Warning: Permanently added '54.84.46.18' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8709145-fedora-41-aarch64 --chroot fedora-41-aarch64 Version: 1.2 PID: 8925 Logging PID: 8926 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8709145, 'buildroot_pkgs': [], 'chroot': 'fedora-41-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'df0b9f1495ea84a05fa7bc46fe8cf4dadd373eab', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-Rhtslib', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'R-Rhtslib', 'package_version': '2.4.1-4', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-41-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/iucar', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': None, 'submitter': 'https://src.fedoraproject.org/user/iucar', 'tags': [], 'task_id': '8709145-fedora-41-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-Rhtslib /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/R-Rhtslib', '/var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib'... Running: git checkout df0b9f1495ea84a05fa7bc46fe8cf4dadd373eab -- cmd: ['git', 'checkout', 'df0b9f1495ea84a05fa7bc46fe8cf4dadd373eab', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib rc: 0 stdout: stderr: Note: switching to 'df0b9f1495ea84a05fa7bc46fe8cf4dadd373eab'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at df0b9f1 automatic import of R-Rhtslib Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading Rhtslib_2.4.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o Rhtslib_2.4.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-Rhtslib/Rhtslib_2.4.1.tar.gz/md5/b7d295a694e865f4f4060c94c4bca446/Rhtslib_2.4.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 4474k 100 4474k 0 0 199M 0 --:--:-- --:--:-- --:--:-- 208M INFO: Reading stdout from command: md5sum Rhtslib_2.4.1.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib/R-Rhtslib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1740738339.692994 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.0 starting (python version = 3.13.0, NVR = mock-6.0-1.fc41), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib/R-Rhtslib.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1740738339.692994 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib/R-Rhtslib.spec) Config(fedora-41-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 6.0 INFO: Mock Version: 6.0 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1740738339.692994/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Tagging container image as mock-bootstrap-990f9baa-0105-4c09-8e8d-2cb9fe32d456 INFO: Checking that e6671b1ad9b07cf88d0166a5d58ce1944cac079e1cf21a4210e40c6b8b6b803e image matches host's architecture INFO: Copy content of container e6671b1ad9b07cf88d0166a5d58ce1944cac079e1cf21a4210e40c6b8b6b803e to /var/lib/mock/fedora-41-aarch64-bootstrap-1740738339.692994/root INFO: mounting e6671b1ad9b07cf88d0166a5d58ce1944cac079e1cf21a4210e40c6b8b6b803e with podman image mount INFO: image e6671b1ad9b07cf88d0166a5d58ce1944cac079e1cf21a4210e40c6b8b6b803e as /var/lib/containers/storage/overlay/7e02f5625f63ecd31f684d1860331afac52d75a04ab6dd4ee1215edd2009fb24/merged INFO: umounting image e6671b1ad9b07cf88d0166a5d58ce1944cac079e1cf21a4210e40c6b8b6b803e (/var/lib/containers/storage/overlay/7e02f5625f63ecd31f684d1860331afac52d75a04ab6dd4ee1215edd2009fb24/merged) with podman image umount INFO: Removing image mock-bootstrap-990f9baa-0105-4c09-8e8d-2cb9fe32d456 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-1740738339.692994/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.aarch64 rpm-sequoia-1.7.0-5.fc41.aarch64 dnf5-5.2.10.0-2.fc41.aarch64 dnf5-plugins-5.2.10.0-2.fc41.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 22.7 MiB/s | 10.8 MiB | 00m00s fedora 100% | 44.7 MiB/s | 34.2 MiB | 00m01s Copr repository 100% | 71.4 MiB/s | 3.1 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 134.5 MiB/s | 16.3 MiB | 00m00s Repositories loaded. 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 463.3 KiB package-notes-srpm-macros noarch 0.5-13.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 KiB pam-libs aarch64 1.7.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 222.9 KiB pcre2 aarch64 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 713.6 KiB pcre2-syntax noarch 10.45-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 273.9 KiB perl-srpm-macros noarch 1-57.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 861.0 B pkgconf aarch64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 112.4 KiB pkgconf-m4 noarch 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 990.0 B popt aarch64 1.19-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144.8 KiB publicsuffix-list-dafsa noarch 20250116-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 68.5 KiB pyproject-srpm-macros noarch 1.17.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.8.2-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 464.0 B readline aarch64 8.2-12.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 561.1 KiB rpm aarch64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.3 MiB rpm-build-libs aarch64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 198.6 KiB rpm-libs aarch64 4.20.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 733.5 KiB rpm-sequoia aarch64 1.7.0-5.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB rust-srpm-macros noarch 26.3-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-12.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.8 KiB sqlite-libs aarch64 3.49.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB systemd-libs aarch64 257.3-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.3 MiB systemd-standalone-sysusers aarch64 257.3-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 329.4 KiB tree-sitter-srpm-macros noarch 0.1.0-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.5 KiB util-linux-core aarch64 2.40.4-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.4 MiB xxhash-libs aarch64 0.8.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 85.9 KiB xz-libs aarch64 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 202.3 KiB zig-srpm-macros noarch 1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip aarch64 3.0-43.