Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c15b' (ED25519) to the list of known hosts. INFO: Calling: curl -H Pragma: -o BiocIO_1.6.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-BiocIO/BiocIO_1.6.0.tar.gz/md5/8668bb4b5aa3b14295ccba8cd3d4dc33/BiocIO_1.6.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 223k 100 223k 0 0 3273k 0 --:--:-- --:--:-- --:--:-- 3291k INFO: Reading stdout from command: md5sum BiocIO_1.6.0.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO/R-BiocIO.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714051623.995958 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.5 starting (python version = 3.12.1, NVR = mock-5.5-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO/R-BiocIO.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1714051623.995958 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO/R-BiocIO.spec) Config(fedora-39-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 5.5 INFO: Mock Version: 5.5 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051623.995958/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-x86_64-bootstrap-1714051623.995958/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/98164f21fee5ab545da2166f64f2d857f2f9a2f123223e453df07d451c9acd05/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/98164f21fee5ab545da2166f64f2d857f2f9a2f123223e453df07d451c9acd05/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 19 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 34 MB/s | 75 MB 00:02 fedora 18 MB/s | 89 MB 00:05 updates 17 MB/s | 35 MB 00:02 Last metadata expiration check: 0:00:03 ago on Thu Apr 25 13:27:55 2024. Package python3-dnf-4.19.2-1.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: python3-dnf-plugins-core noarch 4.6.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 491 k dnf-data noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k python3-dnf noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 553 k yum noarch 4.19.2-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs x86_64 1:1.14.10-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 156 k python3-dateutil noarch 1:2.8.2-13.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus x86_64 1.3.2-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145 k python3-distro noarch 1.9.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 45 k python3-six noarch 1.16.0-14.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd x86_64 235-9.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k Transaction Summary ========================================================================================================================= Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dateutil-2.8.2-13.fc40.noarch.r 3.8 MB/s | 345 kB 00:00 (2/11): python3-dbus-1.3.2-6.fc40.x86_64.rpm 1.6 MB/s | 145 kB 00:00 (3/11): dbus-libs-1.14.10-3.fc40.x86_64.rpm 1.5 MB/s | 156 kB 00:00 (4/11): python3-distro-1.9.0-3.fc40.noarch.rpm 2.6 MB/s | 45 kB 00:00 (5/11): python3-dnf-plugins-core-4.6.0-1.fc41.n 15 MB/s | 302 kB 00:00 (6/11): python3-six-1.16.0-14.fc40.noarch.rpm 2.1 MB/s | 41 kB 00:00 (7/11): python3-systemd-235-9.fc40.x86_64.rpm 5.3 MB/s | 100 kB 00:00 (8/11): dnf-4.19.2-1.fc41.noarch.rpm 22 MB/s | 491 kB 00:00 (9/11): dnf-data-4.19.2-1.fc41.noarch.rpm 2.1 MB/s | 40 kB 00:00 (10/11): yum-4.19.2-1.fc41.noarch.rpm 1.7 MB/s | 37 kB 00:00 (11/11): python3-dnf-4.19.2-1.fc41.noarch.rpm 18 MB/s | 553 kB 00:00 -------------------------------------------------------------------------------- Total 14 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.19.2-1.fc41.noarch 1/15 Upgrading : python3-dnf-4.19.2-1.fc41.noarch 2/15 Upgrading : dnf-4.19.2-1.fc41.noarch 3/15 Running scriptlet: dnf-4.19.2-1.fc41.noarch 3/15 Installing : python3-systemd-235-9.fc40.x86_64 4/15 Installing : python3-six-1.16.0-14.fc40.noarch 5/15 Installing : python3-dateutil-1:2.8.2-13.fc40.noarch 6/15 Installing : python3-distro-1.9.0-3.fc40.noarch 7/15 Installing : dbus-libs-1:1.14.10-3.fc40.x86_64 8/15 Installing : python3-dbus-1.3.2-6.fc40.x86_64 9/15 Installing : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 10/15 Upgrading : yum-4.19.2-1.fc41.noarch 11/15 Cleanup : yum-4.19.2-1.fc39.noarch 12/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : dnf-4.19.2-1.fc39.noarch 13/15 Running scriptlet: dnf-4.19.2-1.fc39.noarch 13/15 Cleanup : python3-dnf-4.19.2-1.fc39.noarch 14/15 Cleanup : dnf-data-4.19.2-1.fc39.noarch 15/15 Running scriptlet: dnf-data-4.19.2-1.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-3.fc40.x86_64 1/15 Verifying : python3-dateutil-1:2.8.2-13.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-6.fc40.x86_64 3/15 Verifying : python3-distro-1.9.0-3.fc40.noarch 4/15 Verifying : python3-dnf-plugins-core-4.6.0-1.fc41.noarch 5/15 Verifying : python3-six-1.16.0-14.fc40.noarch 6/15 Verifying : python3-systemd-235-9.fc40.x86_64 7/15 Verifying : dnf-4.19.2-1.fc41.noarch 8/15 Verifying : dnf-4.19.2-1.fc39.noarch 9/15 Verifying : dnf-data-4.19.2-1.fc41.noarch 10/15 Verifying : dnf-data-4.19.2-1.fc39.noarch 11/15 Verifying : python3-dnf-4.19.2-1.fc41.noarch 12/15 Verifying : python3-dnf-4.19.2-1.fc39.noarch 13/15 Verifying : yum-4.19.2-1.fc41.noarch 14/15 Verifying : yum-4.19.2-1.fc39.noarch 15/15 Upgraded: dnf-4.19.2-1.fc41.noarch dnf-data-4.19.2-1.fc41.noarch python3-dnf-4.19.2-1.fc41.noarch yum-4.19.2-1.fc41.noarch Installed: dbus-libs-1:1.14.10-3.fc40.x86_64 python3-dateutil-1:2.8.2-13.fc40.noarch python3-dbus-1.3.2-6.fc40.x86_64 python3-distro-1.9.0-3.fc40.