390x libmount-2.40-13.fc41.s390x libnghttp2-1.61.0-1.fc41.s390x libnsl2-2.0.1-1.fc40.s390x libpkgconf-2.1.0-1.fc40.s390x libpsl-0.21.5-3.fc40.s390x libpwquality-1.4.5-9.fc40.s390x libselinux-3.6-4.fc40.s390x libsemanage-3.6-3.fc40.s390x libsepol-3.6-3.fc40.s390x libsmartcols-2.40-13.fc41.s390x libssh-0.10.6-6.fc41.s390x libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.s390x libtasn1-4.19.0-6.fc40.s390x libtirpc-1.3.4-1.rc3.fc41.s390x libtool-ltdl-2.4.7-10.fc40.s390x libunistring-1.1-7.fc41.s390x libutempter-1.2.1-13.fc40.s390x libuuid-2.40-13.fc41.s390x libverto-0.3.2-8.fc40.s390x libxcrypt-4.4.36-5.fc40.s390x libxml2-2.12.6-1.fc41.s390x libzstd-1.5.6-1.fc41.s390x lua-libs-5.4.6-5.fc40.s390x lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.s390x mpfr-4.2.1-3.fc40.s390x ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.s390x ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.s390x openssl-libs-3.2.1-6.fc41.s390x p11-kit-0.25.3-4.fc40.s390x p11-kit-trust-0.25.3-4.fc40.s390x package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.s390x pam-libs-1.6.1-1.fc41.s390x patch-2.7.6-24.fc40.s390x pcre2-10.43-1.fc41.s390x pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.s390x pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.s390x popt-1.19-6.fc40.s390x publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.s390x redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.s390x rpm-build-4.19.1.1-1.fc40.s390x rpm-build-libs-4.19.1.1-1.fc40.s390x rpm-libs-4.19.1.1-1.fc40.s390x rpm-sequoia-1.6.0-2.fc40.s390x rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.s390x setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.s390x sqlite-libs-3.45.2-1.fc41.s390x systemd-libs-255.5-1.fc41.s390x tar-1.35-3.fc40.s390x unzip-6.0-63.fc40.s390x util-linux-2.40-13.fc41.s390x util-linux-core-2.40-13.fc41.s390x which-2.21-41.fc40.s390x xxhash-libs-0.8.2-2.fc40.s390x xz-5.4.6-3.fc41.s390x xz-libs-5.4.6-3.fc41.s390x zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.s390x zlib-ng-compat-2.1.6-2.fc40.s390x zstd-1.5.6-1.fc41.s390x Start: buildsrpm Start: rpmbuild -bs warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-affyio-1.66.0-7.fc41.src.rpm RPM build warnings: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.log /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.rpm.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xt7yfpii/R-affyio/R-affyio.spec) Config(child) 3 minutes 45 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-affyio-1.66.0-7.fc41.src.rpm) Config(fedora-39-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1714080096.984571/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1714080096.984571/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1714080096.984571/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.s390x rpm-sequoia-1.6.0-1.fc39.s390x python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Finish: chroot init Start: build phase for R-affyio-1.66.0-7.fc41.src.rpm Start: build setup for R-affyio-1.66.0-7.fc41.src.rpm warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-affyio-1.66.0-7.fc41.src.rpm RPM build warnings: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 313 B/s | 1.5 kB 00:05 Additional repo http_kojipkgs_fedoraproject_org 151 kB/s | 3.8 kB 00:00 fedora 741 B/s | 3.8 kB 00:05 updates 944 B/s | 4.8 kB 00:05 Dependencies resolved. ===================================================================================================================================================== Package Arch Version Repository Size ===================================================================================================================================================== Installing: R-core s390x 4.4.0-1.fc41~bootstrap copr_base 63 M R-devel s390x 4.4.0-1.fc41~bootstrap copr_base 11 k texlive-collection-latexrecommended noarch 11:svn65512-71.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k zlib-ng-compat-devel s390x 2.1.6-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 36 k Installing dependencies: R-core-devel s390x 4.4.0-1.fc41~bootstrap copr_base 88 k R-java s390x 4.4.0-1.fc41~bootstrap copr_base 11 k R-java-devel s390x 4.4.0-1.fc41~bootstrap copr_base 11 k R-rpm-macros noarch 1.2.1-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11 k abattis-cantarell-vf-fonts noarch 0.301-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 120 k adobe-mappings-cmap noarch 20230622-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 114 k adobe-mappings-pdf noarch 20190401-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 687 k alsa-lib s390x 1.2.11-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 525 k annobin-docs noarch 12.51-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 89 k annobin-plugin-gcc s390x 12.51-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 961 k avahi-libs 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===================================================================================================================================================== Install 685 Packages Total download size: 497 M Installed size: 1.3 G Downloading Packages: (1/685): R-devel-4.4.0-1.fc41~bootstrap.s390x.r 2.1 kB/s | 11 kB 00:05 (2/685): R-core-devel-4.4.0-1.fc41~bootstrap.s3 18 kB/s | 88 kB 00:05 (3/685): R-java-4.4.0-1.fc41~bootstrap.s390x.rp 669 kB/s | 11 kB 00:00 (4/685): R-java-devel-4.4.0-1.fc41~bootstrap.s3 657 kB/s | 11 kB 00:00 (5/685): graphite2-1.3.14-15.fc40.s390x.rpm 10 MB/s | 101 kB 00:00 (6/685): graphite2-devel-1.3.14-15.fc40.s390x.r 2.2 MB/s | 21 kB 00:00 (7/685): libRmath-4.4.0-1.fc41~bootstrap.s390x. 13 MB/s | 110 kB 00:00 (8/685): libRmath-devel-4.4.0-1.fc41~bootstrap. 1.7 MB/s | 16 kB 00:00 (9/685): R-rpm-macros-1.2.1-9.fc40.noarch.rpm 522 kB/s | 11 kB 00:00 (10/685): abattis-cantarell-vf-fonts-0.301-12.f 4.4 MB/s | 120 kB 00:00 (11/685): adobe-mappings-cmap-deprecated-202306 7.4 MB/s | 114 kB 00:00 (12/685): adobe-mappings-cmap-20230622-3.fc40.n 59 MB/s | 2.1 MB 00:00 (13/685): alsa-lib-1.2.11-2.fc40.s390x.rpm 54 MB/s | 525 kB 00:00 (14/685): annobin-docs-12.51-1.fc41.noarch.rpm 14 MB/s | 89 kB 00:00 (15/685): adobe-mappings-pdf-20190401-7.fc40.no 17 MB/s | 687 kB 00:00 (16/685): annobin-plugin-gcc-12.51-1.fc41.s390x 58 MB/s | 961 kB 00:00 (17/685): avahi-libs-0.8-26.fc40.s390x.rpm 7.7 MB/s | 67 kB 00:00 (18/685): brotli-1.1.0-3.fc40.s390x.rpm 3.8 MB/s | 20 kB 00:00 (19/685): brotli-devel-1.1.0-3.fc40.s390x.rpm 4.5 MB/s | 34 kB 00:00 (20/685): biber-2.19-5.fc40.noarch.rpm 18 MB/s | 280 kB 00:00 (21/685): bzip2-devel-1.0.8-18.fc40.s390x.rpm 15 MB/s | 213 kB 00:00 (22/685): cairo-1.18.0-3.fc40.s390x.rpm 58 MB/s | 729 kB 00:00 (23/685): cmake-filesystem-3.28.3-4.fc41.s390x. 2.5 MB/s | 18 kB 00:00 (24/685): cairo-devel-1.18.0-3.fc40.s390x.rpm 22 MB/s | 176 kB 00:00 (25/685): copy-jdk-configs-4.1-5.fc40.noarch.rp 3.8 MB/s | 28 kB 00:00 (26/685): crypto-policies-scripts-20240320-1.gi 9.5 MB/s | 108 kB 00:00 (27/685): cups-libs-2.4.7-13.fc41.s390x.rpm 17 MB/s | 278 kB 00:00 (28/685): R-core-4.4.0-1.fc41~bootstrap.s390x.r 12 MB/s | 63 MB 00:05 (29/685): dbus-libs-1.14.10-3.fc40.s390x.rpm 2.6 MB/s | 159 kB 00:00 (30/685): desktop-file-utils-0.26-12.fc40.s390x 11 MB/s | 72 kB 00:00 (31/685): emacs-filesystem-30.0-2.fc41.noarch.r 1.3 MB/s | 7.1 kB 00:00 (32/685): default-fonts-core-sans-4.0-13.fc41.n 1.4 MB/s | 25 kB 00:00 (33/685): expat-2.6.2-1.fc41.s390x.rpm 17 MB/s | 117 kB 00:00 (34/685): flexiblas-3.4.2-1.fc41.s390x.rpm 5.1 MB/s | 25 kB 00:00 (35/685): flexiblas-devel-3.4.2-1.fc41.s390x.rp 15 MB/s | 112 kB 00:00 (36/685): cpp-14.0.1-0.15.fc41.s390x.rpm 68 MB/s | 9.6 MB 00:00 (37/685): flexiblas-openblas-openmp-3.4.2-1.fc4 1.0 MB/s | 18 kB 00:00 (38/685): flexiblas-openblas-openmp64-3.4.2-1.f 3.6 MB/s | 18 kB 00:00 (39/685): fontconfig-2.15.0-4.fc40.s390x.rpm 43 MB/s | 265 kB 00:00 (40/685): 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4.6 MB/s | 32 kB 00:00 (55/685): ghostscript-tools-fonts-10.03.0-1.fc4 1.9 MB/s | 12 kB 00:00 (56/685): ghostscript-tools-printing-10.03.0-1. 2.4 MB/s | 13 kB 00:00 (57/685): glib2-2.80.0-1.fc41.s390x.rpm 94 MB/s | 3.0 MB 00:00 (58/685): glib2-devel-2.80.0-1.fc41.s390x.rpm 84 MB/s | 1.4 MB 00:00 (59/685): glibc-devel-2.39.9000-14.fc41.s390x.r 23 MB/s | 128 kB 00:00 (60/685): glibc-headers-s390-2.39.9000-14.fc41. 50 MB/s | 532 kB 00:00 (61/685): gnutls-3.8.5-1.fc41.s390x.rpm 79 MB/s | 1.1 MB 00:00 (62/685): gcc-gfortran-14.0.1-0.15.fc41.s390x.r 43 MB/s | 11 MB 00:00 (63/685): google-droid-sans-fonts-20200215-19.f 76 MB/s | 2.7 MB 00:00 (64/685): gcc-14.0.1-0.15.fc41.s390x.rpm 97 MB/s | 31 MB 00:00 (65/685): google-noto-fonts-common-20240401-1.f 630 kB/s | 17 kB 00:00 (66/685): google-noto-sans-vf-fonts-20240401-1. 