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 762.5 KiB zlib-ng-compat aarch64 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 133.4 KiB zstd aarch64 1.5.7-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.5 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 148 packages Total size of inbound packages is 51 MiB. Need to download 51 MiB. After this operation, 202 MiB extra will be used (install 202 MiB, remove 0 B). [ 1/148] bzip2-0:1.0.8-20.fc42.aarch64 100% | 1.9 MiB/s | 52.0 KiB | 00m00s [ 2/148] cpio-0:2.15-2.fc41.aarch64 100% | 34.8 MiB/s | 284.8 KiB | 00m00s [ 3/148] bash-0:5.2.37-3.fc43.aarch64 100% | 45.3 MiB/s | 1.8 MiB | 00m00s [ 4/148] fedora-release-common-0:43-0. 100% | 6.3 MiB/s | 25.8 KiB | 00m00s [ 5/148] diffutils-0:3.10-9.fc42.aarch 100% | 47.9 MiB/s | 392.8 KiB | 00m00s [ 6/148] findutils-1:4.10.0-5.fc42.aar 100% | 59.2 MiB/s | 545.6 KiB | 00m00s [ 7/148] gawk-0:5.3.1-1.fc42.aarch64 100% | 87.0 MiB/s | 1.0 MiB | 00m00s [ 8/148] glibc-minimal-langpack-0:2.41 100% | 15.5 MiB/s | 126.9 KiB | 00m00s [ 9/148] grep-0:3.11-10.fc42.aarch64 100% | 40.0 MiB/s | 286.5 KiB | 00m00s [ 10/148] coreutils-0:9.6-2.fc43.aarch6 100% | 15.8 MiB/s | 1.1 MiB | 00m00s [ 11/148] gzip-0:1.13-3.fc42.aarch64 100% | 22.6 MiB/s | 162.0 KiB | 00m00s [ 12/148] patch-0:2.7.6-26.fc42.aarch64 100% | 24.6 MiB/s | 125.7 KiB | 00m00s [ 13/148] info-0:7.2-3.fc42.aarch64 100% | 21.9 MiB/s | 179.5 KiB | 00m00s [ 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27/148] filesystem-srpm-macros-0:3.18 100% | 4.2 MiB/s | 25.5 KiB | 00m00s [ 28/148] rpm-0:4.20.1-1.fc43.aarch64 100% | 63.2 MiB/s | 517.8 KiB | 00m00s [ 29/148] libblkid-0:2.40.4-7.fc43.aarc 100% | 16.8 MiB/s | 120.4 KiB | 00m00s [ 30/148] libfdisk-0:2.40.4-7.fc43.aarc 100% | 18.5 MiB/s | 151.3 KiB | 00m00s [ 31/148] libmount-0:2.40.4-7.fc43.aarc 100% | 20.9 MiB/s | 149.8 KiB | 00m00s [ 32/148] glibc-0:2.41.9000-1.fc43.aarc 100% | 57.0 MiB/s | 1.9 MiB | 00m00s [ 33/148] libsmartcols-0:2.40.4-7.fc43. 100% | 8.6 MiB/s | 79.4 KiB | 00m00s [ 34/148] libuuid-0:2.40.4-7.fc43.aarch 100% | 2.2 MiB/s | 25.3 KiB | 00m00s [ 35/148] xz-libs-1:5.6.3-3.fc42.aarch6 100% | 15.5 MiB/s | 111.0 KiB | 00m00s [ 36/148] util-linux-core-0:2.40.4-7.fc 100% | 44.8 MiB/s | 504.2 KiB | 00m00s [ 37/148] fedora-gpg-keys-0:43-0.1.noar 100% | 13.6 MiB/s | 125.2 KiB | 00m00s [ 38/148] fedora-repos-rawhide-0:43-0.1 100% | 1.2 MiB/s | 8.8 KiB | 00m00s [ 39/148] rpm-libs-0:4.20.1-1.fc43.aarc 100% | 37.3 MiB/s | 305.5 KiB | 00m00s [ 40/148] rpm-build-libs-0:4.20.1-1.fc4 100% | 15.3 MiB/s | 94.3 KiB | 00m00s [ 41/148] glibc-gconv-extra-0:2.41.9000 100% | 89.6 MiB/s | 1.7 MiB | 00m00s [ 42/148] libxcrypt-0:4.4.38-6.fc43.aar 100% | 15.2 MiB/s | 124.3 KiB | 00m00s [ 43/148] systemd-libs-0:257.3-7.fc43.a 100% | 76.1 MiB/s | 779.7 KiB | 00m00s [ 44/148] libselinux-0:3.8-1.fc42.aarch 100% | 23.4 MiB/s | 95.9 KiB | 00m00s [ 45/148] libsepol-0:3.8-1.fc42.aarch64 100% | 45.2 MiB/s | 323.9 KiB | 00m00s [ 46/148] ncurses-base-0:6.5-5.20250125 100% | 15.5 MiB/s | 63.5 KiB | 00m00s [ 47/148] ncurses-libs-0:6.5-5.20250125 100% | 45.2 MiB/s | 324.2 KiB | 00m00s [ 48/148] audit-libs-0:4.0.3-2.fc42.aar 100% | 24.6 MiB/s | 126.0 KiB | 00m00s [ 49/148] pam-libs-0:1.7.0-4.fc42.aarch 100% | 14.2 MiB/s | 58.0 KiB | 00m00s [ 50/148] libeconf-0:0.7.6-1.fc43.aarch 100% | 6.9 MiB/s | 35.3 KiB | 00m00s [ 51/148] zlib-ng-compat-0:2.2.4-2.fc43 100% | 16.1 MiB/s | 65.8 KiB | 00m00s [ 52/148] libcap-ng-0:0.8.5-4.fc42.aarc 100% | 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elfutils-libelf-0:0.192-9.fc4 100% | 20.2 MiB/s | 207.1 KiB | 00m00s [ 66/148] elfutils-libs-0:0.192-9.fc41. 100% | 25.6 MiB/s | 262.6 KiB | 00m00s [ 67/148] elfutils-0:0.192-9.fc41.aarch 100% | 88.6 MiB/s | 544.2 KiB | 00m00s [ 68/148] elfutils-debuginfod-client-0: 100% | 22.5 MiB/s | 46.2 KiB | 00m00s [ 69/148] file-0:5.46-1.fc42.aarch64 100% | 9.6 MiB/s | 48.9 KiB | 00m00s [ 70/148] libgomp-0:15.0.1-0.8.fc43.aar 100% | 47.3 MiB/s | 339.3 KiB | 00m00s [ 71/148] file-libs-0:5.46-1.fc42.aarch 100% | 63.7 MiB/s | 847.6 KiB | 00m00s [ 72/148] alternatives-0:1.31-3.fc42.aa 100% | 6.5 MiB/s | 40.2 KiB | 00m00s [ 73/148] jansson-0:2.14-2.fc42.aarch64 100% | 6.5 MiB/s | 46.8 KiB | 00m00s [ 74/148] debugedit-0:5.1-5.fc43.aarch6 100% | 9.5 MiB/s | 78.2 KiB | 00m00s [ 75/148] libarchive-0:3.7.7-3.fc43.aar 100% | 44.0 MiB/s | 405.6 KiB | 00m00s [ 76/148] zstd-0:1.5.7-1.fc43.aarch64 100% | 48.3 MiB/s | 445.5 KiB | 00m00s [ 77/148] pkgconf-0:2.3.0-2.fc42.aarch6 100% | 7.3 MiB/s | 44.7 KiB | 00m00s [ 78/148] binutils-0:2.44-3.fc43.aarch6 100% | 153.6 MiB/s | 6.1 MiB | 00m00s [ 79/148] pkgconf-pkg-config-0:2.3.0-2. 100% | 706.9 KiB/s | 9.9 KiB | 00m00s [ 80/148] pkgconf-m4-0:2.3.0-2.fc42.noa 100% | 1.5 MiB/s | 14.2 KiB | 00m00s [ 81/148] libpkgconf-0:2.3.0-2.fc42.aar 100% | 6.2 MiB/s | 38.2 KiB | 00m00s [ 82/148] curl-0:8.12.1-1.fc43.aarch64 100% | 35.9 MiB/s | 220.7 KiB | 00m00s [ 83/148] build-reproducibility-srpm-ma 100% | 2.9 MiB/s | 11.7 KiB | 00m00s [ 84/148] forge-srpm-macros-0:0.4.0-2.f 100% | 4.8 MiB/s | 19.9 KiB | 00m00s [ 85/148] efi-srpm-macros-0:6-2.fc42.no 100% | 4.4 MiB/s | 22.5 KiB | 00m00s [ 86/148] add-determinism-0:0.6.0-1.fc4 100% | 92.5 MiB/s | 852.0 KiB | 00m00s [ 87/148] go-srpm-macros-0:3.6.0-6.fc42 100% | 6.8 MiB/s | 27.7 KiB | 00m00s [ 88/148] pyproject-srpm-macros-0:1.17. 100% | 3.4 MiB/s | 14.0 KiB | 00m00s [ 89/148] qt6-srpm-macros-0:6.8.2-2.fc4 100% | 2.3 MiB/s | 9.3 KiB | 00m00s [ 90/148] tree-sitter-srpm-macros-0:0.1 100% | 2.7 MiB/s | 11.2 KiB | 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[104/148] qt5-srpm-macros-0:5.15.15-1.f 100% | 2.9 MiB/s | 8.9 KiB | 00m00s [105/148] rust-srpm-macros-0:26.3-4.fc4 100% | 3.8 MiB/s | 11.7 KiB | 00m00s [106/148] zig-srpm-macros-0:1-4.fc42.no 100% | 2.7 MiB/s | 8.2 KiB | 00m00s [107/148] zip-0:3.0-43.fc42.aarch64 100% | 42.5 MiB/s | 261.1 KiB | 00m00s [108/148] ed-0:1.21-2.fc42.aarch64 100% | 16.0 MiB/s | 81.9 KiB | 00m00s [109/148] libattr-0:2.5.2-5.fc42.aarch6 100% | 3.2 MiB/s | 16.4 KiB | 00m00s [110/148] pcre2-syntax-0:10.45-1.fc43.n 100% | 31.6 MiB/s | 161.7 KiB | 00m00s [111/148] pcre2-0:10.45-1.fc43.aarch64 100% | 33.9 MiB/s | 242.7 KiB | 00m00s [112/148] libxml2-0:2.12.9-2.fc42.aarch 100% | 73.6 MiB/s | 678.7 KiB | 00m00s [113/148] lz4-libs-0:1.10.0-2.fc42.aarc 100% | 19.4 MiB/s | 79.6 KiB | 00m00s [114/148] mpfr-0:4.2.1-6.fc42.aarch64 100% | 39.3 MiB/s | 321.9 KiB | 00m00s [115/148] gmp-1:6.3.0-3.fc43.aarch64 100% | 26.6 MiB/s | 272.4 KiB | 00m00s [116/148] openssl-libs-1:3.2.4-2.fc43.a 100% | 128.1 MiB/s | 2.2 MiB | 00m00s [117/148] elfutils-default-yama-scope-0 100% | 6.0 MiB/s | 12.4 KiB | 00m00s [118/148] crypto-policies-0:20250214-1. 