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch python3-six-1.16.0-14.fc40.noarch python3-systemd-235-9.fc40.x86_64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1714051623.995958/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 22 MB/s | 18 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 38 MB/s | 75 MB 00:01 fedora 12 MB/s | 89 MB 00:07 updates 15 MB/s | 35 MB 00:02 Last metadata expiration check: 0:00:03 ago on Thu Apr 25 13:29:04 2024. Dependencies resolved. ======================================================================================================================================== Package Arch Version Repository Size ======================================================================================================================================== Installing group/module packages: bash x86_64 5.2.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 x86_64 1.0.8-18.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k coreutils x86_64 9.5-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M cpio x86_64 2.15-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 285 k diffutils x86_64 3.10-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397 k fedora-release-common noarch 41-0.9 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k findutils x86_64 1:4.9.0-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 482 k gawk x86_64 5.3.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack x86_64 2.39.9000-14.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 110 k grep x86_64 3.11-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 290 k gzip x86_64 1.13-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 164 k info x86_64 7.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 182 k patch x86_64 2.7.6-24.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131 k redhat-rpm-config noarch 288-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 75 k rpm-build x86_64 4.19.1.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 70 k sed x86_64 4.9-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309 k shadow-utils x86_64 2:4.15.1-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M tar x86_64 2:1.35-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 847 k unzip x86_64 6.0-63.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k util-linux x86_64 2.40-13.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M which x86_64 2.21-41.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k xz x86_64 1:5.4.6-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 532 k Installing dependencies: alternatives x86_64 1.26-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 40 k ansible-srpm-macros noarch 1-15.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs x86_64 4.0.1-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 126 k authselect x86_64 1.5.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k authselect-libs x86_64 1.5.0-5.fc41 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======================================================================================================================================== Install 153 Packages Total download size: 52 M Installed size: 179 M Downloading Packages: (1/153): ansible-srpm-macros-1-15.fc41.noarch.r 95 kB/s | 21 kB 00:00 (2/153): alternatives-1.26-3.fc40.x86_64.rpm 164 kB/s | 40 kB 00:00 (3/153): audit-libs-4.0.1-1.fc41.x86_64.rpm 3.4 MB/s | 126 kB 00:00 (4/153): authselect-1.5.0-5.fc41.x86_64.rpm 4.0 MB/s | 141 kB 00:00 (5/153): authselect-libs-1.5.0-5.fc41.x86_64.rp 6.8 MB/s | 205 kB 00:00 (6/153): basesystem-11-20.fc40.noarch.rpm 242 kB/s | 7.2 kB 00:00 (7/153): bash-5.2.26-3.fc40.x86_64.rpm 32 MB/s | 1.8 MB 00:00 (8/153): binutils-gold-2.42.50-6.fc41.x86_64.rp 19 MB/s | 783 kB 00:00 (9/153): gdb-minimal-14.2-5.fc41.x86_64.rpm 10 MB/s | 4.3 MB 00:00 (10/153): bzip2-1.0.8-18.fc40.x86_64.rpm 1.9 MB/s | 52 kB 00:00 (11/153): ca-certificates-2023.2.62_v7.0.401-6. 28 MB/s | 862 kB 00:00 (12/153): 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qt6-srpm-macros-6.7.0-1.fc41.noarch. 228 kB/s | 9.0 kB 00:00 (130/153): redhat-rpm-config-288-1.fc41.noarch. 2.4 MB/s | 75 kB 00:00 (131/153): rpm-build-4.19.1.1-1.fc40.x86_64.rpm 3.8 MB/s | 70 kB 00:00 (132/153): rpm-4.19.1.1-1.fc40.x86_64.rpm 13 MB/s | 512 kB 00:00 (133/153): rpm-libs-4.19.1.1-1.fc40.x86_64.rpm 13 MB/s | 309 kB 00:00 (134/153): rpm-build-libs-4.19.1.1-1.fc40.x86_6 3.4 MB/s | 95 kB 00:00 (135/153): rust-srpm-macros-26.2-1.fc41.noarch. 572 kB/s | 13 kB 00:00 (136/153): sed-4.9-1.fc40.x86_64.rpm 12 MB/s | 309 kB 00:00 (137/153): rpm-sequoia-1.6.0-2.fc40.x86_64.rpm 20 MB/s | 847 kB 00:00 (138/153): setup-2.14.5-2.fc40.noarch.rpm 7.5 MB/s | 148 kB 00:00 (139/153): systemd-libs-255.5-1.fc41.x86_64.rpm 20 MB/s | 706 kB 00:00 (140/153): sqlite-libs-3.45.2-1.fc41.x86_64.rpm 13 MB/s | 706 kB 00:00 (141/153): shadow-utils-4.15.1-2.fc41.x86_64.rp 22 MB/s | 1.3 MB 00:00 (142/153): unzip-6.0-63.fc40.x86_64.rpm 8.5 MB/s | 185 kB 00:00 (143/153): tar-1.35-3.fc40.x86_64.rpm 23 MB/s | 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Running transaction test Transaction test succeeded. 