15 MB/s | 594 kB 00:00 (67/685): groff-base-1.23.0-6.fc40.s390x.rpm 70 MB/s | 1.1 MB 00:00 (68/685): harfbuzz-devel-8.4.0-1.fc41.s390x.rpm 38 MB/s | 414 kB 00:00 (69/685): 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(84/685): libX11-devel-1.8.9-1.fc41.s390x.rpm 72 MB/s | 911 kB 00:00 (85/685): libXau-devel-1.0.11-6.fc40.s390x.rpm 3.1 MB/s | 14 kB 00:00 (86/685): libXau-1.0.11-6.fc40.s390x.rpm 5.3 MB/s | 32 kB 00:00 (87/685): libXcomposite-0.4.6-3.fc40.s390x.rpm 3.8 MB/s | 24 kB 00:00 (88/685): libXaw-1.0.16-1.fc41.s390x.rpm 28 MB/s | 210 kB 00:00 (89/685): libXext-1.3.6-1.fc40.s390x.rpm 6.0 MB/s | 40 kB 00:00 (90/685): libXext-devel-1.3.6-1.fc40.s390x.rpm 11 MB/s | 72 kB 00:00 (91/685): libXft-devel-2.3.8-6.fc40.s390x.rpm 9.2 MB/s | 36 kB 00:00 (92/685): libXft-2.3.8-6.fc40.s390x.rpm 15 MB/s | 76 kB 00:00 (93/685): libXmu-1.2.1-1.fc41.s390x.rpm 17 MB/s | 83 kB 00:00 (94/685): libXi-1.8.1-5.fc40.s390x.rpm 6.2 MB/s | 43 kB 00:00 (95/685): libXrender-0.9.11-6.fc40.s390x.rpm 6.7 MB/s | 28 kB 00:00 (96/685): libXpm-3.5.17-3.fc40.s390x.rpm 13 MB/s | 70 kB 00:00 (97/685): libXrender-devel-0.9.11-6.fc40.s390x. 4.0 MB/s | 19 kB 00:00 (98/685): libXt-1.3.0-3.fc40.s390x.rpm 37 MB/s | 191 kB 00:00 (99/685): 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: texlive-base-11:20230311-84.fc41.s390x 1/1 Running scriptlet: copy-jdk-configs-4.1-5.fc40.noarch 1/1 Running scriptlet: crypto-policies-scripts-20240320-1.git58e3d95.fc41.n 1/1 Running scriptlet: java-21-openjdk-headless-1:21.0.2.0.13-3.fc41.s390x 1/1 Preparing : 1/1 Running scriptlet: texlive-base-11:20230311-84.fc41.s390x 1/685 Installing : texlive-base-11:20230311-84.fc41.s390x 1/685 Installing : texlive-lib-11:20230311-84.fc41.s390x 2/685 Installing : libpng-2:1.6.40-3.fc40.s390x 3/685 Installing : zlib-ng-compat-devel-2.1.6-2.fc40.s390x 4/685 Installing : xorg-x11-proto-devel-2024.1-1.fc41.noarch 5/685 Installing : nspr-4.35.0-22.fc41.s390x 6/685 Installing : libgfortran-14.0.1-0.15.fc41.s390x 7/685 Installing : fonts-filesystem-1:2.0.5-14.fc40.noarch 8/685 Installing : urw-base35-fonts-common-20200910-20.fc41.noarch 9/685 Installing : nss-util-3.99.0-1.fc41.s390x 10/685 Installing : libmpc-1.3.1-5.fc40.s390x 11/685 Installing : 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brotli-1.1.0-3.fc40.s390x brotli-devel-1.1.0-3.fc40.s390x bzip2-devel-1.0.8-18.fc40.s390x cairo-1.18.0-3.fc40.s390x cairo-devel-1.18.0-3.fc40.s390x cmake-filesystem-3.28.3-4.fc41.s390x copy-jdk-configs-4.1-5.fc40.noarch cpp-14.0.1-0.15.fc41.s390x crypto-policies-scripts-20240320-1.git58e3d95.fc41.noarch cups-libs-1:2.4.7-13.fc41.s390x dbus-libs-1:1.14.10-3.fc40.s390x default-fonts-core-sans-4.0-13.fc41.noarch desktop-file-utils-0.26-12.fc40.s390x emacs-filesystem-1:30.0-2.fc41.noarch expat-2.6.2-1.fc41.s390x flexiblas-3.4.2-1.fc41.s390x flexiblas-devel-3.4.2-1.fc41.s390x flexiblas-netlib-3.4.2-1.fc41.s390x flexiblas-netlib64-3.4.2-1.fc41.s390x flexiblas-openblas-openmp-3.4.2-1.fc41.s390x flexiblas-openblas-openmp64-3.4.2-1.fc41.s390x fontconfig-2.15.0-4.fc40.s390x fontconfig-devel-2.15.0-4.fc40.s390x fonts-filesystem-1:2.0.5-14.fc40.noarch freetype-2.13.2-5.fc40.s390x freetype-devel-2.13.2-5.fc40.s390x fribidi-1.0.13-4.fc40.s390x gc-8.2.2-6.fc40.s390x gcc-14.0.1-0.15.fc41.s390x gcc-c++-14.0.1-0.15.fc41.s390x gcc-gfortran-14.0.1-0.15.fc41.s390x gcc-plugin-annobin-14.0.1-0.15.fc41.s390x gettext-0.22.5-2.fc41.s390x gettext-envsubst-0.22.5-2.fc41.s390x gettext-libs-0.22.5-2.fc41.s390x gettext-runtime-0.22.5-2.fc41.s390x ghostscript-10.03.0-1.fc41.s390x ghostscript-tools-fonts-10.03.0-1.fc41.noarch ghostscript-tools-printing-10.03.0-1.fc41.noarch glib2-2.80.0-1.fc41.s390x glib2-devel-2.80.0-1.fc41.s390x glibc-devel-2.39.9000-14.fc41.s390x glibc-headers-s390-2.39.9000-14.fc41.noarch gnutls-3.8.5-1.fc41.s390x google-droid-sans-fonts-20200215-19.fc40.noarch google-noto-fonts-common-20240401-1.fc41.noarch google-noto-sans-vf-fonts-20240401-1.fc41.noarch graphite2-1.3.14-15.fc40.s390x graphite2-devel-1.3.14-15.fc40.s390x groff-base-1.23.0-6.fc40.s390x guile30-3.0.7-12.fc40.s390x harfbuzz-8.4.0-1.fc41.s390x harfbuzz-devel-8.4.0-1.fc41.s390x harfbuzz-icu-8.4.0-1.fc41.s390x java-21-openjdk-1:21.0.2.0.13-3.fc41.s390x java-21-openjdk-devel-1:21.0.2.0.13-3.fc41.s390x java-21-openjdk-headless-1:21.0.2.0.13-3.fc41.s390x javapackages-filesystem-6.2.0-9.fc41.noarch jbig2dec-libs-0.20-4.fc40.s390x jbigkit-libs-2.1-29.fc40.s390x kernel-headers-6.9.0-0.rc5.44.fc41.s390x lcms2-2.16-3.fc40.s390x libICE-1.1.1-3.fc40.s390x libRmath-4.4.0-1.fc41~bootstrap.s390x libRmath-devel-4.4.0-1.fc41~bootstrap.s390x libSM-1.2.4-3.fc40.s390x libX11-1.8.9-1.fc41.s390x libX11-common-1.8.9-1.fc41.noarch libX11-devel-1.8.9-1.fc41.s390x libX11-xcb-1.8.9-1.fc41.s390x libXau-1.0.11-6.fc40.s390x libXau-devel-1.0.11-6.fc40.s390x libXaw-1.0.16-1.fc41.s390x libXcomposite-0.4.6-3.fc40.s390x libXext-1.3.6-1.fc40.s390x libXext-devel-1.3.6-1.fc40.s390x libXft-2.3.8-6.fc40.s390x libXft-devel-2.3.8-6.fc40.s390x libXi-1.8.1-5.fc40.s390x libXmu-1.2.1-1.fc41.s390x libXpm-3.5.17-3.fc40.s390x libXrender-0.9.11-6.fc40.s390x libXrender-devel-0.9.11-6.fc40.s390x libXt-1.3.0-3.fc40.s390x libXtst-1.2.4-6.fc40.s390x libasan-14.0.1-0.15.fc41.s390x libatomic-14.0.1-0.15.fc41.s390x libb2-0.98.1-11.fc40.s390x libblkid-devel-2.40-13.fc41.s390x libdatrie-0.2.13-9.fc40.s390x libffi-devel-3.4.6-1.fc41.s390x libfontenc-1.1.8-1.fc41.s390x libgfortran-14.0.1-0.15.fc41.s390x libgs-10.03.0-1.fc41.s390x libicu-74.2-1.fc40.s390x libicu-devel-74.2-1.fc40.s390x libijs-0.35-22.fc40.s390x libjpeg-turbo-3.0.2-2.fc41.s390x liblerc-4.0.0-6.fc40.s390x libmount-devel-2.40-13.fc41.s390x libmpc-1.3.1-5.fc40.s390x libpaper-1:2.1.1-5.fc41.s390x libpng-2:1.6.40-3.fc40.s390x libpng-devel-2:1.6.40-3.fc40.s390x libselinux-devel-3.6-4.fc40.s390x libsepol-devel-3.6-3.fc40.s390x libstdc++-devel-14.0.1-0.15.fc41.s390x libtextstyle-0.22.5-2.fc41.s390x libthai-0.1.29-8.fc40.s390x libtiff-4.6.0-2.fc40.s390x libtirpc-devel-1.3.4-1.rc3.fc41.s390x libubsan-14.0.1-0.15.fc41.s390x libwebp-1.4.0-1.fc41.s390x libxcb-1.17.0-1.fc41.s390x libxcb-devel-1.17.0-1.fc41.s390x libxcrypt-devel-4.4.36-5.fc40.s390x libxml2-devel-2.12.6-1.fc41.s390x libxslt-1.1.39-3.fc40.s390x lksctp-tools-1.0.19-6.fc40.s390x lua-5.4.6-5.fc40.s390x lua-posix-36.2.1-6.fc40.s390x mailcap-2.1.54-5.fc40.noarch make-1:4.4.1-6.fc40.s390x mkfontscale-1.2.2-6.fc40.s390x mpdecimal-2.5.1-9.fc40.s390x ncurses-6.4-12.20240127.fc40.s390x nettle-3.9.1-6.fc40.s390x nspr-4.35.0-22.fc41.s390x nss-3.99.0-1.fc41.s390x nss-softokn-3.99.0-1.fc41.s390x nss-softokn-freebl-3.99.0-1.fc41.s390x nss-sysinit-3.99.0-1.fc41.s390x nss-util-3.99.0-1.fc41.s390x openblas-0.3.26-4.fc40.s390x openblas-openmp-0.3.26-4.fc40.s390x openblas-openmp64-0.3.26-4.fc40.s390x openjpeg2-2.5.2-1.fc41.s390x pango-1.52.2-1.fc41.s390x pcre2-devel-10.43-1.fc41.s390x pcre2-utf16-10.43-1.fc41.s390x pcre2-utf32-10.43-1.fc41.s390x perl-Authen-SASL-2.1700-3.fc40.noarch perl-AutoLoader-5.74-507.fc41.noarch perl-B-1.88-507.fc41.s390x perl-B-Hooks-EndOfScope-0.28-1.fc41.noarch perl-Business-ISBN-3.009-4.fc40.noarch perl-Business-ISBN-Data-20240420.001-1.fc41.noarch perl-Business-ISMN-1.203-4.fc40.noarch perl-Business-ISSN-1.005-10.fc40.noarch perl-Carp-1.54-502.fc40.noarch perl-Class-Accessor-0.51-20.fc40.noarch perl-Class-Data-Inheritable-0.09-8.fc40.noarch perl-Class-Inspector-1.36-16.fc40.noarch perl-Class-Method-Modifiers-2.15-4.fc40.noarch perl-Class-Singleton-1.6-11.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Clone-0.46-6.fc40.s390x perl-Compress-Raw-Bzip2-2.211-1.fc41.s390x perl-Compress-Raw-Zlib-2.211-1.fc41.s390x perl-Convert-ASN1-0.34-3.fc40.noarch perl-Data-Compare-1.29-4.fc40.noarch perl-Data-Dump-1.25-10.fc40.noarch perl-Data-Dumper-2.188-503.fc40.s390x perl-Data-OptList-0.114-4.fc40.noarch perl-Data-Uniqid-0.12-33.fc40.noarch perl-Date-ISO8601-0.005-20.fc40.noarch perl-Date-Manip-6.95-1.fc41.noarch perl-DateTime-2:1.65-3.fc40.s390x perl-DateTime-Calendar-Julian-0.107-7.fc40.noarch perl-DateTime-Format-Builder-0.8300-13.fc40.noarch perl-DateTime-Format-Strptime-1:1.79-10.fc40.noarch perl-DateTime-Locale-1.42-1.fc41.noarch perl-DateTime-TimeZone-2.62-1.fc40.noarch perl-DateTime-TimeZone-SystemV-0.010-21.fc40.noarch perl-DateTime-TimeZone-Tzfile-0.011-21.fc40.noarch perl-Devel-CallChecker-0.009-5.fc40.s390x perl-Devel-Caller-2.07-5.fc40.s390x perl-Devel-GlobalDestruction-0.14-24.fc40.noarch perl-Devel-LexAlias-0.05-36.fc40.s390x perl-Devel-StackTrace-1:2.05-3.fc40.noarch perl-Digest-1.20-502.fc40.noarch perl-Digest-HMAC-1.04-10.fc40.noarch perl-Digest-MD5-2.59-3.fc40.s390x perl-Digest-SHA-1:6.04-503.fc40.s390x perl-Dist-CheckConflicts-0.11-30.fc40.noarch perl-DynaLoader-1.54-507.fc41.s390x perl-DynaLoader-Functions-0.004-4.fc40.noarch perl-Email-Date-Format-1.008-4.fc40.noarch perl-Encode-4:3.21-505.fc41.s390x perl-Encode-Locale-1.05-29.fc40.noarch perl-English-1.11-507.fc41.noarch perl-Errno-1.37-507.fc41.s390x perl-Eval-Closure-0.14-23.fc40.noarch perl-Exception-Class-1.45-10.fc40.noarch perl-Exporter-5.78-3.fc40.noarch perl-ExtUtils-MM-Utils-2:7.70-503.fc40.noarch perl-Fcntl-1.15-507.fc41.s390x perl-File-Basename-2.86-507.fc41.noarch perl-File-Compare-1.100.700-507.fc41.noarch perl-File-Copy-2.41-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Find-Rule-0.34-28.fc40.noarch perl-File-Listing-6.16-3.fc40.