100% | 14.5 MiB/s | 74.0 KiB | 00m00s [119/148] json-c-0:0.18-2.fc42.aarch64 100% | 7.3 MiB/s | 44.9 KiB | 00m00s [120/148] libstdc++-0:15.0.1-0.8.fc43.a 100% | 73.3 MiB/s | 825.7 KiB | 00m00s [121/148] libffi-0:3.4.6-5.fc42.aarch64 100% | 9.4 MiB/s | 38.3 KiB | 00m00s [122/148] ca-certificates-0:2024.2.69_v 100% | 102.5 MiB/s | 945.0 KiB | 00m00s [123/148] p11-kit-0:0.25.5-5.fc42.aarch 100% | 56.0 MiB/s | 458.5 KiB | 00m00s [124/148] p11-kit-trust-0:0.25.5-5.fc42 100% | 21.3 MiB/s | 131.1 KiB | 00m00s [125/148] libtasn1-0:4.20.0-1.fc43.aarc 100% | 18.0 MiB/s | 73.7 KiB | 00m00s [126/148] fedora-release-0:43-0.5.noarc 100% | 3.6 MiB/s | 14.9 KiB | 00m00s [127/148] systemd-standalone-sysusers-0 100% | 24.6 MiB/s | 150.9 KiB | 00m00s [128/148] fedora-release-identity-basic 100% | 3.8 MiB/s | 15.7 KiB | 00m00s [129/148] libnghttp2-0:1.64.0-3.fc42.aa 100% | 18.8 MiB/s | 76.9 KiB | 00m00s [130/148] libcurl-0:8.12.1-1.fc43.aarch 100% | 51.4 MiB/s | 368.8 KiB | 00m00s [131/148] libssh-config-0:0.11.1-4.fc42 100% | 2.2 MiB/s | 9.0 KiB | 00m00s [132/148] libssh-0:0.11.1-4.fc42.aarch6 100% | 37.5 MiB/s | 230.3 KiB | 00m00s [133/148] xxhash-libs-0:0.8.3-2.fc42.aa 100% | 6.8 MiB/s | 34.8 KiB | 00m00s [134/148] gdb-minimal-0:16.2-2.fc43.aar 100% | 160.6 MiB/s | 4.2 MiB | 00m00s [135/148] krb5-libs-0:1.21.3-5.fc42.aar 100% | 61.1 MiB/s | 750.6 KiB | 00m00s [136/148] openldap-0:2.6.9-3.fc42.aarch 100% | 16.4 MiB/s | 251.6 KiB | 00m00s [137/148] libbrotli-0:1.1.0-6.fc42.aarc 100% | 33.3 MiB/s | 340.5 KiB | 00m00s [138/148] libidn2-0:2.3.7-3.fc42.aarch6 100% | 15.8 MiB/s | 113.0 KiB | 00m00s [139/148] keyutils-libs-0:1.6.3-5.fc42. 100% | 5.2 MiB/s | 31.8 KiB | 00m00s [140/148] libpsl-0:0.21.5-5.fc42.aarch6 100% | 10.5 MiB/s | 64.2 KiB | 00m00s [141/148] libcom_err-0:1.47.2-3.fc42.aa 100% | 3.7 MiB/s | 26.8 KiB | 00m00s [142/148] libverto-0:0.3.2-10.fc42.aarc 100% | 2.5 MiB/s | 20.8 KiB | 00m00s [143/148] libevent-0:2.1.12-15.fc42.aar 100% | 31.1 MiB/s | 254.7 KiB | 00m00s [144/148] cyrus-sasl-lib-0:2.1.28-30.fc 100% | 68.9 MiB/s | 776.2 KiB | 00m00s [145/148] libtool-ltdl-0:2.5.4-4.fc42.a 100% | 6.9 MiB/s | 35.4 KiB | 00m00s [146/148] publicsuffix-list-dafsa-0:202 100% | 9.6 MiB/s | 58.8 KiB | 00m00s [147/148] libunistring-0:1.1-9.fc42.aar 100% | 75.2 MiB/s | 539.4 KiB | 00m00s [148/148] gdbm-libs-1:1.23-9.fc42.aarch 100% | 9.1 MiB/s | 56.2 KiB | 00m00s -------------------------------------------------------------------------------- [148/148] Total 100% | 86.0 MiB/s | 50.6 MiB | 00m01s Running transaction Importing OpenPGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/150] Verify package files 100% | 714.0 B/s | 148.0 B | 00m00s >>> Running pre-transaction scriptlet: filesystem-0:3.18-38.fc43.aarch64 >>> Finished pre-transaction scriptlet: filesystem-0:3.18-38.fc43.aarch64 >>> [RPM] /var/lib/mock/fedora-41-aarch64-1740738339.692994/root/var/cache/dnf/c [ 2/150] Prepare transaction 100% | 2.5 KiB/s | 148.0 B | 00m00s [ 3/150] Installing libgcc-0:15.0.1-0. 100% | 218.6 MiB/s | 223.9 KiB | 00m00s [ 4/150] Installing publicsuffix-list- 100% | 0.0 B/s | 69.2 KiB | 00m00s [ 5/150] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/150] Installing fedora-release-ide 100% | 0.0 B/s | 976.0 B | 00m00s [ 7/150] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 8/150] Installing fedora-gpg-keys-0: 100% | 28.4 MiB/s | 174.8 KiB | 00m00s [ 9/150] Installing fedora-repos-0:43- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/150] Installing fedora-release-com 100% | 23.8 MiB/s | 24.4 KiB | 00m00s [ 11/150] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/150] Installing setup-0:2.15.0-12. 100% | 44.3 MiB/s | 726.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 13/150] Installing filesystem-0:3.18- 100% | 2.0 MiB/s | 212.4 KiB | 00m00s [ 14/150] Installing pcre2-syntax-0:10. 100% | 269.9 MiB/s | 276.4 KiB | 00m00s [ 15/150] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [ 16/150] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [ 17/150] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [ 18/150] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [ 19/150] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [ 20/150] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [ 21/150] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [ 22/150] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [ 23/150] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 24/150] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [ 25/150] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [ 26/150] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 740.0 B | 00m00s [ 27/150] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [ 28/150] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 352.2 KiB | 00m00s [ 29/150] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 30/150] Installing ncurses-libs-0:6.5 100% | 207.9 MiB/s | 1.2 MiB | 00m00s [ 31/150] Installing glibc-0:2.41.9000- 100% | 156.6 MiB/s | 6.3 MiB | 00m00s [ 32/150] Installing bash-0:5.2.37-3.fc 100% | 204.7 MiB/s | 8.2 MiB | 00m00s [ 33/150] Installing glibc-common-0:2.4 100% | 60.2 MiB/s | 1.3 MiB | 00m00s [ 34/150] Installing glibc-gconv-extra- 100% | 352.1 MiB/s | 18.7 MiB | 00m00s [ 35/150] Installing zlib-ng-compat-0:2 100% | 131.1 MiB/s | 134.2 KiB | 00m00s [ 36/150] Installing xz-libs-1:5.6.3-3. 100% | 198.6 MiB/s | 203.4 KiB | 00m00s [ 37/150] Installing bzip2-libs-0:1.0.8 100% | 72.0 MiB/s | 73.7 KiB | 00m00s [ 38/150] Installing libuuid-0:2.40.4-7 100% | 68.9 MiB/s | 70.5 KiB | 00m00s [ 39/150] Installing libblkid-0:2.40.4- 100% | 284.7 MiB/s | 291.5 KiB | 00m00s [ 40/150] Installing libxcrypt-0:4.4.38 100% | 134.4 MiB/s | 275.2 KiB | 00m00s [ 41/150] Installing readline-0:8.2-12. 100% | 275.0 MiB/s | 563.2 KiB | 00m00s [ 42/150] Installing libzstd-0:1.5.7-1. 