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util-linux-2.40-13.fc41.x86_64 151/153 Running scriptlet: util-linux-2.40-13.fc41.x86_64 151/153 Installing : which-2.21-41.fc40.x86_64 152/153 Installing : info-7.1-2.fc40.x86_64 153/153 Running scriptlet: filesystem-3.18-9.fc41.x86_64 153/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch 153/153 Running scriptlet: authselect-libs-1.5.0-5.fc41.x86_64 153/153 Running scriptlet: rpm-4.19.1.1-1.fc40.x86_64 153/153 Running scriptlet: info-7.1-2.fc40.x86_64 153/153 Installed: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-6.fc41.x86_64 binutils-gold-2.42.50-6.fc41.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-1:4.9.0-8.fc40.x86_64 fonts-srpm-macros-1:2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-5.fc41.x86_64 gdbm-1:1.23-6.fc40.x86_64 gdbm-libs-1:1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.x86_64 glibc-common-2.39.9000-14.fc41.x86_64 glibc-gconv-extra-2.39.9000-14.fc41.x86_64 glibc-minimal-langpack-2.39.9000-14.fc41.x86_64 gmp-1:6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.7.1-1.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.0.1-0.15.fc41.x86_64 libgomp-14.0.1-0.15.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc41.x86_64 libnghttp2-1.61.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-1:3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.x86_64 pam-libs-1.6.1-1.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-1.fc41.x86_64 pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-2:4.15.1-2.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.5-1.fc41.x86_64 tar-2:1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc41.x86_64 util-linux-core-2.40-13.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-1:5.4.6-3.fc41.x86_64 xz-libs-1:5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc41.x86_64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.26-3.fc40.x86_64 ansible-srpm-macros-1-15.fc41.noarch audit-libs-4.0.1-1.fc41.x86_64 authselect-1.5.0-5.fc41.x86_64 authselect-libs-1.5.0-5.fc41.x86_64 basesystem-11-20.fc40.noarch bash-5.2.26-3.fc40.x86_64 binutils-2.42.50-6.fc41.x86_64 binutils-gold-2.42.50-6.fc41.x86_64 bzip2-1.0.8-18.fc40.x86_64 bzip2-libs-1.0.8-18.fc40.x86_64 ca-certificates-2023.2.62_v7.0.401-6.fc40.noarch coreutils-9.5-1.fc41.x86_64 coreutils-common-9.5-1.fc41.x86_64 cpio-2.15-1.fc40.x86_64 cracklib-2.9.11-5.fc40.x86_64 crypto-policies-20240320-1.git58e3d95.fc41.noarch curl-8.7.1-1.fc41.x86_64 cyrus-sasl-lib-2.1.28-19.fc40.x86_64 debugedit-5.0-14.fc40.x86_64 diffutils-3.10-5.fc40.x86_64 dwz-0.15-6.fc40.x86_64 ed-1.20.2-1.fc41.x86_64 efi-srpm-macros-5-11.fc40.noarch elfutils-0.191-7.fc41.x86_64 elfutils-debuginfod-client-0.191-7.fc41.x86_64 elfutils-default-yama-scope-0.191-7.fc41.noarch elfutils-libelf-0.191-7.fc41.x86_64 elfutils-libs-0.191-7.fc41.x86_64 fedora-gpg-keys-41-0.1.noarch fedora-release-41-0.9.noarch fedora-release-common-41-0.9.noarch fedora-release-identity-basic-41-0.9.noarch fedora-repos-41-0.1.noarch fedora-repos-rawhide-41-0.1.noarch file-5.45-5.fc41.x86_64 file-libs-5.45-5.fc41.x86_64 filesystem-3.18-9.fc41.x86_64 findutils-4.9.0-8.fc40.x86_64 fonts-srpm-macros-2.0.5-14.fc40.noarch forge-srpm-macros-0.3.1-1.fc41.noarch fpc-srpm-macros-1.3-12.fc40.noarch gawk-5.3.0-3.fc40.x86_64 gdb-minimal-14.2-5.fc41.x86_64 gdbm-1.23-6.fc40.x86_64 gdbm-libs-1.23-6.fc40.x86_64 ghc-srpm-macros-1.9.1-1.fc41.noarch glibc-2.39.9000-14.fc41.x86_64 glibc-common-2.39.9000-14.fc41.x86_64 glibc-gconv-extra-2.39.9000-14.fc41.x86_64 glibc-minimal-langpack-2.39.9000-14.fc41.x86_64 gmp-6.3.0-1.fc41.x86_64 gnat-srpm-macros-6-5.fc40.noarch go-srpm-macros-3.6.0-1.fc41.noarch grep-3.11-7.fc40.x86_64 gzip-1.13-1.fc40.x86_64 info-7.1-2.fc40.x86_64 jansson-2.13.1-9.fc40.x86_64 kernel-srpm-macros-1.0-23.fc41.noarch keyutils-libs-1.6.3-3.fc40.x86_64 krb5-libs-1.21.2-5.fc40.x86_64 libacl-2.3.2-1.fc40.x86_64 libarchive-3.7.2-3.fc41.x86_64 libattr-2.5.2-3.fc40.x86_64 libblkid-2.40-13.fc41.x86_64 libbrotli-1.1.0-3.fc40.x86_64 libcap-2.69-8.fc41.x86_64 libcap-ng-0.8.5-1.fc41.x86_64 libcom_err-1.47.0-5.fc40.x86_64 libcurl-8.7.1-1.fc41.x86_64 libeconf-0.6.2-1.fc41.x86_64 libevent-2.1.12-12.fc40.x86_64 libfdisk-2.40-13.fc41.x86_64 libffi-3.4.6-1.fc41.x86_64 libgcc-14.0.1-0.15.fc41.x86_64 libgomp-14.0.1-0.15.fc41.x86_64 libidn2-2.3.7-1.fc40.x86_64 libmount-2.40-13.fc41.x86_64 libnghttp2-1.61.0-1.fc41.x86_64 libnsl2-2.0.1-1.fc40.x86_64 libpkgconf-2.1.0-1.fc40.x86_64 libpsl-0.21.5-3.fc40.x86_64 libpwquality-1.4.5-9.fc40.x86_64 libselinux-3.6-4.fc40.x86_64 libsemanage-3.6-3.fc40.x86_64 libsepol-3.6-3.fc40.x86_64 libsmartcols-2.40-13.fc41.x86_64 libssh-0.10.6-6.fc41.x86_64 libssh-config-0.10.6-6.fc41.noarch libstdc++-14.0.1-0.15.fc41.x86_64 libtasn1-4.19.0-6.fc40.x86_64 libtirpc-1.3.4-1.rc3.fc41.x86_64 libtool-ltdl-2.4.7-10.fc40.x86_64 libunistring-1.1-7.fc41.x86_64 libutempter-1.2.1-13.fc40.x86_64 libuuid-2.40-13.fc41.x86_64 libverto-0.3.2-8.fc40.x86_64 libxcrypt-4.4.36-5.fc40.x86_64 libxml2-2.12.6-1.fc41.x86_64 libzstd-1.5.6-1.fc41.x86_64 lua-libs-5.4.6-5.fc40.x86_64 lua-srpm-macros-1-13.fc40.noarch lz4-libs-1.9.4-6.fc40.x86_64 mpfr-4.2.1-3.fc40.x86_64 ncurses-base-6.4-12.20240127.fc40.noarch ncurses-libs-6.4-12.20240127.fc40.x86_64 ocaml-srpm-macros-9-3.fc40.noarch openblas-srpm-macros-2-17.fc41.noarch openldap-2.6.7-1.fc40.x86_64 openssl-libs-3.2.1-6.fc41.x86_64 p11-kit-0.25.3-4.fc40.x86_64 p11-kit-trust-0.25.3-4.fc40.x86_64 package-notes-srpm-macros-0.5-11.fc40.noarch pam-1.6.1-1.fc41.x86_64 pam-libs-1.6.1-1.fc41.x86_64 patch-2.7.6-24.fc40.x86_64 pcre2-10.43-1.fc41.x86_64 