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-ShareDir-1.118-11.fc40.noarch perl-File-Slurper-0.014-5.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-Filter-2:1.64-503.fc40.s390x perl-GSSAPI-0.28-45.fc40.s390x perl-Getopt-Long-1:2.57-3.fc40.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTML-Parser-3.82-1.fc41.s390x perl-HTML-Tagset-3.24-1.fc41.noarch perl-HTTP-Cookies-6.11-3.fc40.noarch perl-HTTP-Date-6.06-4.fc40.noarch perl-HTTP-Message-6.45-3.fc40.noarch perl-HTTP-Negotiate-6.01-38.fc40.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-Hash-Util-FieldHash-1.26-507.fc41.s390x perl-I18N-LangTags-0.45-507.fc41.noarch perl-I18N-Langinfo-0.22-507.fc41.s390x perl-IO-1.52-507.fc41.s390x perl-IO-Compress-2.211-1.fc41.noarch perl-IO-HTML-1.004-12.fc40.noarch perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IO-String-1.08-50.fc40.noarch perl-IPC-Cmd-2:1.04-504.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-IPC-Run3-0.049-1.fc40.noarch perl-IPC-SysV-2.09-505.fc40.s390x perl-IPC-System-Simple-1.30-13.fc40.noarch perl-JSON-4.10-5.fc40.noarch perl-LDAP-1:0.68-13.fc40.noarch perl-LWP-MediaTypes-6.04-18.fc41.noarch perl-LWP-Protocol-https-6.14-1.fc41.noarch perl-Lingua-Translit-0.29-6.fc40.noarch perl-List-AllUtils-0.19-12.fc40.noarch perl-List-SomeUtils-0.59-5.fc40.noarch perl-List-UtilsBy-0.12-9.fc40.noarch perl-Locale-Maketext-1.33-503.fc40.noarch perl-Locale-Maketext-Simple-1:0.21-507.fc41.noarch perl-Log-Dispatch-2.71-4.fc40.noarch perl-Log-Dispatch-FileRotate-1.38-9.fc40.noarch perl-Log-Log4perl-1.57-5.fc40.noarch perl-MIME-Base64-3.16-503.fc40.s390x perl-MIME-Charset-1.013.1-5.fc40.noarch perl-MIME-Lite-3.033-10.fc40.noarch perl-MIME-Types-2.26-1.fc40.noarch perl-MRO-Compat-0.15-9.fc40.noarch perl-Mail-Sender-1:0.903-24.fc40.noarch perl-Mail-Sendmail-0.80-20.fc40.noarch perl-MailTools-2.21-16.fc40.noarch perl-Math-BigInt-1:2.0030.02-3.fc40.noarch perl-Math-Complex-1.62-507.fc41.noarch perl-Module-CoreList-1:5.20240320-1.fc41.noarch perl-Module-Implementation-0.09-39.fc40.noarch perl-Module-Load-1:0.36-503.fc40.noarch perl-Module-Load-Conditional-0.74-503.fc40.noarch perl-Module-Metadata-1.000038-5.fc40.noarch perl-Module-Runtime-0.016-22.fc40.noarch perl-Mozilla-CA-20240313-1.fc41.noarch perl-NTLM-1.09-38.fc40.noarch perl-Net-HTTP-6.23-4.fc40.noarch perl-Net-SMTP-SSL-1.04-24.fc40.noarch perl-Net-SSLeay-1.94-3.fc40.s390x perl-Number-Compare-0.03-38.fc40.noarch perl-Opcode-1.64-507.fc41.s390x perl-POSIX-2.13-507.fc41.s390x perl-Package-Generator-1.106-31.fc40.noarch perl-Package-Stash-0.40-7.fc40.noarch perl-Package-Stash-XS-0.30-7.fc40.s390x perl-PadWalker-2.5-13.fc40.s390x perl-Params-Check-1:0.38-502.fc40.noarch perl-Params-Classify-0.015-22.fc40.s390x perl-Params-Util-1.102-14.fc40.s390x perl-Params-Validate-1.31-7.fc40.s390x perl-Params-ValidationCompiler-0.31-5.fc40.noarch perl-Parse-RecDescent-1.967015-22.fc40.noarch perl-PathTools-3.89-502.fc40.s390x perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Html-1.34-507.fc41.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-503.fc40.noarch perl-Ref-Util-0.204-20.fc40.noarch perl-Ref-Util-XS-0.117-22.fc40.s390x perl-Regexp-Common-2017060201-24.fc40.noarch perl-Role-Tiny-2.002004-11.fc40.noarch perl-Safe-2.44-507.fc41.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.s390x perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.s390x perl-Sort-Key-1.33-30.fc40.s390x perl-Specio-0.48-6.fc40.noarch perl-Storable-1:3.32-502.fc40.s390x perl-Sub-Exporter-0.991-3.fc40.noarch perl-Sub-Exporter-Progressive-0.001013-24.fc40.noarch perl-Sub-Identify-0.14-26.fc40.s390x perl-Sub-Install-0.929-5.fc40.noarch perl-Symbol-1.09-507.fc41.noarch perl-Sys-Hostname-1.25-507.fc41.s390x perl-Sys-Syslog-0.36-504.fc40.s390x perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-Balanced-2.06-502.fc40.noarch perl-Text-BibTeX-0.89-5.fc40.s390x perl-Text-CSV-2.03-3.fc40.noarch perl-Text-Glob-0.11-23.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Roman-3.5-27.fc40.noarch perl-Text-Soundex-3.05-30.fc40.s390x perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Text-Unidecode-1.30-24.fc40.noarch perl-Tie-4.6-507.fc41.noarch perl-Tie-Cycle-1.228-1.fc40.noarch perl-Tie-RefHash-1.40-503.fc40.noarch perl-Time-HiRes-4:1.9775-502.fc40.s390x perl-Time-Local-2:1.350-5.fc40.noarch perl-TimeDate-1:2.33-14.fc40.noarch perl-Try-Tiny-0.31-9.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-Unicode-Collate-1.31-502.fc40.s390x perl-Unicode-LineBreak-2019.001-20.fc40.s390x perl-Unicode-Normalize-1.32-502.fc40.s390x perl-Unicode-UCD-0.78-507.fc41.noarch perl-Variable-Magic-0.64-1.fc41.s390x perl-WWW-RobotRules-6.02-39.fc40.noarch perl-XML-LibXML-1:2.0210-1.fc40.s390x perl-XML-LibXML-Simple-1.01-14.fc40.noarch perl-XML-LibXSLT-2.002.001-5.fc40.s390x perl-XML-NamespaceSupport-1.12-23.fc40.noarch perl-XML-Parser-2.47-3.fc40.s390x perl-XML-SAX-1.02-16.fc40.noarch perl-XML-SAX-Base-1.09-23.fc40.noarch perl-XML-Writer-0.900-14.fc40.noarch perl-XML-XPath-1.48-6.fc40.noarch perl-XString-0.005-12.fc40.s390x perl-autodie-2.37-3.fc40.noarch perl-autovivification-0.18-22.fc40.s390x perl-base-2.27-507.fc41.noarch perl-constant-1.33-503.fc40.noarch perl-deprecate-0.04-507.fc41.noarch perl-encoding-4:3.00-505.fc41.s390x perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.s390x perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.s390x perl-libwww-perl-6.77-1.fc41.noarch perl-locale-1.10-507.fc41.noarch perl-meta-notation-5.38.2-507.fc41.noarch perl-mro-1.28-507.fc41.s390x perl-namespace-autoclean-0.29-18.fc40.noarch perl-namespace-clean-0.27-26.fc40.noarch perl-open-1.13-507.fc41.noarch perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-sigtrap-1.10-507.fc41.noarch perl-subs-1.04-507.fc41.noarch perl-vars-1.05-507.fc41.noarch perl-version-8:0.99.30-3.fc40.s390x perltidy-20240202-1.fc40.noarch pixman-0.43.4-1.fc41.s390x pixman-devel-0.43.4-1.fc41.s390x python-pip-wheel-24.0-2.fc41.noarch python3-3.12.3-2.fc41.s390x python3-libs-3.12.3-2.fc41.s390x python3-packaging-24.0-1.fc41.noarch sombok-2.4.0-21.fc40.s390x sysprof-capture-devel-46.0-1.fc41.s390x tcl-1:8.6.14-1.fc41.s390x tcl-devel-1:8.6.14-1.fc41.s390x teckit-2.5.12-2.fc40.s390x texlive-ae-11:svn15878.1.4-71.fc40.noarch texlive-algorithms-11:svn42428-71.fc40.noarch texlive-alphalph-11:svn53087-71.fc40.noarch texlive-amscls-11:svn55378-71.fc40.noarch texlive-amsfonts-11:svn61937-71.fc40.noarch texlive-amsmath-11:svn63514-71.fc40.noarch texlive-anysize-11:svn15878.0-71.fc40.noarch texlive-atbegshi-11:svn53051-71.fc40.noarch texlive-attachfile-11:svn42099-71.fc40.noarch texlive-attachfile2-11:svn57959-84.fc41.noarch texlive-atveryend-11:svn53108-71.fc40.noarch texlive-auto-pst-pdf-11:svn56596-71.fc40.noarch texlive-auxhook-11:svn53173-71.fc40.noarch texlive-avantgar-11:svn61983-71.fc40.noarch texlive-babel-11:svn65823-71.fc40.noarch texlive-babel-english-11:svn44495-71.fc40.noarch texlive-babelbib-11:svn57349-71.fc40.noarch texlive-base-11:20230311-84.fc41.s390x texlive-beamer-11:svn65984-71.fc40.noarch texlive-bera-11:svn20031.0-71.fc40.noarch texlive-beton-11:svn15878.0-71.fc40.noarch texlive-biblatex-11:svn66403-71.fc40.noarch texlive-bibtex-11:svn66186-84.fc41.s390x texlive-bidi-11:svn65572-71.fc40.noarch texlive-bigintcalc-11:svn53172-71.fc40.noarch texlive-bitset-11:svn53837-71.fc40.noarch texlive-bookman-11:svn61719-71.fc40.noarch texlive-bookmark-11:svn56885-71.fc40.noarch texlive-booktabs-11:svn53402-71.fc40.noarch texlive-breakurl-11:svn29901.1.40-71.fc40.noarch texlive-breqn-11:svn60881-71.fc40.noarch texlive-caption-11:svn66580-71.fc40.noarch texlive-carlisle-11:svn59577-71.fc40.noarch texlive-catchfile-11:svn53084-71.fc40.noarch texlive-changepage-11:svn15878.1.0c-71.fc40.noarch texlive-charter-11:svn15878.0-71.fc40.noarch