100% | 217.8 MiB/s | 669.0 KiB | 00m00s [ 43/150] Installing elfutils-libelf-0: 100% | 297.4 MiB/s | 1.2 MiB | 00m00s [ 44/150] Installing popt-0:1.19-8.fc42 100% | 49.3 MiB/s | 151.4 KiB | 00m00s [ 45/150] Installing gmp-1:6.3.0-3.fc43 100% | 214.9 MiB/s | 660.1 KiB | 00m00s [ 46/150] Installing libstdc++-0:15.0.1 100% | 307.2 MiB/s | 2.8 MiB | 00m00s [ 47/150] Installing libattr-0:2.5.2-5. 100% | 66.5 MiB/s | 68.0 KiB | 00m00s [ 48/150] Installing libacl-0:2.3.2-3.f 100% | 0.0 B/s | 67.1 KiB | 00m00s [ 49/150] Installing mpfr-0:4.2.1-6.fc4 100% | 246.2 MiB/s | 756.3 KiB | 00m00s [ 50/150] Installing gawk-0:5.3.1-1.fc4 100% | 102.2 MiB/s | 2.5 MiB | 00m00s [ 51/150] Installing dwz-0:0.15-9.fc42. 100% | 18.6 MiB/s | 323.9 KiB | 00m00s [ 52/150] Installing unzip-0:6.0-66.fc4 100% | 27.2 MiB/s | 473.7 KiB | 00m00s [ 53/150] Installing file-libs-0:5.46-1 100% | 594.0 MiB/s | 11.9 MiB | 00m00s [ 54/150] Installing file-0:5.46-1.fc42 100% | 5.5 MiB/s | 141.7 KiB | 00m00s [ 55/150] Installing crypto-policies-0: 100% | 20.0 MiB/s | 163.5 KiB | 00m00s [ 56/150] Installing libsmartcols-0:2.4 100% | 220.2 MiB/s | 225.4 KiB | 00m00s [ 57/150] Installing libsepol-0:3.8-1.f 100% | 264.0 MiB/s | 810.9 KiB | 00m00s [ 58/150] Installing libeconf-0:0.7.6-1 100% | 80.4 MiB/s | 82.3 KiB | 00m00s [ 59/150] Installing libcap-ng-0:0.8.5- 100% | 159.0 MiB/s | 162.8 KiB | 00m00s [ 60/150] Installing audit-libs-0:4.0.3 100% | 203.7 MiB/s | 417.2 KiB | 00m00s [ 61/150] Installing pam-libs-0:1.7.0-4 100% | 220.0 MiB/s | 225.3 KiB | 00m00s [ 62/150] Installing libcap-0:2.73-2.fc 100% | 26.3 MiB/s | 511.6 KiB | 00m00s [ 63/150] Installing systemd-libs-0:257 100% | 259.5 MiB/s | 2.3 MiB | 00m00s [ 64/150] Installing lua-libs-0:5.4.7-2 100% | 161.2 MiB/s | 330.1 KiB | 00m00s [ 65/150] Installing alternatives-0:1.3 100% | 5.6 MiB/s | 91.7 KiB | 00m00s [ 66/150] Installing pcre2-0:10.45-1.fc 100% | 232.7 MiB/s | 715.0 KiB | 00m00s [ 67/150] Installing libselinux-0:3.8-1 100% | 197.6 MiB/s | 202.3 KiB | 00m00s [ 68/150] Installing grep-0:3.11-10.fc4 100% | 49.2 MiB/s | 1.0 MiB | 00m00s [ 69/150] Installing findutils-1:4.10.0 100% | 83.5 MiB/s | 1.9 MiB | 00m00s [ 70/150] Installing sed-0:4.9-4.fc42.a 100% | 41.0 MiB/s | 881.4 KiB | 00m00s [ 71/150] Installing xz-1:5.6.3-3.fc42. 100% | 60.1 MiB/s | 1.3 MiB | 00m00s [ 72/150] Installing libmount-0:2.40.4- 100% | 174.3 MiB/s | 356.9 KiB | 00m00s [ 73/150] Installing lz4-libs-0:1.10.0- 100% | 193.9 MiB/s | 198.5 KiB | 00m00s [ 74/150] Installing libffi-0:3.4.6-5.f 100% | 152.1 MiB/s | 155.8 KiB | 00m00s [ 75/150] Installing libtasn1-0:4.20.0- 100% | 217.0 MiB/s | 222.2 KiB | 00m00s [ 76/150] Installing p11-kit-0:0.25.5-5 100% | 92.1 MiB/s | 2.4 MiB | 00m00s [ 77/150] Installing libunistring-0:1.1 100% | 291.0 MiB/s | 1.7 MiB | 00m00s [ 78/150] Installing libidn2-0:2.3.7-3. 100% | 109.1 MiB/s | 335.0 KiB | 00m00s [ 79/150] Installing libpsl-0:0.21.5-5. 100% | 130.5 MiB/s | 133.6 KiB | 00m00s [ 80/150] Installing p11-kit-trust-0:0. 100% | 16.8 MiB/s | 465.0 KiB | 00m00s [ 81/150] Installing zstd-0:1.5.7-1.fc4 100% | 68.5 MiB/s | 1.5 MiB | 00m00s [ 82/150] Installing util-linux-core-0: 100% | 95.4 MiB/s | 2.4 MiB | 00m00s [ 83/150] Installing tar-2:1.35-5.fc42. 100% | 111.3 MiB/s | 3.0 MiB | 00m00s [ 84/150] Installing libsemanage-0:3.8- 100% | 117.8 MiB/s | 361.8 KiB | 00m00s [ 85/150] Installing shadow-utils-2:4.1 100% | 108.2 MiB/s | 4.5 MiB | 00m00s [ 86/150] Installing systemd-standalone 100% | 20.1 MiB/s | 329.9 KiB | 00m00s [ 87/150] Installing zip-0:3.0-43.fc42. 100% | 41.6 MiB/s | 766.4 KiB | 00m00s [ 88/150] Installing libfdisk-0:2.40.4- 100% | 205.0 MiB/s | 419.9 KiB | 00m00s [ 89/150] Installing bzip2-0:1.0.8-20.f 100% | 10.1 MiB/s | 175.8 KiB | 00m00s [ 90/150] Installing libxml2-0:2.12.9-2 100% | 90.1 MiB/s | 1.9 MiB | 00m00s [ 91/150] Installing add-determinism-0: 100% | 98.4 MiB/s | 2.2 MiB | 00m00s [ 92/150] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 93/150] Installing filesystem-srpm-ma 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [ 94/150] Installing ed-0:1.21-2.fc42.a 100% | 9.6 MiB/s | 156.8 KiB | 00m00s [ 95/150] Installing patch-0:2.7.6-26.f 100% | 16.1 MiB/s | 263.9 KiB | 00m00s [ 96/150] Installing elfutils-default-y 100% | 255.4 KiB/s | 2.0 KiB | 00m00s [ 97/150] Installing elfutils-libs-0:0. 100% | 182.7 MiB/s | 748.5 KiB | 00m00s [ 98/150] Installing cpio-0:2.15-2.fc41 100% | 53.1 MiB/s | 1.2 MiB | 00m00s [ 99/150] Installing diffutils-0:3.10-9 100% | 69.9 MiB/s | 1.6 MiB | 00m00s [100/150] Installing sqlite-libs-0:3.49 100% | 250.2 MiB/s | 1.5 MiB | 00m00s [101/150] Installing libgomp-0:15.0.1-0 100% | 250.3 MiB/s | 512.6 KiB | 00m00s [102/150] Installing jansson-0:2.14-2.f 100% | 92.3 MiB/s | 94.5 KiB | 00m00s [103/150] Installing libpkgconf-0:2.3.0 100% | 132.0 MiB/s | 135.1 KiB | 00m00s [104/150] Installing pkgconf-0:2.3.0-2. 100% | 7.0 MiB/s | 114.9 KiB | 00m00s [105/150] Installing pkgconf-pkg-config 100% | 118.2 KiB/s | 1.8 KiB | 00m00s [106/150] Installing json-c-0:0.18-2.fc 100% | 136.7 MiB/s | 139.9 KiB | 00m00s [107/150] Installing libnghttp2-0:1.64. 100% | 194.5 MiB/s | 199.2 KiB | 00m00s [108/150] Installing xxhash-libs-0:0.8. 100% | 85.3 MiB/s | 87.4 KiB | 00m00s [109/150] Installing libbrotli-0:1.1.0- 100% | 222.6 MiB/s | 911.7 KiB | 00m00s [110/150] Installing keyutils-libs-0:1. 100% | 97.4 MiB/s | 99.8 KiB | 00m00s [111/150] Installing libcom_err-0:1.47. 100% | 109.5 MiB/s | 112.2 KiB | 00m00s [112/150] Installing libverto-0:0.3.2-1 100% | 69.5 MiB/s | 71.2 KiB | 00m00s [113/150] Installing libtool-ltdl-0:2.5 100% | 92.9 MiB/s | 95.1 KiB | 00m00s [114/150] Installing gdbm-libs-1:1.23-9 100% | 230.1 MiB/s | 235.7 KiB | 00m00s [115/150] Installing cyrus-sasl-lib-0:2 100% | 100.7 MiB/s | 2.4 MiB | 00m00s [116/150] Installing coreutils-common-0 100% | 301.5 MiB/s | 11.2 MiB | 00m00s [117/150] Installing openssl-libs-1:3.2 100% | 301.6 MiB/s | 6.3 MiB | 00m00s [118/150] Installing coreutils-0:9.6-2. 100% | 166.6 MiB/s | 8.2 MiB | 00m00s [119/150] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s [120/150] Installing libarchive-0:3.7.7 100% | 178.2 MiB/s | 912.6 KiB | 00m00s [121/150] Installing krb5-libs-0:1.21.3 100% | 230.2 MiB/s | 2.5 MiB | 00m00s [122/150] Installing libssh-0:0.11.1-4. 100% | 191.2 MiB/s | 587.5 KiB | 00m00s [123/150] Installing gzip-0:1.13-3.fc42 100% | 22.1 MiB/s | 430.2 KiB | 00m00s [124/150] Installing rpm-sequoia-0:1.7. 