pcre2-syntax-10.43-1.fc41.noarch perl-srpm-macros-1-53.fc40.noarch pkgconf-2.1.0-1.fc40.x86_64 pkgconf-m4-2.1.0-1.fc40.noarch pkgconf-pkg-config-2.1.0-1.fc40.x86_64 popt-1.19-6.fc40.x86_64 publicsuffix-list-dafsa-20240107-3.fc40.noarch pyproject-srpm-macros-1.12.0-1.fc40.noarch python-srpm-macros-3.12-9.fc41.noarch qt5-srpm-macros-5.15.13-1.fc41.noarch qt6-srpm-macros-6.7.0-1.fc41.noarch readline-8.2-8.fc40.x86_64 redhat-rpm-config-288-1.fc41.noarch rpm-4.19.1.1-1.fc40.x86_64 rpm-build-4.19.1.1-1.fc40.x86_64 rpm-build-libs-4.19.1.1-1.fc40.x86_64 rpm-libs-4.19.1.1-1.fc40.x86_64 rpm-sequoia-1.6.0-2.fc40.x86_64 rust-srpm-macros-26.2-1.fc41.noarch sed-4.9-1.fc40.x86_64 setup-2.14.5-2.fc40.noarch shadow-utils-4.15.1-2.fc41.x86_64 sqlite-libs-3.45.2-1.fc41.x86_64 systemd-libs-255.5-1.fc41.x86_64 tar-1.35-3.fc40.x86_64 unzip-6.0-63.fc40.x86_64 util-linux-2.40-13.fc41.x86_64 util-linux-core-2.40-13.fc41.x86_64 which-2.21-41.fc40.x86_64 xxhash-libs-0.8.2-2.fc40.x86_64 xz-5.4.6-3.fc41.x86_64 xz-libs-5.4.6-3.fc41.x86_64 zig-srpm-macros-1-2.fc40.noarch zip-3.0-40.fc40.x86_64 zlib-ng-compat-2.1.6-2.fc40.x86_64 zstd-1.5.6-1.fc41.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-BiocIO-1.6.0-8.fc41.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.log /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.rpm.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-xu6py8qj/R-BiocIO/R-BiocIO.spec) Config(child) 2 minutes 25 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-BiocIO-1.6.0-8.fc41.src.rpm) Config(fedora-39-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051623.995958/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-x86_64-bootstrap-1714051623.995958/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-x86_64-1714051623.995958/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.1.1-1.fc39.x86_64 rpm-sequoia-1.6.0-1.fc39.x86_64 python3-dnf-4.19.2-1.fc41.noarch python3-dnf-plugins-core-4.6.0-1.fc41.noarch yum-4.19.2-1.fc41.noarch Finish: chroot init Start: build phase for R-BiocIO-1.6.0-8.fc41.src.rpm Start: build setup for R-BiocIO-1.6.0-8.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Wrote: /builddir/build/SRPMS/R-BiocIO-1.6.0-8.fc41.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 6.8 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 65 kB/s | 3.8 kB 00:00 fedora 73 kB/s | 24 kB 00:00 updates 148 kB/s | 21 kB 00:00 Dependencies resolved. =============================================================================================================================================== Package Arch Version Repository Size =============================================================================================================================================== Installing: R-BiocGenerics noarch 0.42.0-7.fc41 copr_base 641 k R-S4Vectors-devel x86_64 0.34.0-7.fc41 copr_base 14 k R-core x86_64 4.4.0-1.fc41~bootstrap copr_base 63 M R-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k texlive-latex noarch 11:svn65161-84.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 30 M Installing dependencies: R-S4Vectors x86_64 0.34.0-7.fc41 copr_base 2.1 M R-core-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 88 k R-java x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k R-java-devel x86_64 4.4.0-1.fc41~bootstrap copr_base 11 k R-rpm-macros noarch 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Summary =============================================================================================================================================== Install 557 Packages Total download size: 452 M Installed size: 1.2 G Downloading Packages: (1/557): R-S4Vectors-devel-0.34.0-7.fc41.x86_64 76 kB/s | 14 kB 00:00 (2/557): R-BiocGenerics-0.42.0-7.fc41.noarch.rp 1.3 MB/s | 641 kB 00:00 (3/557): R-S4Vectors-0.34.0-7.fc41.x86_64.rpm 4.1 MB/s | 2.1 MB 00:00 (4/557): R-core-devel-4.4.0-1.fc41~bootstrap.x8 744 kB/s | 88 kB 00:00 (5/557): R-devel-4.4.0-1.fc41~bootstrap.x86_64. 103 kB/s | 11 kB 00:00 (6/557): R-java-4.4.0-1.fc41~bootstrap.x86_64.r 187 kB/s | 11 kB 00:00 (7/557): R-java-devel-4.4.0-1.fc41~bootstrap.x8 159 kB/s | 11 kB 00:00 (8/557): graphite2-1.3.14-15.fc40.x86_64.rpm 665 kB/s | 95 kB 00:00 (9/557): graphite2-devel-1.3.14-15.fc40.x86_64. 148 kB/s | 21 kB 00:00 (10/557): libRmath-4.4.0-1.fc41~bootstrap.x86_6 1.3 MB/s | 124 kB 00:00 (11/557): libRmath-devel-4.4.0-1.fc41~bootstrap 181 kB/s | 16 kB 00:00 (12/557): R-rpm-macros-1.2.1-9.fc40.noarch.rpm 157 kB/s | 11 kB 00:00 (13/557): abattis-cantarell-vf-fonts-0.301-12.f 1.5 MB/s | 120 kB 00:00 (14/557): annobin-docs-12.51-1.fc41.noarch.rpm 4.0 MB/s | 89 kB 00:00 (15/557): alsa-lib-1.2.11-2.fc40.x86_64.rpm 7.4 MB/s | 499 kB 00:00 (16/557): annobin-plugin-gcc-12.51-1.fc41.x86_6 21 MB/s | 961 kB 00:00 (17/557): avahi-libs-0.8-26.fc40.x86_64.rpm 2.6 MB/s | 67 kB 00:00 (18/557): biber-2.19-5.fc40.noarch.rpm 11 MB/s | 280 kB 00:00 (19/557): brotli-1.1.0-3.fc40.x86_64.rpm 958 kB/s | 20 kB 00:00 (20/557): brotli-devel-1.1.0-3.fc40.x86_64.rpm 1.6 MB/s | 34 kB 00:00 (21/557): bzip2-devel-1.0.8-18.fc40.x86_64.rpm 8.5 MB/s | 214 kB 00:00 (22/557): cairo-devel-1.18.0-3.fc40.x86_64.rpm 7.8 MB/s | 176 kB 00:00 (23/557): cairo-1.18.0-3.fc40.x86_64.rpm 18 MB/s | 709 kB 00:00 (24/557): cmake-filesystem-3.28.3-4.fc41.x86_64 867 kB/s | 18 kB 00:00 (25/557): copy-jdk-configs-4.1-5.fc40.noarch.rp 1.3 MB/s | 28 kB 00:00 (26/557): 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Running