texlive-cite-11:svn36428.5.5-71.fc40.noarch texlive-cm-11:svn57963-71.fc40.noarch texlive-cm-super-11:svn15878.0-71.fc40.noarch texlive-cmap-11:svn57640-71.fc40.noarch texlive-collection-basic-11:svn59159-71.fc40.noarch texlive-collection-latex-11:svn63515-71.fc40.noarch texlive-collection-latexrecommended-11:svn65512-71.fc40.noarch texlive-colorprofiles-11:svn49086-71.fc40.noarch texlive-colortbl-11:svn64015-71.fc40.noarch texlive-courier-11:svn61719-71.fc40.noarch texlive-crop-11:svn55424-71.fc40.noarch texlive-csquotes-11:svn64389-71.fc40.noarch texlive-ctable-11:svn38672-71.fc40.noarch texlive-ctablestack-11:svn38514-71.fc40.noarch texlive-currfile-11:svn64673-71.fc40.noarch texlive-dehyph-11:svn48599-71.fc40.noarch texlive-dvipdfmx-11:svn66203-84.fc41.s390x texlive-dvips-11:svn66203-84.fc41.s390x texlive-ec-11:svn25033.1.0-71.fc40.noarch texlive-enctex-11:svn34957.0-71.fc40.noarch texlive-enumitem-11:svn51423-71.fc40.noarch texlive-epstopdf-11:svn66461-84.fc41.noarch texlive-epstopdf-pkg-11:svn53546-71.fc40.noarch texlive-eso-pic-11:svn56658-71.fc40.noarch texlive-etex-11:svn66203-71.fc40.noarch texlive-etex-pkg-11:svn41784-71.fc40.noarch texlive-etexcmds-11:svn53171-71.fc40.noarch texlive-etoolbox-11:svn56554-71.fc40.noarch texlive-euenc-11:svn19795.0.1h-71.fc40.noarch texlive-euler-11:svn42428-71.fc40.noarch texlive-everysel-11:svn57489-71.fc40.noarch texlive-everyshi-11:svn57001-71.fc40.noarch texlive-extsizes-11:svn17263.1.4a-71.fc40.noarch texlive-fancybox-11:svn18304.1.4-71.fc40.noarch texlive-fancyhdr-11:svn64977-71.fc40.noarch texlive-fancyref-11:svn15878.0.9c-71.fc40.noarch texlive-fancyvrb-11:svn65585-71.fc40.noarch texlive-filecontents-11:svn52142-71.fc40.noarch texlive-filehook-11:svn64822-71.fc40.noarch texlive-finstrut-11:svn21719.0.5-71.fc40.noarch texlive-firstaid-11:svn64892-71.fc40.noarch texlive-fix2col-11:svn38770-71.fc40.noarch texlive-float-11:svn15878.1.3d-71.fc40.noarch texlive-fontspec-11:svn63386-71.fc40.noarch texlive-footmisc-11:svn62524-71.fc40.noarch texlive-footnotehyper-11:svn60374-71.fc40.noarch texlive-fp-11:svn49719-71.fc40.noarch texlive-fpl-11:svn54512-71.fc40.noarch texlive-geometry-11:svn61719-71.fc40.noarch texlive-gettitlestring-11:svn53170-71.fc40.noarch texlive-glyphlist-11:svn54074-84.fc41.noarch texlive-graphics-11:svn66204-71.fc40.noarch texlive-graphics-cfg-11:svn41448-71.fc40.noarch texlive-graphics-def-11:svn64487-71.fc40.noarch texlive-grfext-11:svn53024-71.fc40.noarch texlive-grffile-11:svn52756-71.fc40.noarch texlive-gsftopk-11:svn52851-84.fc41.s390x texlive-helvetic-11:svn61719-71.fc40.noarch texlive-hobsub-11:svn52810-71.fc40.noarch texlive-hologo-11:svn61719-71.fc40.noarch texlive-hopatch-11:svn65491-71.fc40.noarch texlive-hycolor-11:svn53584-71.fc40.noarch texlive-hypdoc-11:svn65678-71.fc40.noarch texlive-hyperref-11:svn65758-71.fc40.noarch texlive-hyph-utf8-11:svn61719-71.fc40.noarch texlive-hyphen-base-11:svn66413-71.fc40.noarch texlive-hyphenex-11:svn57387-71.fc40.noarch texlive-ifmtarg-11:svn47544-71.fc40.noarch texlive-ifplatform-11:svn45533-71.fc40.noarch texlive-iftex-11:svn61910-71.fc40.noarch texlive-index-11:svn24099.4.1beta-71.fc40.noarch texlive-infwarerr-11:svn53023-71.fc40.noarch texlive-intcalc-11:svn53168-71.fc40.noarch texlive-jknapltx-11:svn19440.0-71.fc40.noarch texlive-kastrup-11:svn15878.0-71.fc40.noarch texlive-knuth-lib-11:svn57963-71.fc40.noarch texlive-knuth-local-11:svn57963-71.fc40.noarch texlive-koma-script-11:svn64685-71.fc40.noarch texlive-kpathsea-11:svn66209-84.fc41.s390x texlive-kvdefinekeys-11:svn53193-71.fc40.noarch texlive-kvoptions-11:svn63622-71.fc40.noarch texlive-kvsetkeys-11:svn64632-71.fc40.noarch texlive-l3backend-11:svn65573-71.fc40.noarch texlive-l3experimental-11:svn65621-71.fc40.noarch texlive-l3kernel-11:svn66094-71.fc40.noarch texlive-l3packages-11:svn65722-71.fc40.noarch texlive-latex-11:svn65161-84.fc41.noarch texlive-latex-fonts-11:svn28888.0-71.fc40.noarch texlive-latex-lab-11:svn64892-71.fc40.noarch texlive-latexbug-11:svn63596-71.fc40.noarch texlive-latexconfig-11:svn53525-71.fc40.noarch texlive-letltxmacro-11:svn53022-71.fc40.noarch texlive-lib-11:20230311-84.fc41.s390x texlive-lineno-11:svn65586-71.fc40.noarch texlive-listings-11:svn66222-71.fc40.noarch texlive-lm-11:svn65956-71.fc40.noarch texlive-lm-math-11:svn36915.1.959-71.fc40.noarch texlive-logreq-11:svn53003-71.fc40.noarch texlive-ltabptch-11:svn17533.1.74d-71.fc40.noarch texlive-ltxcmds-11:svn56421-71.fc40.noarch texlive-ltxmisc-11:svn21927.0-71.fc40.noarch texlive-lua-alt-getopt-11:svn56414-71.fc40.noarch texlive-lua-uni-algos-11:svn62204-71.fc40.noarch texlive-luabidi-11:svn54512-71.fc40.noarch texlive-luahbtex-11:svn66186-84.fc41.s390x texlive-lualatex-math-11:svn61464-71.fc40.noarch texlive-lualibs-11:svn64615-71.fc40.noarch texlive-luaotfload-11:svn64616-84.fc41.noarch texlive-luatex-11:svn66967-84.fc41.s390x texlive-luatexbase-11:svn52663-71.fc40.noarch texlive-lwarp-11:svn66259-84.fc41.noarch texlive-makecmds-11:svn15878.0-71.fc40.noarch texlive-makeindex-11:svn62517-84.fc41.s390x texlive-marginnote-11:svn48383-71.fc40.noarch texlive-marvosym-11:svn29349.2.2a-71.fc40.noarch texlive-mathpazo-11:svn52663-71.fc40.noarch texlive-mathspec-11:svn42773-71.fc40.noarch texlive-mathtools-11:svn63767-71.fc40.noarch texlive-mdwtools-11:svn15878.1.05.4-71.fc40.noarch texlive-memoir-11:svn65040-71.fc40.noarch texlive-metafont-11:svn66186-84.fc41.s390x texlive-metalogo-11:svn18611.0.12-71.fc40.noarch texlive-mflogo-11:svn42428-71.fc40.noarch texlive-mfnfss-11:svn46036-71.fc40.noarch texlive-mfware-11:svn66186-84.fc41.s390x texlive-microtype-11:svn66587-71.fc40.noarch texlive-minitoc-11:svn61719-71.fc40.noarch texlive-mnsymbol-11:svn18651.1.4-71.fc40.noarch texlive-modes-11:svn61719-71.fc40.noarch texlive-mparhack-11:svn59066-71.fc40.noarch texlive-mptopdf-11:svn65952-84.fc41.noarch texlive-ms-11:svn57473-71.fc40.noarch texlive-multido-11:svn18302.1.42-71.fc40.noarch texlive-natbib-11:svn20668.8.31b-71.fc40.noarch texlive-newfloat-11:svn52906-71.fc40.noarch texlive-notoccite-11:svn18129.0-71.fc40.noarch texlive-ntgclass-11:svn65522-71.fc40.noarch texlive-oberdiek-11:svn65521-84.fc41.noarch texlive-pagesel-11:svn56105-71.fc40.noarch texlive-palatino-11:svn61719-71.fc40.noarch texlive-paralist-11:svn43021-71.fc40.noarch texlive-parallel-11:svn15878.0-71.fc40.noarch texlive-parskip-11:svn58358-71.fc40.noarch texlive-pdfcol-11:svn64469-71.fc40.noarch texlive-pdfcolfoot-11:svn65512-71.fc40.noarch texlive-pdfcolmk-11:svn52912-71.fc40.noarch texlive-pdfescape-11:svn53082-71.fc40.noarch texlive-pdflscape-11:svn64851-71.fc40.noarch texlive-pdfmanagement-testphase-11:svn66532-71.fc40.noarch texlive-pdfpages-11:svn65319-71.fc40.noarch texlive-pdftex-11:svn66243-84.fc41.s390x texlive-pdftexcmds-11:svn55777-71.fc40.noarch texlive-pgf-11:svn65553-71.fc40.noarch texlive-picture-11:svn54867-71.fc40.noarch texlive-placeins-11:svn19848.2.2-71.fc40.noarch texlive-plain-11:svn57963-71.fc40.noarch texlive-polyglossia-11:svn65792-71.fc40.noarch texlive-psfrag-11:svn15878.3.04-71.fc40.noarch texlive-pslatex-11:svn57434-71.fc40.noarch texlive-psnfss-11:svn54694-71.fc40.noarch texlive-pspicture-11:svn15878.0-71.fc40.noarch texlive-pst-3d-11:svn17257.1.10-71.fc40.noarch texlive-pst-coil-11:svn62977-71.fc40.noarch texlive-pst-eps-11:svn15878.1.0-71.fc40.noarch texlive-pst-fill-11:svn60671-71.fc40.noarch texlive-pst-grad-11:svn15878.1.06-71.fc40.noarch texlive-pst-math-11:svn64732-71.fc40.noarch texlive-pst-node-11:svn61838-71.fc40.noarch texlive-pst-ovl-11:svn54963-71.fc40.noarch texlive-pst-plot-11:svn65346-71.fc40.noarch texlive-pst-text-11:svn49542-71.fc40.noarch texlive-pst-tools-11:svn60621-71.fc40.noarch texlive-pst-tree-11:svn60421-71.fc40.noarch texlive-pstricks-11:svn65346-71.fc40.noarch texlive-pstricks-add-11:svn65067-71.fc40.noarch texlive-ragged2e-11:svn66152-71.fc40.noarch texlive-rcs-11:svn15878.0-71.fc40.noarch texlive-realscripts-11:svn56594-71.fc40.noarch texlive-refcount-11:svn53164-71.fc40.noarch texlive-rerunfilecheck-11:svn63869-71.fc40.noarch texlive-rsfs-11:svn15878.0-71.fc40.noarch texlive-sansmath-11:svn17997.1.1-71.fc40.noarch texlive-sansmathaccent-11:svn53628-71.fc40.noarch texlive-sauerj-11:svn15878.0-71.fc40.noarch texlive-section-11:svn20180.0-71.fc40.noarch texlive-seminar-11:svn59801-71.fc40.noarch texlive-sepnum-11:svn20186.2.0-71.fc40.noarch texlive-setspace-11:svn65206-71.fc40.noarch texlive-showexpl-11:svn57414-71.fc40.noarch texlive-stringenc-11:svn52982-71.fc40.noarch texlive-subfig-11:svn15878.1.3-71.fc40.noarch texlive-symbol-11:svn61719-71.fc40.noarch texlive-tex-11:svn66186-84.fc41.s390x