100% | 287.2 MiB/s | 2.3 MiB | 00m00s [125/150] Installing rpm-libs-0:4.20.1- 100% | 239.3 MiB/s | 735.1 KiB | 00m00s [126/150] Installing rpm-build-libs-0:4 100% | 194.7 MiB/s | 199.4 KiB | 00m00s [127/150] Installing libevent-0:2.1.12- 100% | 271.3 MiB/s | 1.1 MiB | 00m00s [128/150] Installing openldap-0:2.6.9-3 100% | 171.2 MiB/s | 701.1 KiB | 00m00s [129/150] Installing libcurl-0:8.12.1-1 100% | 209.8 MiB/s | 859.2 KiB | 00m00s [130/150] Installing elfutils-debuginfo 100% | 8.9 MiB/s | 146.5 KiB | 00m00s [131/150] Installing elfutils-0:0.192-9 100% | 125.7 MiB/s | 3.1 MiB | 00m00s [132/150] Installing binutils-0:2.44-3. 100% | 264.6 MiB/s | 29.4 MiB | 00m00s [133/150] Installing gdb-minimal-0:16.2 100% | 224.9 MiB/s | 13.0 MiB | 00m00s [134/150] Installing debugedit-0:5.1-5. 100% | 14.2 MiB/s | 247.3 KiB | 00m00s [135/150] Installing curl-0:8.12.1-1.fc 100% | 15.9 MiB/s | 455.7 KiB | 00m00s [136/150] Installing rpm-0:4.20.1-1.fc4 100% | 72.1 MiB/s | 2.7 MiB | 00m00s [137/150] Installing efi-srpm-macros-0: 100% | 40.1 MiB/s | 41.1 KiB | 00m00s [138/150] Installing tree-sitter-srpm-m 100% | 7.2 MiB/s | 7.4 KiB | 00m00s [139/150] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [140/150] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [141/150] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [142/150] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [143/150] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [144/150] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [145/150] Installing redhat-rpm-config- 100% | 63.0 MiB/s | 193.5 KiB | 00m00s [146/150] Installing rpm-build-0:4.20.1 100% | 27.4 MiB/s | 533.0 KiB | 00m00s [147/150] Installing pyproject-srpm-mac 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [148/150] Installing util-linux-0:2.40. 100% | 122.7 MiB/s | 6.6 MiB | 00m00s [149/150] Installing which-0:2.23-1.fc4 100% | 7.2 MiB/s | 125.6 KiB | 00m00s [150/150] Installing info-0:7.2-3.fc42. 100% | 197.2 KiB/s | 422.0 KiB | 00m02s Warning: skipped OpenPGP checks for 143 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.6.0-1.fc43.aarch64 alternatives-1.31-3.fc42.aarch64 ansible-srpm-macros-1-17.1.fc42.noarch audit-libs-4.0.3-2.fc42.aarch64 bash-5.2.37-3.fc43.aarch64 binutils-2.44-3.fc43.aarch64 build-reproducibility-srpm-macros-0.6.0-1.fc43.noarch bzip2-1.0.8-20.fc42.aarch64 bzip2-libs-1.0.8-20.fc42.aarch64 ca-certificates-2024.2.69_v8.0.401-5.fc42.noarch coreutils-9.6-2.fc43.aarch64 coreutils-common-9.6-2.fc43.aarch64 cpio-2.15-2.fc41.aarch64 crypto-policies-20250214-1.gitff7551b.fc43.noarch curl-8.12.1-1.fc43.aarch64 cyrus-sasl-lib-2.1.28-30.fc42.aarch64 debugedit-5.1-5.fc43.aarch64 diffutils-3.10-9.fc42.aarch64 dwz-0.15-9.fc42.aarch64 ed-1.21-2.fc42.aarch64 efi-srpm-macros-6-2.fc42.noarch elfutils-0.192-9.fc41.aarch64 elfutils-debuginfod-client-0.192-9.fc41.aarch64 elfutils-default-yama-scope-0.192-9.fc41.noarch elfutils-libelf-0.192-9.fc41.aarch64 elfutils-libs-0.192-9.fc41.aarch64 fedora-gpg-keys-43-0.1.noarch fedora-release-43-0.5.noarch fedora-release-common-43-0.5.noarch fedora-release-identity-basic-43-0.5.noarch fedora-repos-43-0.1.noarch fedora-repos-rawhide-43-0.1.noarch file-5.46-1.fc42.aarch64 file-libs-5.46-1.fc42.aarch64 filesystem-3.18-38.fc43.aarch64 filesystem-srpm-macros-3.18-38.fc43.noarch findutils-4.10.0-5.fc42.aarch64 fonts-srpm-macros-2.0.5-21.fc42.noarch forge-srpm-macros-0.4.0-2.fc42.noarch fpc-srpm-macros-1.3-14.fc42.noarch gawk-5.3.1-1.fc42.aarch64 gdb-minimal-16.2-2.fc43.aarch64 gdbm-libs-1.23-9.fc42.aarch64 ghc-srpm-macros-1.9.2-2.fc42.noarch glibc-2.41.9000-1.fc43.aarch64 glibc-common-2.41.9000-1.fc43.aarch64 glibc-gconv-extra-2.41.9000-1.fc43.aarch64 glibc-minimal-langpack-2.41.9000-1.fc43.aarch64 gmp-6.3.0-3.fc43.aarch64 gnat-srpm-macros-6-7.fc42.noarch go-srpm-macros-3.6.0-6.fc42.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-10.fc42.aarch64 gzip-1.13-3.fc42.aarch64 info-7.2-3.fc42.aarch64 jansson-2.14-2.fc42.aarch64 json-c-0.18-2.fc42.aarch64 kernel-srpm-macros-1.0-25.fc42.noarch keyutils-libs-1.6.3-5.fc42.aarch64 krb5-libs-1.21.3-5.fc42.aarch64 libacl-2.3.2-3.fc42.aarch64 libarchive-3.7.7-3.fc43.aarch64 libattr-2.5.2-5.fc42.aarch64 libblkid-2.40.4-7.fc43.aarch64 libbrotli-1.1.0-6.fc42.aarch64 libcap-2.73-2.fc42.aarch64 libcap-ng-0.8.5-4.fc42.aarch64 libcom_err-1.47.2-3.fc42.aarch64 libcurl-8.12.1-1.fc43.aarch64 libeconf-0.7.6-1.fc43.aarch64 libevent-2.1.12-15.fc42.aarch64 libfdisk-2.40.4-7.fc43.aarch64 libffi-3.4.6-5.fc42.aarch64 libgcc-15.0.1-0.8.fc43.aarch64 libgomp-15.0.1-0.8.fc43.aarch64 libidn2-2.3.7-3.fc42.aarch64 libmount-2.40.4-7.fc43.aarch64 libnghttp2-1.64.0-3.fc42.aarch64 libpkgconf-2.3.0-2.fc42.aarch64 libpsl-0.21.5-5.fc42.aarch64 libselinux-3.8-1.fc42.aarch64 libsemanage-3.8-1.fc42.aarch64 libsepol-3.8-1.fc42.aarch64 libsmartcols-2.40.4-7.fc43.aarch64 libssh-0.11.1-4.fc42.aarch64 libssh-config-0.11.1-4.fc42.noarch libstdc++-15.0.1-0.8.fc43.aarch64 libtasn1-4.20.0-1.fc43.aarch64 libtool-ltdl-2.5.4-4.fc42.aarch64 libunistring-1.1-9.fc42.aarch64 libuuid-2.40.4-7.fc43.aarch64 libverto-0.3.2-10.fc42.aarch64 libxcrypt-4.4.38-6.fc43.aarch64 libxml2-2.12.9-2.fc42.aarch64 libzstd-1.5.7-1.fc43.aarch64 lua-libs-5.4.7-2.fc42.aarch64 lua-srpm-macros-1-15.fc42.noarch lz4-libs-1.10.0-2.fc42.aarch64 mpfr-4.2.1-6.fc42.aarch64 ncurses-base-6.5-5.20250125.fc42.noarch ncurses-libs-6.5-5.20250125.fc42.aarch64 ocaml-srpm-macros-10-4.fc42.noarch openblas-srpm-macros-2-19.fc42.noarch openldap-2.6.9-3.fc42.aarch64 openssl-libs-3.2.4-2.fc43.aarch64 p11-kit-0.25.5-5.fc42.aarch64 p11-kit-trust-0.25.5-5.fc42.aarch64 package-notes-srpm-macros-0.5-13.fc42.noarch pam-libs-1.7.0-4.fc42.aarch64 patch-2.7.6-26.fc42.aarch64 pcre2-10.45-1.fc43.aarch64 pcre2-syntax-10.45-1.fc43.noarch perl-srpm-macros-1-57.fc42.noarch pkgconf-2.3.0-2.fc42.aarch64 pkgconf-m4-2.3.0-2.fc42.noarch pkgconf-pkg-config-2.3.0-2.fc42.aarch64 popt-1.19-8.fc42.aarch64 publicsuffix-list-dafsa-20250116-1.fc42.noarch pyproject-srpm-macros-1.17.0-1.fc43.noarch python-srpm-macros-3.13-4.fc42.