transaction Running scriptlet: texlive-base-11:20230311-84.fc41.x86_64 1/1 Running scriptlet: copy-jdk-configs-4.1-5.fc40.noarch 1/1 Running scriptlet: crypto-policies-scripts-20240320-1.git58e3d95.fc41.n 1/1 Running scriptlet: java-21-openjdk-headless-1:21.0.2.0.13-3.fc41.x86_64 1/1 Preparing : 1/1 Running scriptlet: texlive-base-11:20230311-84.fc41.x86_64 1/557 Installing : texlive-base-11:20230311-84.fc41.x86_64 1/557 Installing : zlib-ng-compat-devel-2.1.6-2.fc40.x86_64 2/557 Installing : libpng-2:1.6.40-3.fc40.x86_64 3/557 Installing : xorg-x11-proto-devel-2024.1-1.fc41.noarch 4/557 Installing : nspr-4.35.0-22.fc41.x86_64 5/557 Installing : libgfortran-14.0.1-0.15.fc41.x86_64 6/557 Installing : nss-util-3.99.0-1.fc41.x86_64 7/557 Installing : texlive-lib-11:20230311-84.fc41.x86_64 8/557 Installing : libquadmath-14.0.1-0.15.fc41.x86_64 9/557 Installing : libmpc-1.3.1-5.fc40.x86_64 10/557 Installing : tcl-1:8.6.14-1.fc41.x86_64 11/557 Installing : libicu-74.2-1.fc40.x86_64 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R-java-4.4.0-1.fc41~bootstrap.x86_64 R-java-devel-4.4.0-1.fc41~bootstrap.x86_64 R-rpm-macros-1.2.1-9.fc40.noarch abattis-cantarell-vf-fonts-0.301-12.fc40.noarch alsa-lib-1.2.11-2.fc40.x86_64 annobin-docs-12.51-1.fc41.noarch annobin-plugin-gcc-12.51-1.fc41.x86_64 avahi-libs-0.8-26.fc40.x86_64 biber-2.19-5.fc40.noarch brotli-1.1.0-3.fc40.x86_64 brotli-devel-1.1.0-3.fc40.x86_64 bzip2-devel-1.0.8-18.fc40.x86_64 cairo-1.18.0-3.fc40.x86_64 cairo-devel-1.18.0-3.fc40.x86_64 cmake-filesystem-3.28.3-4.fc41.x86_64 copy-jdk-configs-4.1-5.fc40.noarch cpp-14.0.1-0.15.fc41.x86_64 crypto-policies-scripts-20240320-1.git58e3d95.fc41.noarch cups-libs-1:2.4.7-13.fc41.x86_64 dbus-libs-1:1.14.10-3.fc40.x86_64 default-fonts-core-sans-4.0-12.fc40.noarch desktop-file-utils-0.26-12.fc40.x86_64 emacs-filesystem-1:30.0-2.fc41.noarch expat-2.6.2-1.fc41.x86_64 flexiblas-3.4.2-1.fc41.x86_64 flexiblas-devel-3.4.2-1.fc41.x86_64 flexiblas-netlib-3.4.2-1.fc41.x86_64 flexiblas-netlib64-3.4.2-1.fc41.x86_64 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perl-Business-ISSN-1.005-10.fc40.noarch perl-Carp-1.54-502.fc40.noarch perl-Class-Accessor-0.51-20.fc40.noarch perl-Class-Data-Inheritable-0.09-8.fc40.noarch perl-Class-Inspector-1.36-16.fc40.noarch perl-Class-Method-Modifiers-2.15-4.fc40.noarch perl-Class-Singleton-1.6-11.fc40.noarch perl-Class-Struct-0.68-507.fc41.noarch perl-Clone-0.46-6.fc40.x86_64 perl-Compress-Raw-Bzip2-2.211-1.fc41.x86_64 perl-Compress-Raw-Zlib-2.211-1.fc41.x86_64 perl-Convert-ASN1-0.34-3.fc40.noarch perl-Data-Compare-1.29-4.fc40.noarch perl-Data-Dump-1.25-10.fc40.noarch perl-Data-Dumper-2.188-503.fc40.x86_64 perl-Data-OptList-0.114-4.fc40.noarch perl-Data-Uniqid-0.12-33.fc40.noarch perl-Date-ISO8601-0.005-20.fc40.noarch perl-Date-Manip-6.95-1.fc41.noarch perl-DateTime-2:1.65-3.fc40.x86_64 perl-DateTime-Calendar-Julian-0.107-7.fc40.noarch perl-DateTime-Format-Builder-0.8300-13.fc40.noarch perl-DateTime-Format-Strptime-1:1.79-10.fc40.noarch perl-DateTime-Locale-1.42-1.fc41.noarch perl-DateTime-TimeZone-2.62-1.fc40.noarch perl-DateTime-TimeZone-SystemV-0.010-21.fc40.noarch perl-DateTime-TimeZone-Tzfile-0.011-21.fc40.noarch perl-Devel-CallChecker-0.009-5.fc40.x86_64 perl-Devel-Caller-2.07-5.fc40.x86_64 perl-Devel-GlobalDestruction-0.14-24.fc40.noarch perl-Devel-LexAlias-0.05-36.fc40.x86_64 perl-Devel-StackTrace-1:2.05-3.fc40.noarch perl-Digest-1.20-502.fc40.noarch perl-Digest-HMAC-1.04-10.fc40.noarch perl-Digest-MD5-2.59-3.fc40.x86_64 perl-Digest-SHA-1:6.04-503.fc40.x86_64 perl-Dist-CheckConflicts-0.11-30.fc40.noarch perl-DynaLoader-1.54-507.fc41.x86_64 perl-DynaLoader-Functions-0.004-4.fc40.noarch perl-Email-Date-Format-1.008-4.fc40.noarch perl-Encode-4:3.21-505.fc41.x86_64 perl-Encode-Locale-1.05-29.fc40.noarch perl-English-1.11-507.fc41.noarch perl-Errno-1.37-507.fc41.x86_64 perl-Eval-Closure-0.14-23.fc40.noarch perl-Exception-Class-1.45-10.fc40.noarch perl-Exporter-5.78-3.fc40.noarch perl-ExtUtils-MM-Utils-2:7.70-503.fc40.noarch perl-Fcntl-1.15-507.fc41.x86_64 perl-File-Basename-2.86-507.fc41.noarch perl-File-Compare-1.100.700-507.fc41.noarch perl-File-Copy-2.41-507.fc41.noarch perl-File-Find-1.43-507.fc41.noarch perl-File-Find-Rule-0.34-28.fc40.noarch perl-File-Listing-6.16-3.fc40.noarch perl-File-Path-2.18-503.fc40.noarch perl-File-ShareDir-1.118-11.fc40.noarch perl-File-Slurper-0.014-5.fc40.noarch perl-File-Temp-1:0.231.100-503.fc40.noarch perl-File-stat-1.13-507.fc41.noarch perl-FileHandle-2.05-507.fc41.noarch perl-Filter-2:1.64-503.fc40.x86_64 perl-GSSAPI-0.28-45.fc40.x86_64 perl-Getopt-Long-1:2.57-3.fc40.noarch perl-Getopt-Std-1.13-507.fc41.noarch perl-HTML-Parser-3.82-1.fc41.x86_64 perl-HTML-Tagset-3.24-1.fc41.noarch perl-HTTP-Cookies-6.11-3.fc40.noarch perl-HTTP-Date-6.06-4.fc40.noarch perl-HTTP-Message-6.45-3.fc40.noarch perl-HTTP-Negotiate-6.01-38.fc40.noarch perl-HTTP-Tiny-0.088-5.fc40.noarch perl-Hash-Util-FieldHash-1.26-507.fc41.x86_64 perl-I18N-LangTags-0.45-507.fc41.noarch perl-I18N-Langinfo-0.22-507.fc41.x86_64 perl-IO-1.52-507.fc41.x86_64 perl-IO-Compress-2.211-1.fc41.noarch perl-IO-HTML-1.004-12.fc40.noarch perl-IO-Socket-IP-0.42-2.fc40.noarch perl-IO-Socket-SSL-2.085-1.fc40.noarch perl-IO-String-1.08-50.fc40.noarch perl-IPC-Cmd-2:1.04-504.fc40.noarch perl-IPC-Open3-1.22-507.fc41.noarch perl-IPC-Run3-0.049-1.fc40.noarch perl-IPC-SysV-2.09-505.fc40.x86_64 