texlive-tex-ini-files-11:svn40533-71.fc40.noarch texlive-texlive-common-doc-11:svn54176-71.fc40.noarch texlive-texlive-en-11:svn66572-84.fc41.noarch texlive-texlive-msg-translations-11:svn66593-71.fc40.noarch texlive-texlive-scripts-11:svn66584-84.fc41.noarch texlive-texlive.infra-11:svn66512-84.fc41.noarch texlive-textcase-11:svn63868-71.fc40.noarch texlive-thumbpdf-11:svn62518-84.fc41.noarch texlive-times-11:svn61719-71.fc40.noarch texlive-tipa-11:svn29349.1.3-71.fc40.noarch texlive-titlesec-11:svn59845-71.fc40.noarch texlive-tools-11:svn64892-71.fc40.noarch texlive-translator-11:svn59412-71.fc40.noarch texlive-transparent-11:svn64852-71.fc40.noarch texlive-typehtml-11:svn17134.0-71.fc40.noarch texlive-ucharcat-11:svn38907-71.fc40.noarch texlive-ucs-11:svn64114-71.fc40.noarch texlive-underscore-11:svn18261.0-71.fc40.noarch texlive-unicode-data-11:svn64423-71.fc40.noarch texlive-unicode-math-11:svn61719-71.fc40.noarch texlive-uniquecounter-11:svn53162-71.fc40.noarch texlive-url-11:svn32528.3.4-71.fc40.noarch texlive-utopia-11:svn15878.0-71.fc40.noarch texlive-varwidth-11:svn24104.0.92-71.fc40.noarch texlive-xcolor-11:svn63563-71.fc40.noarch texlive-xdvi-11:svn62387-84.fc41.s390x texlive-xetex-11:svn66203-84.fc41.s390x texlive-xetexconfig-11:svn45845-71.fc40.noarch texlive-xifthen-11:svn38929-71.fc40.noarch texlive-xkeyval-11:svn63616-71.fc40.noarch texlive-xltxtra-11:svn56594-71.fc40.noarch texlive-xpatch-11:svn54563-71.fc40.noarch texlive-xstring-11:svn65551-71.fc40.noarch texlive-xunicode-11:svn30466.0.981-71.fc40.noarch texlive-zapfding-11:svn61719-71.fc40.noarch texlive-zref-11:svn62977-71.fc40.noarch tk-1:8.6.14-1.fc41.s390x tk-devel-1:8.6.14-1.fc41.s390x tre-0.8.0-43.20140228gitc2f5d13.fc40.s390x tre-common-0.8.0-43.20140228gitc2f5d13.fc40.noarch tre-devel-0.8.0-43.20140228gitc2f5d13.fc40.s390x ttmkfdir-3.0.9-70.fc40.s390x tzdata-2024a-5.fc41.noarch tzdata-java-2024a-5.fc41.noarch urw-base35-bookman-fonts-20200910-20.fc41.noarch urw-base35-c059-fonts-20200910-20.fc41.noarch urw-base35-d050000l-fonts-20200910-20.fc41.noarch urw-base35-fonts-20200910-20.fc41.noarch urw-base35-fonts-common-20200910-20.fc41.noarch urw-base35-gothic-fonts-20200910-20.fc41.noarch urw-base35-nimbus-mono-ps-fonts-20200910-20.fc41.noarch urw-base35-nimbus-roman-fonts-20200910-20.fc41.noarch urw-base35-nimbus-sans-fonts-20200910-20.fc41.noarch urw-base35-p052-fonts-20200910-20.fc41.noarch urw-base35-standard-symbols-ps-fonts-20200910-20.fc41.noarch urw-base35-z003-fonts-20200910-20.fc41.noarch xdg-utils-1.2.1-1.fc41.noarch xml-common-0.6.3-63.fc40.noarch xorg-x11-fonts-Type1-7.5-38.fc40.noarch xorg-x11-proto-devel-2024.1-1.fc41.noarch xpdf-libs-1:4.05-3.fc41.s390x xz-devel-1:5.4.6-3.fc41.s390x zlib-ng-compat-devel-2.1.6-2.fc40.s390x zziplib-0.13.72-6.fc40.s390x Complete! Finish: build setup for R-affyio-1.66.0-7.fc41.src.rpm Start: rpmbuild R-affyio-1.66.0-7.fc41.src.rpm warning: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1714003200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DcYmbJ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf affyio + /usr/bin/mkdir -p affyio + cd affyio + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/affyio_1.66.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/affyio-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/affyio-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i '/Imports: zlibbioc/d' affyio/DESCRIPTION + sed -i '/import(zlibbioc)/d' affyio/NAMESPACE Patch #0 (affyio-fix-DESCRIPTION-Depends.patch): + echo 'Patch #0 (affyio-fix-DESCRIPTION-Depends.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fixdep --fuzz=0 patching file affyio/DESCRIPTION + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Bsh0MZ + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd affyio + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.P4UUP0 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x ++ dirname /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd affyio + rm -rf /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x + mkdir -p /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x/usr/lib64/R/library + R CMD INSTALL affyio -l /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x/usr/lib64/R/library * installing *source* package ‘affyio’ ... ** using staged installation checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for main in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes checking for pthread_create in -lpthread... yes checking if we can use pthreads... yes checking if PTHREAD_STACK_MIN is defined... yes configure: Enabling threading for affyio configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’ gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c fread_functions.c -o fread_functions.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c init_package.c -o init_package.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_abatch.c -o read_abatch.o read_abatch.c: In function ‘read_cel_file_intensities’: read_abatch.c:656:176: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 656 | Rprintf("Warning: found an empty line where not expected in %s.\nThis means that there is a cel intensity missing from the cel file.\nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:656:182: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 656 | Rprintf("Warning: found an empty line where not expected in %s.\nThis means that there is a cel intensity missing from the cel file.\nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:665:146: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:665:152: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:677:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:677:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:689:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:689:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘read_cel_file_stddev’: read_abatch.c:764:178: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 764 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:764:184: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 764 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:774:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 774 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:774:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 774 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:785:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 785 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:785:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 785 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:795:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 795 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:795:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 795 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:805:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 805 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:805:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 805 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘read_cel_file_npixels’: read_abatch.c:870:178: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 870 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:870:184: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 870 | Rprintf("Warning: found an empty line where not expected in %s.\n This means that there is a cel intensity missing from the cel file.