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.8.2-2.fc43.noarch readline-8.2-12.fc42.aarch64 redhat-rpm-config-342-2.fc42.noarch rpm-4.20.1-1.fc43.aarch64 rpm-build-4.20.1-1.fc43.aarch64 rpm-build-libs-4.20.1-1.fc43.aarch64 rpm-libs-4.20.1-1.fc43.aarch64 rpm-sequoia-1.7.0-5.fc43.aarch64 rust-srpm-macros-26.3-4.fc42.noarch sed-4.9-4.fc42.aarch64 setup-2.15.0-12.fc43.noarch shadow-utils-4.17.0-4.fc42.aarch64 sqlite-libs-3.49.0-1.fc43.aarch64 systemd-libs-257.3-7.fc43.aarch64 systemd-standalone-sysusers-257.3-7.fc43.aarch64 tar-1.35-5.fc42.aarch64 tree-sitter-srpm-macros-0.1.0-8.fc42.noarch unzip-6.0-66.fc42.aarch64 util-linux-2.40.4-7.fc43.aarch64 util-linux-core-2.40.4-7.fc43.aarch64 which-2.23-1.fc42.aarch64 xxhash-libs-0.8.3-2.fc42.aarch64 xz-5.6.3-3.fc42.aarch64 xz-libs-5.6.3-3.fc42.aarch64 zig-srpm-macros-1-4.fc42.noarch zip-3.0-43.fc42.aarch64 zlib-ng-compat-2.2.4-2.fc43.aarch64 zstd-1.5.7-1.fc43.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1740528000 Wrote: /builddir/build/SRPMS/R-Rhtslib-2.4.1-4.fc43.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-aarch64-1740738339.692994/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-wms__1gy/R-Rhtslib/R-Rhtslib.spec) Config(child) 0 minutes 24 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-Rhtslib-2.4.1-4.fc43.src.rpm) Config(fedora-41-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1740738339.692994/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-aarch64-bootstrap-1740738339.692994/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-aarch64-1740738339.692994/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.20.0-1.fc41.aarch64 rpm-sequoia-1.7.0-5.fc41.aarch64 dnf5-5.2.10.0-2.fc41.aarch64 dnf5-plugins-5.2.10.0-2.fc41.aarch64 Finish: chroot init Start: build phase for R-Rhtslib-2.4.1-4.fc43.src.rpm Start: build setup for R-Rhtslib-2.4.1-4.fc43.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1740528000 Wrote: /builddir/build/SRPMS/R-Rhtslib-2.4.1-4.fc43.src.rpm Updating and loading repositories: fedora 100% | 187.8 KiB/s | 16.0 KiB | 00m00s updates 100% | 49.5 KiB/s | 14.1 KiB | 00m00s Copr repository 100% | 96.1 KiB/s | 1.5 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 132.1 KiB/s | 3.8 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-devel aarch64 4.4.2-5.fc43 copr_base 0.0 B bzip2-devel aarch64 1.0.8-20.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 309.8 KiB libcurl-devel aarch64 8.12.1-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB xz-devel aarch64 1:5.6.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 255.6 KiB zlib-ng-compat-devel aarch64 2.2.4-2.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 107.0 KiB Installing dependencies: R-core aarch64 4.4.2-5.fc43 copr_base 101.8 MiB R-core-devel aarch64 4.4.2-5.fc43 copr_base 396.0 KiB R-java aarch64 4.4.2-5.fc43 copr_base 0.0 B R-java-devel aarch64 4.4.2-5.fc43 copr_base 0.0 B R-rpm-macros noarch 1.2.1-12.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 5.6 KiB abattis-cantarell-vf-fonts noarch 0.301-14.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.7 KiB alsa-lib aarch64 1.2.13-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB annobin-docs noarch 12.88-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.6 KiB annobin-plugin-gcc aarch64 12.88-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB avahi-libs aarch64 0.9~rc2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 230.4 KiB brotli aarch64 1.1.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.6 KiB brotli-devel aarch64 1.1.0-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 65.6 KiB cairo aarch64 1.18.2-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 MiB cmake-filesystem aarch64 4.0.0~rc2-3.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B cpp aarch64 15.0.1-0.8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35.4 MiB cups-filesystem noarch 1:2.4.11-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B cups-libs aarch64 1:2.4.11-13.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 666.9 KiB dbus-libs aarch64 1:1.16.0-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 397.5 KiB default-fonts-core-sans noarch 4.2-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 11.9 KiB desktop-file-utils aarch64 0.27-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 317.9 KiB emacs-filesystem noarch 1:30.0-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B flexiblas aarch64 3.4.5-1.fc43 copr_base 50.4 KiB flexiblas-devel aarch64 3.4.5-1.fc43 copr_base 5.0 MiB flexiblas-netlib aarch64 3.4.5-1.fc43 copr_base 9.3 MiB flexiblas-netlib64 aarch64 3.4.5-1.fc43 copr_base 9.1 MiB flexiblas-openblas-openmp aarch64 3.4.5-1.fc43 copr_base 67.3 KiB flexiblas-openblas-openmp64 aarch64 3.4.5-1.fc43 copr_base 67.3 KiB fontconfig aarch64 2.16.0-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB fonts-filesystem noarch 1:2.0.5-21.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 0.0 B freetype aarch64 2.13.3-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 814.5 KiB fribidi aarch64 1.0.16-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 246.3 KiB gcc aarch64 15.0.1-0.8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 98.4 MiB gcc-c++ aarch64 15.0.1-0.8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38.7 MiB gcc-gfortran aarch64 15.0.1-0.8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 36.6 MiB gcc-plugin-annobin aarch64 15.0.1-0.8.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69.2 KiB glib2 aarch64 2.83.2-6.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.3 MiB glibc-devel aarch64 2.41.9000-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.2 MiB gnutls aarch64 3.8.9-4.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.4 MiB google-noto-fonts-common noarch 20250201-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17.7 KiB google-noto-sans-vf-fonts noarch 20250201-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB graphite2 aarch64 1.3.14-18.fc42 copr_base 239.6 KiB harfbuzz aarch64 10.3.0-1.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.6 MiB java-21-openjdk aarch64 1:21.0.6.0.7-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.4 MiB java-21-openjdk-devel aarch64 1:21.0.6.0.7-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 15.6 MiB java-21-openjdk-headless aarch64 1:21.0.6.0.7-7.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 210.3 MiB javapackages-filesystem noarch 6.4.0-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.0 KiB jbigkit-libs aarch64 2.1-31.