perl-IPC-System-Simple-1.30-13.fc40.noarch perl-JSON-4.10-5.fc40.noarch perl-LDAP-1:0.68-13.fc40.noarch perl-LWP-MediaTypes-6.04-18.fc41.noarch perl-LWP-Protocol-https-6.14-1.fc41.noarch perl-Lingua-Translit-0.29-6.fc40.noarch perl-List-AllUtils-0.19-12.fc40.noarch perl-List-SomeUtils-0.59-5.fc40.noarch perl-List-UtilsBy-0.12-9.fc40.noarch perl-Locale-Maketext-1.33-503.fc40.noarch perl-Locale-Maketext-Simple-1:0.21-507.fc41.noarch perl-Log-Dispatch-2.71-4.fc40.noarch perl-Log-Dispatch-FileRotate-1.38-9.fc40.noarch perl-Log-Log4perl-1.57-5.fc40.noarch perl-MIME-Base64-3.16-503.fc40.x86_64 perl-MIME-Charset-1.013.1-5.fc40.noarch perl-MIME-Lite-3.033-10.fc40.noarch perl-MIME-Types-2.26-1.fc40.noarch perl-MRO-Compat-0.15-9.fc40.noarch perl-Mail-Sender-1:0.903-24.fc40.noarch perl-Mail-Sendmail-0.80-20.fc40.noarch perl-MailTools-2.21-16.fc40.noarch perl-Math-BigInt-1:2.0030.02-3.fc40.noarch perl-Math-Complex-1.62-507.fc41.noarch perl-Module-CoreList-1:5.20240320-1.fc41.noarch perl-Module-Implementation-0.09-39.fc40.noarch perl-Module-Load-1:0.36-503.fc40.noarch perl-Module-Load-Conditional-0.74-503.fc40.noarch perl-Module-Metadata-1.000038-5.fc40.noarch perl-Module-Runtime-0.016-22.fc40.noarch perl-Mozilla-CA-20240313-1.fc41.noarch perl-NTLM-1.09-38.fc40.noarch perl-Net-HTTP-6.23-4.fc40.noarch perl-Net-SMTP-SSL-1.04-24.fc40.noarch perl-Net-SSLeay-1.94-3.fc40.x86_64 perl-Number-Compare-0.03-38.fc40.noarch perl-Opcode-1.64-507.fc41.x86_64 perl-POSIX-2.13-507.fc41.x86_64 perl-Package-Generator-1.106-31.fc40.noarch perl-Package-Stash-0.40-7.fc40.noarch perl-Package-Stash-XS-0.30-7.fc40.x86_64 perl-PadWalker-2.5-13.fc40.x86_64 perl-Params-Check-1:0.38-502.fc40.noarch perl-Params-Classify-0.015-22.fc40.x86_64 perl-Params-Util-1.102-14.fc40.x86_64 perl-Params-Validate-1.31-7.fc40.x86_64 perl-Params-ValidationCompiler-0.31-5.fc40.noarch perl-Parse-RecDescent-1.967015-22.fc40.noarch perl-PathTools-3.89-502.fc40.x86_64 perl-Pod-Escapes-1:1.07-503.fc40.noarch perl-Pod-Html-1.34-507.fc41.noarch perl-Pod-Perldoc-3.28.01-503.fc40.noarch perl-Pod-Simple-1:3.45-6.fc40.noarch perl-Pod-Usage-4:2.03-503.fc40.noarch perl-Ref-Util-0.204-20.fc40.noarch perl-Ref-Util-XS-0.117-22.fc40.x86_64 perl-Regexp-Common-2017060201-24.fc40.noarch perl-Role-Tiny-2.002004-11.fc40.noarch perl-Safe-2.44-507.fc41.noarch perl-Scalar-List-Utils-5:1.63-503.fc40.x86_64 perl-SelectSaver-1.02-507.fc41.noarch perl-Socket-4:2.038-1.fc41.x86_64 perl-Sort-Key-1.33-30.fc40.x86_64 perl-Specio-0.48-6.fc40.noarch perl-Storable-1:3.32-502.fc40.x86_64 perl-Sub-Exporter-0.991-3.fc40.noarch perl-Sub-Exporter-Progressive-0.001013-24.fc40.noarch perl-Sub-Identify-0.14-26.fc40.x86_64 perl-Sub-Install-0.929-5.fc40.noarch perl-Symbol-1.09-507.fc41.noarch perl-Sys-Hostname-1.25-507.fc41.x86_64 perl-Sys-Syslog-0.36-504.fc40.x86_64 perl-Term-ANSIColor-5.01-504.fc40.noarch perl-Term-Cap-1.18-503.fc40.noarch perl-Text-Balanced-2.06-502.fc40.noarch perl-Text-BibTeX-0.89-5.fc40.x86_64 perl-Text-CSV-2.03-3.fc40.noarch perl-Text-Glob-0.11-23.fc40.noarch perl-Text-ParseWords-3.31-502.fc40.noarch perl-Text-Roman-3.5-27.fc40.noarch perl-Text-Soundex-3.05-30.fc40.x86_64 perl-Text-Tabs+Wrap-2024.001-1.fc41.noarch perl-Text-Unidecode-1.30-24.fc40.noarch perl-Tie-4.6-507.fc41.noarch perl-Tie-Cycle-1.228-1.fc40.noarch perl-Tie-RefHash-1.40-503.fc40.noarch perl-Time-HiRes-4:1.9775-502.fc40.x86_64 perl-Time-Local-2:1.350-5.fc40.noarch perl-TimeDate-1:2.33-14.fc40.noarch perl-Try-Tiny-0.31-9.fc40.noarch perl-URI-5.28-1.fc41.noarch perl-Unicode-Collate-1.31-502.fc40.x86_64 perl-Unicode-LineBreak-2019.001-20.fc40.x86_64 perl-Unicode-Normalize-1.32-502.fc40.x86_64 perl-Unicode-UCD-0.78-507.fc41.noarch perl-Variable-Magic-0.64-1.fc41.x86_64 perl-WWW-RobotRules-6.02-39.fc40.noarch perl-XML-LibXML-1:2.0210-1.fc40.x86_64 perl-XML-LibXML-Simple-1.01-14.fc40.noarch perl-XML-LibXSLT-2.002.001-5.fc40.x86_64 perl-XML-NamespaceSupport-1.12-23.fc40.noarch perl-XML-Parser-2.47-3.fc40.x86_64 perl-XML-SAX-1.02-16.fc40.noarch perl-XML-SAX-Base-1.09-23.fc40.noarch perl-XML-Writer-0.900-14.fc40.noarch perl-XML-XPath-1.48-6.fc40.noarch perl-XString-0.005-12.fc40.x86_64 perl-autodie-2.37-3.fc40.noarch perl-autovivification-0.18-22.fc40.x86_64 perl-base-2.27-507.fc41.noarch perl-constant-1.33-503.fc40.noarch perl-deprecate-0.04-507.fc41.noarch perl-encoding-4:3.00-505.fc41.x86_64 perl-if-0.61.000-507.fc41.noarch perl-interpreter-4:5.38.2-507.fc41.x86_64 perl-libnet-3.15-503.fc40.noarch perl-libs-4:5.38.2-507.fc41.x86_64 perl-libwww-perl-6.77-1.fc41.noarch perl-locale-1.10-507.fc41.noarch perl-meta-notation-5.38.2-507.fc41.noarch perl-mro-1.28-507.fc41.x86_64 perl-namespace-autoclean-0.29-18.fc40.noarch perl-namespace-clean-0.27-26.fc40.noarch perl-open-1.13-507.fc41.noarch perl-overload-1.37-507.fc41.noarch perl-overloading-0.02-507.fc41.noarch perl-parent-1:0.241-502.fc40.noarch perl-podlators-1:5.01-502.fc40.noarch perl-sigtrap-1.10-507.fc41.noarch perl-subs-1.04-507.fc41.noarch perl-vars-1.05-507.fc41.noarch perl-version-8:0.99.30-3.fc40.x86_64 perltidy-20240202-1.fc40.noarch pixman-0.43.4-1.fc41.x86_64 pixman-devel-0.43.4-1.fc41.x86_64 python-pip-wheel-24.0-2.fc41.noarch python3-3.12.3-2.fc41.x86_64 python3-libs-3.12.3-2.fc41.x86_64 python3-packaging-24.0-1.fc41.noarch sombok-2.4.0-21.fc40.x86_64 sysprof-capture-devel-46.0-1.fc41.x86_64 tcl-1:8.6.14-1.fc41.x86_64 tcl-devel-1:8.6.14-1.fc41.x86_64 texlive-algorithms-11:svn42428-71.fc40.noarch