\n Sucessfully read to cel intensity %d of %d expected\n", filename, i-1, i); | ~^ ~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:879:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 879 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:879:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 879 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:890:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 890 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:890:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 890 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:901:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 901 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:901:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 901 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:913:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 913 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:913:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 913 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:924:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 924 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:924:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 924 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘read_gzcel_file_intensities’: read_abatch.c:1567:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1567 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1567:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1567 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1578:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1578 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1578:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1578 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1589:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1589 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1589:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1589 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘read_gzcel_file_stddev’: read_abatch.c:1665:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1665:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1665 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1677:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1677:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1677 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1689:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1689:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1689 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1701:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1701 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1701:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1701 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘read_gzcel_file_npixels’: read_abatch.c:1769:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1769 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1769:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1769 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1780:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1780 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1780:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1780 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1791:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1791 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1791:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1791 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1801:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1801 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1801:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1801 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1811:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1811 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c:1811:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1811 | Rprintf("Warning: found an incomplete line where not expected in %s.\nThe CEL file may be truncated. \nSucessfully read to cel intensity %d of %d expected\n", filename, i-1, rows); | ~^ ~~~~ | | | | int size_t {aka long unsigned int} | %ld read_abatch.c: In function ‘gzbinary_get_detailed_header_info’: read_abatch.c:3410:3: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 3410 | strncpy(header_info->AlgorithmParameters,my_header->alg_param,strlen(my_header->alg_param)-1); | ^ read_abatch.c:3410:65: note: length computed here 3410 | strncpy(header_info->AlgorithmParameters,my_header->alg_param,strlen(my_header->alg_param)-1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_abatch.c: In function ‘binary_get_detailed_header_info’: read_abatch.c:2661:3: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] 2661 | strncpy(header_info->AlgorithmParameters,my_header->alg_param,strlen(my_header->alg_param)-1); | ^ read_abatch.c:2661:65: note: length computed here 2661 | strncpy(header_info->AlgorithmParameters,my_header->alg_param,strlen(my_header->alg_param)-1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_bpmap.c -o read_bpmap.o read_bpmap.c: In function ‘ReadBPMAPFileIntoRList’: read_bpmap.c:849:39: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘SEXP’ {aka ‘struct SEXPREC *’} [-Wformat=] 849 | error("Unable to open the file %s",filename); | ~^ ~~~~~~~~ | | | | | SEXP {aka struct SEXPREC *} | char * read_bpmap.c:698:27: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 698 | sprintf(buf, "%d", j+1); | ^ In file included from /usr/include/stdio.h:980, from /usr/include/R/R.h:44, from read_bpmap.c:23: In function ‘sprintf’, inlined from ‘readBPMAPSeqIdPositionInfo’ at read_bpmap.c:698:4, inlined from ‘ReadBPMAPFileIntoRList’ at read_bpmap.c:873:3: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 2 and 11 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ read_bpmap.c: In function ‘ReadBPMAPFileIntoRList’: read_bpmap.c:655:27: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 655 | sprintf(buf, "%d", j+1); | ^ In function ‘sprintf’, inlined from ‘readBPMAPSeqIdPositionInfo’ at read_bpmap.c:655:4, inlined from ‘ReadBPMAPFileIntoRList’ at read_bpmap.c:873:3: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 2 and 11 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ read_bpmap.c: In function ‘ReadBPMAPFileIntoRList’: read_bpmap.c:603:25: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 603 | sprintf(buf, "%d", j+1); | ^ In function ‘sprintf’, inlined from ‘readBPMAPSeqIdPositionInfo’ at read_bpmap.c:603:2, inlined from ‘ReadBPMAPFileIntoRList’ at read_bpmap.c:873:3: /usr/include/bits/stdio2.h:30:10: note: ‘__sprintf_chk’ output between 2 and 11 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_cdf_xda.c -o read_cdf_xda.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_cdffile2.c -o read_cdffile2.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_celfile_generic.c -o read_celfile_generic.o read_celfile_generic.c: In function ‘generic_get_detailed_header_info’: read_celfile_generic.c:272:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 272 | strncpy(header_info->AlgorithmParameters,"Percentile:",11); | ^ read_celfile_generic.c:294:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 294 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"CellMargin:",11); | ^ read_celfile_generic.c:315:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] 315 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"OutlierHigh:",12); | ^ read_celfile_generic.c:336:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 336 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"OutlierLow:",11); | ^ read_celfile_generic.c:357:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 357 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"AlgVersion:",11); | ^ read_celfile_generic.c:378:3: warning: ‘strncpy’ output truncated before terminating nul copying 14 bytes from a string of the same length [-Wstringop-truncation] 378 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FixedCellSize:",14); | ^ read_celfile_generic.c:399:3: warning: ‘strncpy’ output truncated before terminating nul copying 17 bytes from a string of the same length [-Wstringop-truncation] 399 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FullFeatureWidth:",17); | ^ read_celfile_generic.c:420:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] 420 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FullFeatureHeight:",18); | ^ read_celfile_generic.c:441:3: warning: ‘strncpy’ output truncated before terminating nul copying 26 bytes from a string of the same length [-Wstringop-truncation] 441 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"IgnoreOutliersInShiftRows:",26); | ^ read_celfile_generic.c:464:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] 464 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FeatureExtraction:",18); | ^ read_celfile_generic.c:488:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] 488 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"PoolWidthExtenstion:",20); | ^ read_celfile_generic.c:510:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] 510 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"PoolHeightExtension:",20); | ^ read_celfile_generic.c:532:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] 532 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"UseSubgrids:",12); | ^ read_celfile_generic.c:553:3: warning: ‘strncpy’ output truncated before terminating nul copying 16 bytes from a string of the same length [-Wstringop-truncation] 553 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"RandomizePixels:",16); | ^ read_celfile_generic.c:575:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 575 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"ErrorBasis:",11); | ^ read_celfile_generic.c:597:3: warning: ‘strncpy’ output truncated before terminating nul copying 8 bytes from a string of the same length [-Wstringop-truncation] 597 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"StdMult:",8); | ^ read_celfile_generic.c: In function ‘gzgeneric_get_detailed_header_info’: read_celfile_generic.c:1270:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 1270 | strncpy(header_info->AlgorithmParameters,"Percentile:",11); | ^ read_celfile_generic.c:1292:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 1292 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"CellMargin:",11); | ^ read_celfile_generic.c:1313:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] 1313 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"OutlierHigh:",12); | ^ read_celfile_generic.c:1334:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 1334 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"OutlierLow:",11); | ^ read_celfile_generic.c:1355:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 1355 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"AlgVersion:",11); | ^ read_celfile_generic.c:1376:3: warning: ‘strncpy’ output truncated before terminating nul copying 14 bytes from a string of the same length [-Wstringop-truncation] 1376 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FixedCellSize:",14); | ^ read_celfile_generic.c:1397:3: warning: ‘strncpy’ output truncated before terminating nul copying 17 bytes from a string of the same length [-Wstringop-truncation] 1397 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FullFeatureWidth:",17); | ^ read_celfile_generic.c:1418:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] 1418 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FullFeatureHeight:",18); | ^ read_celfile_generic.c:1439:3: warning: ‘strncpy’ output truncated before terminating nul copying 26 bytes from a string of the same length [-Wstringop-truncation] 1439 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"IgnoreOutliersInShiftRows:",26); | ^ read_celfile_generic.c:1462:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] 1462 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"FeatureExtraction:",18); | ^ read_celfile_generic.c:1486:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] 1486 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"PoolWidthExtenstion:",20); | ^ read_celfile_generic.c:1508:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] 1508 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"PoolHeightExtension:",20); | ^ read_celfile_generic.c:1530:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] 1530 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"UseSubgrids:",12); | ^ read_celfile_generic.c:1551:3: warning: ‘strncpy’ output truncated before terminating nul copying 16 bytes from a string of the same length [-Wstringop-truncation] 1551 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"RandomizePixels:",16); | ^ read_celfile_generic.c:1573:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] 1573 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"ErrorBasis:",11); | ^ read_celfile_generic.c:1595:3: warning: ‘strncpy’ output truncated before terminating nul copying 8 bytes from a string of the same length [-Wstringop-truncation] 1595 | strncpy(&header_info->AlgorithmParameters[algorithm_paramsize],"StdMult:",8); | ^ gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_clf.c -o read_clf.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_generic.c -o read_generic.o read_generic.c: In function ‘print_decode_nvt_triplet’: read_generic.c:1293:37: warning: format ‘%f’ expects argument of type ‘double’, but argument 2 has type ‘int’ [-Wformat=] 1293 | Rprintf("Its a float value is %f\n",temp32); | ~^ ~~~~~~ | | | | | int | double | %d gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_multichannel_celfile_generic.c -o read_multichannel_celfile_generic.o gcc -I"/usr/include/R" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_ZLIB=1 -DHAVE_LIBPTHREAD=1 -DUSE_PTHREADS=1 -I/usr/local/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -c read_pgf.c -o read_pgf.o read_pgf.c:363:12: warning: ‘token_ends_with’ defined but not used [-Wunused-function] 363 | static int token_ends_with(char *token, char *ends_in){ | ^~~~~~~~~~~~~~~ gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o affyio.so fread_functions.o init_package.o read_abatch.o read_bpmap.o read_cdf_xda.o read_cdffile2.o read_celfile_generic.o read_clf.o read_generic.o read_multichannel_celfile_generic.o read_pgf.o -lpthread -lz -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x/usr/lib64/R/library/00LOCK-affyio/00new/affyio/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘affyio’ finding HTML links ... done affyio-internal html check.cdf.type html get.celfile.dates html read.cdffile.list html read.celfile html read.celfile.header html read.celfile.probeintensity.matrices html read_abatch html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (affyio) + test -d affyio/src + cd affyio/src + rm -f fread_functions.o init_package.o read_abatch.o read_bpmap.o read_cdf_xda.o read_cdffile2.o read_celfile_generic.o read_clf.o read_generic.o read_multichannel_celfile_generic.o read_pgf.o affyio.so + rm -rf /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x/usr/lib64/R/library/R.css + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.66.0-7.fc41 --unique-debug-suffix -1.66.0-7.fc41.s390x --unique-debug-src-base R-affyio-1.66.0-7.fc41.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/affyio find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-affyio-1.66.0-7.fc41.s390x 1084 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.3jiSiO + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd affyio + /usr/bin/R CMD check affyio * using log directory ‘/builddir/build/BUILD/affyio/affyio.Rcheck’ * using R version 4.4.0 (2024-04-24) * using platform: s390x-redhat-linux-gnu * R was compiled by gcc (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0) GNU Fortran (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0) * running under: Fedora Linux 41 (Rawhide Prerelease) * using session charset: UTF-8 * checking for file ‘affyio/DESCRIPTION’ ... OK * this is package ‘affyio’ version ‘1.66.0’ * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.19/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.19/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.19/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.19/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.19/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.19/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘affyio’ can be installed ... WARNING Found the following significant warnings: read_abatch.c:656:176: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:656:182: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:665:146: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:665:152: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:677:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:677:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:689:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:689:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:764:178: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:764:184: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:774:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:774:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:785:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:785:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:795:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:795:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:805:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:805:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:870:178: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:870:184: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:879:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:879:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:890:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:890:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:901:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:901:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:913:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:913:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:924:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:924:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1567:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