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 181.5 KiB kernel-headers aarch64 6.14.0-0.rc4.36.fc43 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.4 MiB keyutils-libs-devel aarch64 1.6.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 48.2 KiB krb5-devel aarch64 1.21.3-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 705.9 KiB less aarch64 668-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 549.7 KiB libICE aarch64 1.1.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 222.4 KiB libRmath aarch64 4.4.2-5.fc43 copr_base 214.9 KiB libRmath-devel aarch64 4.4.2-5.fc43 copr_base 17.4 KiB libSM aarch64 1.2.5-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 129.1 KiB libX11 aarch64 1.8.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 MiB libX11-common noarch 1.8.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB libX11-devel aarch64 1.8.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 MiB libX11-xcb aarch64 1.8.11-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.0 KiB libXau aarch64 1.0.12-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121.0 KiB libXau-devel aarch64 1.0.12-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.5 KiB libXcomposite aarch64 0.4.6-5.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 96.5 KiB libXext aarch64 1.3.6-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 145.9 KiB libXft aarch64 2.3.8-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 192.4 KiB libXi aarch64 1.8.2-2.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 72.5 KiB libXmu aarch64 1.2.1-3.fc42 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863.3 KiB xorg-x11-proto-devel noarch 2024.1-4.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.7 MiB Transaction Summary: Installing: 137 packages Total size of inbound packages is 247 MiB. 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[ 1/137] R-devel-0:4.4.2-5.fc43.aarch6 100% | 298.9 KiB/s | 9.3 KiB | 00m00s [ 2/137] bzip2-devel-0:1.0.8-20.fc42.a 100% | 4.3 MiB/s | 213.7 KiB | 00m00s [ 3/137] zlib-ng-compat-devel-0:2.2.4- 100% | 2.9 MiB/s | 38.3 KiB | 00m00s [ 4/137] libcurl-devel-0:8.12.1-1.fc43 100% | 12.0 MiB/s | 809.2 KiB | 00m00s [ 5/137] xz-devel-1:5.6.3-3.fc42.aarch 100% | 1.6 MiB/s | 62.3 KiB | 00m00s [ 6/137] cmake-filesystem-0:4.0.0~rc2- 100% | 1.9 MiB/s | 17.7 KiB | 00m00s [ 7/137] brotli-devel-0:1.1.0-6.fc42.a 100% | 3.0 MiB/s | 33.9 KiB | 00m00s [ 8/137] brotli-0:1.1.0-6.fc42.aarch64 100% | 2.7 MiB/s | 19.6 KiB | 00m00s [ 9/137] krb5-devel-0:1.21.3-5.fc42.aa 100% | 13.0 MiB/s | 133.4 KiB | 00m00s [ 10/137] libkadm5-0:1.21.3-5.fc42.aarc 100% | 7.0 MiB/s | 78.5 KiB | 00m00s [ 11/137] libidn2-devel-0:2.3.7-3.fc42. 100% | 5.6 MiB/s | 63.0 KiB | 00m00s [ 12/137] libpsl-devel-0:0.21.5-5.fc42. 100% | 8.1 MiB/s | 33.2 KiB | 00m00s [ 13/137] libnghttp2-devel-0:1.64.0-3.f 100% | 4.2 MiB/s | 55.7 KiB | 00m00s [ 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78/137] libxcb-0:1.17.0-5.fc42.aarch6 100% | 25.7 MiB/s | 236.8 KiB | 00m00s [ 79/137] graphite2-0:1.3.14-18.fc42.aa 100% | 10.0 MiB/s | 92.3 KiB | 00m00s [ 80/137] xorg-x11-proto-devel-0:2024.1 100% | 23.6 MiB/s | 265.8 KiB | 00m00s [ 81/137] gnutls-0:3.8.9-4.fc43.aarch64 100% | 63.5 MiB/s | 1.1 MiB | 00m00s [ 82/137] nettle-0:3.10.1-1.fc43.aarch6 100% | 25.9 MiB/s | 424.7 KiB | 00m00s [ 83/137] libmpc-0:1.3.1-7.fc42.aarch64 100% | 10.0 MiB/s | 71.3 KiB | 00m00s [ 84/137] glibc-devel-0:2.41.9000-1.fc4 100% | 32.6 MiB/s | 567.4 KiB | 00m00s [ 85/137] libasan-0:15.0.1-0.8.fc43.aar 100% | 36.6 MiB/s | 486.8 KiB | 00m00s [ 86/137] libatomic-0:15.0.1-0.8.fc43.a 100% | 4.7 MiB/s | 29.1 KiB | 00m00s [ 87/137] libubsan-0:15.0.1-0.8.fc43.aa 100% | 40.9 MiB/s | 209.2 KiB | 00m00s [ 88/137] default-fonts-core-sans-0:4.2 100% | 4.1 MiB/s | 25.2 KiB | 00m00s [ 89/137] fonts-filesystem-1:2.0.5-21.f 100% | 861.2 KiB/s | 8.6 KiB | 00m00s [ 90/137] xml-common-0:0.6.3-66.fc42.no 100% | 5.1 MiB/s | 31.2 KiB | 00m00s [ 91/137] abattis-cantarell-vf-fonts-0: 100% | 16.8 MiB/s | 120.3 KiB | 00m00s [ 92/137] emacs-filesystem-1:30.0-4.fc4 100% | 817.3 KiB/s | 7.4 KiB | 00m00s [ 93/137] google-noto-fonts-common-0:20 100% | 2.4 MiB/s | 17.0 KiB | 00m00s [ 94/137] google-noto-sans-vf-fonts-0:2 100% | 42.9 MiB/s | 614.5 KiB | 00m00s [ 95/137] flexiblas-0:3.4.5-1.fc43.aarc 100% | 8.7 MiB/s | 26.7 KiB | 00m00s [ 96/137] flexiblas-openblas-openmp-0:3 100% | 8.3 MiB/s | 17.0 KiB | 00m00s [ 97/137] pixman-0:0.44.2-2.fc42.aarch6 100% | 16.2 MiB/s | 198.7 KiB | 00m00s [ 98/137] flexiblas-netlib64-0:3.4.5-1. 100% | 228.4 MiB/s | 2.7 MiB | 00m00s [ 99/137] java-21-openjdk-1:21.0.6.0.7- 100% | 45.0 MiB/s | 414.6 KiB | 00m00s [100/137] java-21-openjdk-devel-1:21.0. 100% | 134.7 MiB/s | 5.0 MiB | 00m00s [101/137] R-java-0:4.4.2-5.fc43.aarch64 100% | 757.3 KiB/s | 9.8 KiB | 00m00s [102/137] libXau-devel-0:1.0.12-2.fc42. 100% | 1.5 MiB/s | 14.0 KiB | 00m00s [103/137] libXau-0:1.0.12-2.fc42.aarch6 100% | 4.1 MiB/s | 33.8 KiB | 00m00s [104/137] alsa-lib-0:1.2.13-4.fc42.aarc 100% | 40.7 MiB/s | 458.4 KiB | 00m00s [105/137] cups-libs-1:2.4.11-13.fc43.aa 100% | 16.9 MiB/s | 259.9 KiB | 00m00s [106/137] cups-filesystem-1:2.4.11-13.f 100% | 1.3 MiB/s | 13.6 KiB | 00m00s [107/137] javapackages-filesystem-0:6.4 100% | 1.7 MiB/s | 14.1 KiB | 00m00s [108/137] lksctp-tools-0:1.0.20-2.fc42. 100% | 15.7 MiB/s | 96.3 KiB | 00m00s [109/137] nss-0:3.108.0-3.fc43.aarch64 100% | 40.3 MiB/s | 700.7 KiB | 00m00s [110/137] nss-sysinit-0:3.108.0-3.fc43. 100% | 1.3 MiB/s | 19.2 KiB | 00m00s [111/137] tzdata-java-0:2025a-1.fc43.no 100% | 2.4 MiB/s | 46.5 KiB | 00m00s [112/137] R-core-0:4.4.2-5.fc43.aarch64 100% | 114.4 MiB/s | 63.2 MiB | 00m01s [113/137] libXcomposite-0:0.4.6-5.fc42. 