texlive-alphalph-11:svn53087-71.fc40.noarch texlive-amsfonts-11:svn61937-71.fc40.noarch texlive-amsmath-11:svn63514-71.fc40.noarch texlive-atbegshi-11:svn53051-71.fc40.noarch texlive-attachfile-11:svn42099-71.fc40.noarch texlive-atveryend-11:svn53108-71.fc40.noarch texlive-auto-pst-pdf-11:svn56596-71.fc40.noarch texlive-auxhook-11:svn53173-71.fc40.noarch texlive-avantgar-11:svn61983-71.fc40.noarch texlive-babel-11:svn65823-71.fc40.noarch texlive-babelbib-11:svn57349-71.fc40.noarch texlive-base-11:20230311-84.fc41.x86_64 texlive-bera-11:svn20031.0-71.fc40.noarch texlive-biblatex-11:svn66403-71.fc40.noarch texlive-bidi-11:svn65572-71.fc40.noarch texlive-bigintcalc-11:svn53172-71.fc40.noarch texlive-bitset-11:svn53837-71.fc40.noarch texlive-bookman-11:svn61719-71.fc40.noarch texlive-bookmark-11:svn56885-71.fc40.noarch texlive-booktabs-11:svn53402-71.fc40.noarch texlive-breakurl-11:svn29901.1.40-71.fc40.noarch texlive-caption-11:svn66580-71.fc40.noarch texlive-catchfile-11:svn53084-71.fc40.noarch texlive-changepage-11:svn15878.1.0c-71.fc40.noarch texlive-charter-11:svn15878.0-71.fc40.noarch texlive-cm-11:svn57963-71.fc40.noarch texlive-cm-super-11:svn15878.0-71.fc40.noarch texlive-colortbl-11:svn64015-71.fc40.noarch texlive-courier-11:svn61719-71.fc40.noarch texlive-csquotes-11:svn64389-71.fc40.noarch texlive-ctablestack-11:svn38514-71.fc40.noarch texlive-currfile-11:svn64673-71.fc40.noarch texlive-dehyph-11:svn48599-71.fc40.noarch texlive-enumitem-11:svn51423-71.fc40.noarch texlive-epstopdf-11:svn66461-84.fc41.noarch texlive-epstopdf-pkg-11:svn53546-71.fc40.noarch texlive-eso-pic-11:svn56658-71.fc40.noarch texlive-etex-11:svn66203-71.fc40.noarch texlive-etex-pkg-11:svn41784-71.fc40.noarch texlive-etexcmds-11:svn53171-71.fc40.noarch texlive-etoolbox-11:svn56554-71.fc40.noarch texlive-euenc-11:svn19795.0.1h-71.fc40.noarch texlive-fancyhdr-11:svn64977-71.fc40.noarch texlive-fancyvrb-11:svn65585-71.fc40.noarch texlive-filecontents-11:svn52142-71.fc40.noarch texlive-filehook-11:svn64822-71.fc40.noarch texlive-float-11:svn15878.1.3d-71.fc40.noarch texlive-fontspec-11:svn63386-71.fc40.noarch texlive-footmisc-11:svn62524-71.fc40.noarch texlive-fp-11:svn49719-71.fc40.noarch texlive-fpl-11:svn54512-71.fc40.noarch texlive-geometry-11:svn61719-71.fc40.noarch texlive-gettitlestring-11:svn53170-71.fc40.noarch texlive-graphics-11:svn66204-71.fc40.noarch texlive-graphics-cfg-11:svn41448-71.fc40.noarch texlive-graphics-def-11:svn64487-71.fc40.noarch texlive-gsftopk-11:svn52851-84.fc41.x86_64 texlive-helvetic-11:svn61719-71.fc40.noarch texlive-hobsub-11:svn52810-71.fc40.noarch texlive-hologo-11:svn61719-71.fc40.noarch texlive-hycolor-11:svn53584-71.fc40.noarch texlive-hypdoc-11:svn65678-71.fc40.noarch texlive-hyperref-11:svn65758-71.fc40.noarch texlive-hyph-utf8-11:svn61719-71.fc40.noarch texlive-hyphen-base-11:svn66413-71.fc40.noarch texlive-ifmtarg-11:svn47544-71.fc40.noarch texlive-ifplatform-11:svn45533-71.fc40.noarch texlive-iftex-11:svn61910-71.fc40.noarch texlive-infwarerr-11:svn53023-71.fc40.noarch texlive-intcalc-11:svn53168-71.fc40.noarch texlive-kastrup-11:svn15878.0-71.fc40.noarch texlive-knuth-lib-11:svn57963-71.fc40.noarch texlive-koma-script-11:svn64685-71.fc40.noarch texlive-kpathsea-11:svn66209-84.fc41.x86_64 texlive-kvdefinekeys-11:svn53193-71.fc40.noarch texlive-kvoptions-11:svn63622-71.fc40.noarch texlive-kvsetkeys-11:svn64632-71.fc40.noarch texlive-l3backend-11:svn65573-71.fc40.noarch texlive-l3kernel-11:svn66094-71.fc40.noarch texlive-l3packages-11:svn65722-71.fc40.noarch texlive-latex-11:svn65161-84.fc41.noarch texlive-latex-fonts-11:svn28888.0-71.fc40.noarch texlive-latexconfig-11:svn53525-71.fc40.noarch texlive-letltxmacro-11:svn53022-71.fc40.noarch texlive-lib-11:20230311-84.fc41.x86_64 texlive-listings-11:svn66222-71.fc40.noarch texlive-lm-11:svn65956-71.fc40.noarch texlive-logreq-11:svn53003-71.fc40.noarch texlive-ltxcmds-11:svn56421-71.fc40.noarch texlive-lua-alt-getopt-11:svn56414-71.fc40.noarch texlive-lua-uni-algos-11:svn62204-71.fc40.noarch texlive-luabidi-11:svn54512-71.fc40.noarch texlive-lualibs-11:svn64615-71.fc40.noarch texlive-luaotfload-11:svn64616-84.fc41.noarch texlive-luatex-11:svn66967-84.fc41.x86_64 texlive-luatexbase-11:svn52663-71.fc40.noarch texlive-makecmds-11:svn15878.0-71.fc40.noarch texlive-marginnote-11:svn48383-71.fc40.noarch texlive-marvosym-11:svn29349.2.2a-71.fc40.noarch texlive-mathpazo-11:svn52663-71.fc40.noarch texlive-memoir-11:svn65040-71.fc40.noarch texlive-mparhack-11:svn59066-71.fc40.noarch texlive-ms-11:svn57473-71.fc40.noarch texlive-multido-11:svn18302.1.42-71.fc40.noarch texlive-natbib-11:svn20668.8.31b-71.fc40.noarch texlive-palatino-11:svn61719-71.fc40.noarch texlive-paralist-11:svn43021-71.fc40.noarch texlive-pdfcolmk-11:svn52912-71.fc40.noarch texlive-pdfescape-11:svn53082-71.fc40.noarch texlive-pdftex-11:svn66243-84.fc41.x86_64 texlive-pdftexcmds-11:svn55777-71.fc40.noarch texlive-pgf-11:svn65553-71.fc40.noarch texlive-picture-11:svn54867-71.fc40.noarch texlive-placeins-11:svn19848.2.2-71.fc40.noarch texlive-plain-11:svn57963-71.fc40.noarch texlive-polyglossia-11:svn65792-71.fc40.noarch texlive-psnfss-11:svn54694-71.fc40.noarch texlive-pst-3d-11:svn17257.1.10-71.fc40.noarch texlive-pst-coil-11:svn62977-71.fc40.noarch texlive-pst-eps-11:svn15878.1.0-71.fc40.noarch texlive-pst-fill-11:svn60671-71.fc40.noarch texlive-pst-grad-11:svn15878.1.06-71.fc40.noarch