1567:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1578:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1578:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1589:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1589:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1665:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1665:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1677:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1677:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1689:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1689:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1701:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1701:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1769:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1769:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1780:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1780:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1791:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1791:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1801:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1801:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1811:145: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:1811:151: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] read_abatch.c:3410:3: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] read_abatch.c:2661:3: warning: ‘strncpy’ specified bound depends on the length of the source argument [-Wstringop-truncation] read_bpmap.c:849:39: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘SEXP’ {aka ‘struct SEXPREC *’} [-Wformat=] read_bpmap.c:698:27: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] read_bpmap.c:655:27: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] read_bpmap.c:603:25: warning: ‘__sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] read_celfile_generic.c:272:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:294:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:315:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:336:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:357:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:378:3: warning: ‘strncpy’ output truncated before terminating nul copying 14 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:399:3: warning: ‘strncpy’ output truncated before terminating nul copying 17 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:420:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:441:3: warning: ‘strncpy’ output truncated before terminating nul copying 26 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:464:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:488:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:510:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:532:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:553:3: warning: ‘strncpy’ output truncated before terminating nul copying 16 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:575:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:597:3: warning: ‘strncpy’ output truncated before terminating nul copying 8 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1270:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1292:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1313:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1334:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1355:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1376:3: warning: ‘strncpy’ output truncated before terminating nul copying 14 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1397:3: warning: ‘strncpy’ output truncated before terminating nul copying 17 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1418:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1439:3: warning: ‘strncpy’ output truncated before terminating nul copying 26 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1462:3: warning: ‘strncpy’ output truncated before terminating nul copying 18 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1486:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1508:3: warning: ‘strncpy’ output truncated before terminating nul copying 20 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1530:3: warning: ‘strncpy’ output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1551:3: warning: ‘strncpy’ output truncated before terminating nul copying 16 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1573:3: warning: ‘strncpy’ output truncated before terminating nul copying 11 bytes from a string of the same length [-Wstringop-truncation] read_celfile_generic.c:1595:3: warning: ‘strncpy’ output truncated before terminating nul copying 8 bytes from a string of the same length [-Wstringop-truncation] read_generic.c:1293:37: warning: format ‘%f’ expects argument of type ‘double’, but argument 2 has type ‘int’ [-Wformat=] See ‘/builddir/build/BUILD/affyio/affyio.Rcheck/00install.out’ for details. * used C compiler: ‘gcc (GCC) 14.0.1 20240411 (Red Hat 14.0.1-0)’ * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Found a ‘configure.in’ file: ‘configure.ac’ has long been preferred. * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Unknown package ‘makecdfenv’ in Rd xrefs * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... NOTE Package has both ‘src/Makevars.in’ and ‘src/Makevars’. Installation with --no-configure' is unlikely to work. If you intended ‘src/Makevars’ to be used on Windows, rename it to ‘src/Makevars.win’ otherwise remove it. If ‘configure’ created ‘src/Makevars’, you need a ‘cleanup’ script. * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking examples ... NONE * checking PDF version of manual ... WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! LaTeX Error: File `inconsolata.sty' not found. Type X to quit or to proceed, or enter new name. (Default extension: sty) ! Emergency stop. l.326 ^^M ! ==> Fatal error occurred, no output PDF file produced! * checking PDF version of manual without index ... OK * DONE Status: 2 WARNINGs, 3 NOTEs See ‘/builddir/build/BUILD/affyio/affyio.Rcheck/00check.log’ for details. + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-affyio-1.66.0-7.fc41.s390x Provides: R(affyio) = 1.66.0 R-affyio = 1.66.0-7.fc41 R-affyio(s390-64) = 1.66.0-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.4 R(methods) R-core >= 2.6.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.2)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.4)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: R-affyio-debugsource-1.66.0-7.fc41.s390x Provides: R-affyio-debugsource = 1.66.0-7.fc41 R-affyio-debugsource(s390-64) = 1.66.0-7.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-affyio-debuginfo-1.66.0-7.fc41.s390x Provides: R-affyio-debuginfo = 1.66.0-7.fc41 R-affyio-debuginfo(s390-64) = 1.66.0-7.fc41 debuginfo(build-id) = 19a230cd2268e027445643329a3fd3b3df24d968 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-affyio-debugsource(s390-64) = 1.66.0-7.fc41 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x Wrote: /builddir/build/RPMS/R-affyio-debuginfo-1.66.0-7.fc41.s390x.rpm Wrote: /builddir/build/RPMS/R-affyio-debugsource-1.66.0-7.fc41.s390x.rpm Wrote: /builddir/build/RPMS/R-affyio-1.66.0-7.fc41.s390x.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.9l9CdS + umask 022 + cd /builddir/build/BUILD + cd affyio + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-affyio-1.66.0-7.fc41.s390x + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.4ClC8B + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/affyio-SPECPARTS + rm -rf affyio affyio.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %patchN is deprecated (1 usages found), use %patch N (or %patch -P N) Finish: rpmbuild R-affyio-1.66.0-7.fc41.src.rpm Finish: build phase for R-affyio-1.66.0-7.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.log /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1714080096.984571/root/var/log/dnf.rpm.log INFO: Done(/var/lib/copr-rpmbuild/results/R-affyio-1.66.0-7.fc41.src.rpm) Config(child) 2 minutes 28 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-affyio-debugsource", "epoch": null, "version": "1.66.0", "release": "7.fc41", "arch": "s390x" }, { "name": "R-affyio-debuginfo", "epoch": null, "version": "1.66.0", "release": "7.fc41", "arch": "s390x" }, { "name": "R-affyio", "epoch": null, "version": "1.66.0", "release": "7.fc41", "arch": "src" }, { "name": "R-affyio", "epoch": null, "version": "1.66.0", "release": "7.fc41", "arch": "s390x" } ] } RPMResults finished