texlive-pst-math-11:svn64732-71.fc40.noarch texlive-pst-node-11:svn61838-71.fc40.noarch texlive-pst-ovl-11:svn54963-71.fc40.noarch texlive-pst-plot-11:svn65346-71.fc40.noarch texlive-pst-text-11:svn49542-71.fc40.noarch texlive-pst-tools-11:svn60621-71.fc40.noarch texlive-pst-tree-11:svn60421-71.fc40.noarch texlive-pstricks-11:svn65346-71.fc40.noarch texlive-pstricks-add-11:svn65067-71.fc40.noarch texlive-ragged2e-11:svn66152-71.fc40.noarch texlive-refcount-11:svn53164-71.fc40.noarch texlive-rerunfilecheck-11:svn63869-71.fc40.noarch texlive-sauerj-11:svn15878.0-71.fc40.noarch texlive-setspace-11:svn65206-71.fc40.noarch texlive-showexpl-11:svn57414-71.fc40.noarch texlive-stringenc-11:svn52982-71.fc40.noarch texlive-subfig-11:svn15878.1.3-71.fc40.noarch texlive-symbol-11:svn61719-71.fc40.noarch texlive-tex-ini-files-11:svn40533-71.fc40.noarch texlive-texlive-scripts-11:svn66584-84.fc41.noarch texlive-texlive.infra-11:svn66512-84.fc41.noarch texlive-times-11:svn61719-71.fc40.noarch texlive-tipa-11:svn29349.1.3-71.fc40.noarch texlive-titlesec-11:svn59845-71.fc40.noarch texlive-tools-11:svn64892-71.fc40.noarch texlive-underscore-11:svn18261.0-71.fc40.noarch texlive-unicode-data-11:svn64423-71.fc40.noarch texlive-uniquecounter-11:svn53162-71.fc40.noarch texlive-url-11:svn32528.3.4-71.fc40.noarch texlive-utopia-11:svn15878.0-71.fc40.noarch texlive-varwidth-11:svn24104.0.92-71.fc40.noarch texlive-xcolor-11:svn63563-71.fc40.noarch texlive-xifthen-11:svn38929-71.fc40.noarch texlive-xkeyval-11:svn63616-71.fc40.noarch texlive-xpatch-11:svn54563-71.fc40.noarch texlive-xstring-11:svn65551-71.fc40.noarch texlive-xunicode-11:svn30466.0.981-71.fc40.noarch texlive-zapfding-11:svn61719-71.fc40.noarch texlive-zref-11:svn62977-71.fc40.noarch tk-1:8.6.14-1.fc41.x86_64 tk-devel-1:8.6.14-1.fc41.x86_64 tre-0.8.0-43.20140228gitc2f5d13.fc40.x86_64 tre-common-0.8.0-43.20140228gitc2f5d13.fc40.noarch tre-devel-0.8.0-43.20140228gitc2f5d13.fc40.x86_64 ttmkfdir-3.0.9-70.fc40.x86_64 tzdata-2024a-5.fc41.noarch tzdata-java-2024a-5.fc41.noarch xdg-utils-1.2.1-1.fc41.noarch xml-common-0.6.3-63.fc40.noarch xorg-x11-fonts-Type1-7.5-38.fc40.noarch xorg-x11-proto-devel-2024.1-1.fc41.noarch xpdf-libs-1:4.05-3.fc41.x86_64 xz-devel-1:5.4.6-3.fc41.x86_64 zlib-ng-compat-devel-2.1.6-2.fc40.x86_64 zziplib-0.13.72-6.fc40.x86_64 Complete! Finish: build setup for R-BiocIO-1.6.0-8.fc41.src.rpm Start: rpmbuild R-BiocIO-1.6.0-8.fc41.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1714003200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.WLJojZ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf BiocIO + /usr/bin/mkdir -p BiocIO + cd BiocIO + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/BiocIO_1.6.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + rm -rf /builddir/build/BUILD/BiocIO-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/BiocIO-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.yFdhwD + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocIO + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.d1NsFo + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 ++ dirname /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocIO + mkdir -p /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64/usr/share/R/library + R CMD INSTALL BiocIO -l /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64/usr/share/R/library * installing *source* package ‘BiocIO’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘BiocIO’ finding HTML links ... done BiocFile-class html export html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocIO) + test -d BiocIO/src + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64/usr/share/R/library/R.css + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.6.0-8.fc41 --unique-debug-suffix -1.6.0-8.fc41.x86_64 --unique-debug-src-base R-BiocIO-1.6.0-8.fc41.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/BiocIO find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.bAPrbm + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd BiocIO + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-BiocIO-1.6.0-8.fc41.noarch Provides: R(BiocIO) = 1.6.0 R-BiocIO = 1.6.0-8.fc41 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.4 R(BiocGenerics) R(S4Vectors) R(methods) R(tools) R-core >= 4.0 Suggests: R(BiocStyle) R(knitr) R(rmarkdown) R(testthat) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 Wrote: /builddir/build/RPMS/R-BiocIO-1.6.0-8.fc41.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.JyHzOj + umask 022 + cd /builddir/build/BUILD + cd BiocIO + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-BiocIO-1.6.0-8.fc41.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.vgbsVl + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/BiocIO-SPECPARTS + rm -rf BiocIO BiocIO.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-BiocIO-1.6.0-8.fc41.src.rpm Finish: build phase for R-BiocIO-1.6.0-8.fc41.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.log /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-x86_64-1714051623.995958/root/var/log/dnf.rpm.log INFO: Done(/var/lib/copr-rpmbuild/results/R-BiocIO-1.6.0-8.fc41.src.rpm) Config(child) 1 minutes 7 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-BiocIO", "epoch": null, "version": "1.6.0", "release": "8.fc41", "arch": "src" }, { "name": "R-BiocIO", "epoch": null, "version": "1.6.0", "release": "8.fc41", "arch": "noarch" } ] } RPMResults finished