100% | 415.0 KiB/s | 24.5 KiB | 00m00s [114/137] libXtst-0:1.2.5-2.fc42.aarch6 100% | 3.4 MiB/s | 20.7 KiB | 00m00s [115/137] libXi-0:1.8.2-2.fc42.aarch64 100% | 3.9 MiB/s | 39.8 KiB | 00m00s [116/137] xorg-x11-fonts-Type1-0:7.5-40 100% | 44.5 MiB/s | 501.8 KiB | 00m00s [117/137] libxcrypt-devel-0:4.4.38-6.fc 100% | 3.2 MiB/s | 29.2 KiB | 00m00s [118/137] kernel-headers-0:6.14.0-0.rc4 100% | 66.9 MiB/s | 1.5 MiB | 00m00s [119/137] avahi-libs-0:0.9~rc2-2.fc42.a 100% | 6.5 MiB/s | 66.4 KiB | 00m00s [120/137] dbus-libs-1:1.16.0-3.fc42.aar 100% | 14.2 MiB/s | 145.8 KiB | 00m00s [121/137] openblas-0:0.3.29-1.fc42.aarc 100% | 5.9 MiB/s | 42.3 KiB | 00m00s [122/137] flexiblas-openblas-openmp64-0 100% | 8.3 MiB/s | 17.0 KiB | 00m00s [123/137] openblas-openmp-0:0.3.29-1.fc 100% | 91.8 MiB/s | 3.9 MiB | 00m00s [124/137] mkfontscale-0:1.2.3-2.fc42.aa 100% | 3.8 MiB/s | 31.5 KiB | 00m00s [125/137] ttmkfdir-0:3.0.9-72.fc42.aarc 100% | 4.2 MiB/s | 51.3 KiB | 00m00s [126/137] nspr-0:4.36.0-4.fc43.aarch64 100% | 21.8 MiB/s | 134.0 KiB | 00m00s [127/137] nss-util-0:3.108.0-3.fc43.aar 100% | 8.3 MiB/s | 85.2 KiB | 00m00s [128/137] openblas-openmp64-0:0.3.29-1. 100% | 51.3 MiB/s | 3.7 MiB | 00m00s [129/137] nss-softokn-0:3.108.0-3.fc43. 100% | 25.0 MiB/s | 409.2 KiB | 00m00s [130/137] nss-softokn-freebl-0:3.108.0- 100% | 9.7 MiB/s | 298.0 KiB | 00m00s [131/137] libfontenc-0:1.1.8-3.fc42.aar 100% | 1.1 MiB/s | 32.6 KiB | 00m00s [132/137] tk8-1:8.6.15-5.fc42.aarch64 100% | 29.1 MiB/s | 1.1 MiB | 00m00s [133/137] tcl8-1:8.6.15-10.fc42.aarch64 100% | 21.8 MiB/s | 1.1 MiB | 00m00s [134/137] gcc-plugin-annobin-0:15.0.1-0 100% | 3.4 MiB/s | 41.4 KiB | 00m00s [135/137] annobin-docs-0:12.88-1.fc42.n 100% | 5.0 MiB/s | 91.7 KiB | 00m00s [136/137] java-21-openjdk-headless-1:21 100% | 93.1 MiB/s | 46.7 MiB | 00m01s [137/137] annobin-plugin-gcc-0:12.88-1. 100% | 12.6 MiB/s | 981.1 KiB | 00m00s -------------------------------------------------------------------------------- [137/137] Total 100% | 172.8 MiB/s | 247.3 MiB | 00m01s Running transaction [ 1/139] Verify package files 100% | 152.0 B/s | 137.0 B | 00m01s >>> Running pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.6.0.7-7.f >>> Finished pre-transaction scriptlet: java-21-openjdk-headless-1:21.0.6.0.7-7. >>> [RPM] /var/lib/mock/fedora-41-aarch64-1740738339.692994/root/var/cache/dnf/c [ 2/139] Prepare transaction 100% | 702.0 B/s | 137.0 B | 00m00s [ 3/139] Installing nspr-0:4.36.0-4.fc 100% | 205.8 MiB/s | 421.6 KiB | 00m00s [ 4/139] Installing libgfortran-0:15.0 100% | 329.8 MiB/s | 1.6 MiB | 00m00s [ 5/139] Installing nss-util-0:3.108.0 100% | 212.8 MiB/s | 217.9 KiB | 00m00s [ 6/139] Installing libmpc-0:1.3.1-7.f 100% | 150.6 MiB/s | 154.2 KiB | 00m00s [ 7/139] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 8/139] Installing libpng-2:1.6.47-1. 100% | 264.7 MiB/s | 271.1 KiB | 00m00s [ 9/139] Installing cmake-filesystem-0 100% | 3.6 MiB/s | 7.5 KiB | 00m00s [ 10/139] Installing zlib-ng-compat-dev 100% | 106.0 MiB/s | 108.5 KiB | 00m00s [ 11/139] Installing tcl8-1:8.6.15-10.f 100% | 128.6 MiB/s | 4.4 MiB | 00m00s [ 12/139] Installing openblas-0:0.3.29- 100% | 110.8 MiB/s | 113.5 KiB | 00m00s [ 13/139] Installing libXau-0:1.0.12-2. 100% | 119.6 MiB/s | 122.5 KiB | 00m00s [ 14/139] Installing libxcb-0:1.17.0-5. 100% | 271.0 MiB/s | 2.2 MiB | 00m00s [ 15/139] Installing xorg-x11-proto-dev 100% | 198.1 MiB/s | 1.8 MiB | 00m00s [ 16/139] Installing libICE-0:1.1.2-2.f 100% | 218.5 MiB/s | 223.8 KiB | 00m00s [ 17/139] Installing libRmath-0:4.4.2-5 100% | 210.6 MiB/s | 215.7 KiB | 00m00s [ 18/139] Installing libjpeg-turbo-0:3. 100% | 241.0 MiB/s | 740.3 KiB | 00m00s [ 19/139] Installing make-1:4.4.1-10.fc 100% | 80.5 MiB/s | 1.9 MiB | 00m00s [ 20/139] Installing libtirpc-0:1.3.6-1 100% | 103.7 MiB/s | 212.5 KiB | 00m00s [ 21/139] Installing libicu-0:76.1-4.fc 100% | 338.3 MiB/s | 36.5 MiB | 00m00s [ 22/139] Installing libdeflate-0:1.23- 100% | 160.3 MiB/s | 164.1 KiB | 00m00s [ 23/139] Installing libdeflate-devel-0 100% | 26.6 MiB/s | 27.3 KiB | 00m00s [ 24/139] Installing libicu-devel-0:76. 100% | 150.8 MiB/s | 5.1 MiB | 00m00s [ 25/139] Installing libtirpc-devel-0:1 100% | 85.6 MiB/s | 263.1 KiB | 00m00s [ 26/139] Installing libRmath-devel-0:4 100% | 17.3 MiB/s | 17.7 KiB | 00m00s [ 27/139] Installing libSM-0:1.2.5-2.fc 100% | 127.4 MiB/s | 130.4 KiB | 00m00s [ 28/139] Installing libXau-devel-0:1.0 100% | 2.3 MiB/s | 9.4 KiB | 00m00s [ 29/139] Installing libxcb-devel-0:1.1 100% | 49.5 MiB/s | 3.1 MiB | 00m00s [ 30/139] Installing openblas-openmp-0: 100% | 424.8 MiB/s | 20.4 MiB | 00m00s [ 31/139] Installing flexiblas-0:3.4.5- 100% | 50.4 MiB/s | 51.6 KiB | 00m00s [ 32/139] Installing flexiblas-netlib-0 100% | 210.9 MiB/s | 9.3 MiB | 00m00s [ 33/139] Installing flexiblas-openblas 100% | 66.6 MiB/s | 68.2 KiB | 00m00s [ 34/139] Installing openblas-openmp64- 100% | 429.9 MiB/s | 20.2 MiB | 00m00s [ 35/139] Installing flexiblas-netlib64 100% | 208.0 MiB/s | 9.2 MiB | 00m00s [ 36/139] Installing flexiblas-openblas 100% | 66.6 MiB/s | 68.2 KiB | 00m00s [ 37/139] Installing flexiblas-devel-0: 100% | 208.9 MiB/s | 5.0 MiB | 00m00s [ 38/139] Installing libssh-devel-0:0.1 100% | 176.3 MiB/s | 180.5 KiB | 00m00s [ 39/139] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s [ 40/139] Installing cpp-0:15.0.1-0.8.f 100% | 262.1 MiB/s | 35.4 MiB | 00m00s [ 41/139] Installing nss-softokn-freebl 100% | 181.1 MiB/s | 741.8 KiB | 00m00s [ 42/139] Installing nss-softokn-0:3.10 100% | 359.8 MiB/s | 2.2 MiB | 00m00s [ 43/139] Installing nss-sysinit-0:3.10 100% | 4.1 MiB/s | 71.2 KiB | 00m00s [ 44/139] Installing nss-0:3.108.0-3.fc 100% | 127.4 MiB/s | 1.9 MiB | 00m00s [ 45/139] Installing annobin-docs-0:12. 100% | 97.4 MiB/s | 99.8 KiB | 00m00s [ 46/139] Installing libfontenc-0:1.1.8 100% | 105.6 MiB/s | 108.1 KiB | 00m00s [ 47/139] Installing dbus-libs-1:1.16.0 100% | 194.6 MiB/s | 398.6 KiB | 00m00s [ 48/139] Installing avahi-libs-0:0.9~r 100% | 75.8 MiB/s | 233.0 KiB | 00m00s [ 49/139] Installing kernel-headers-0:6 100% | 142.6 MiB/s | 6.6 MiB | 00m00s [ 50/139] Installing libxcrypt-devel-0: 100% | 16.2 MiB/s | 33.1 KiB | 00m00s [ 51/139] Installing glibc-devel-0:2.41 100% | 120.8 MiB/s | 2.3 MiB | 00m00s [ 52/139] Installing tzdata-java-0:2025 100% | 97.5 MiB/s | 99.8 KiB | 00m00s [ 53/139] Installing lksctp-tools-0:1.0 100% | 26.7 MiB/s | 518.6 KiB | 00m00s [ 54/139] Installing javapackages-files 100% | 5.4 MiB/s | 5.5 KiB | 00m00s [ 55/139] Installing cups-filesystem-1: 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [ 56/139] Installing alsa-lib-0:1.2.13- 100% | 63.2 MiB/s | 1.5 MiB | 00m00s [ 57/139] Installing pixman-0:0.44.2-2. 100% | 213.4 MiB/s | 655.5 KiB | 00m00s [ 58/139] Installing google-noto-fonts- 100% | 0.0 B/s | 18.5 KiB | 00m00s [ 59/139] Installing google-noto-sans-v 100% | 278.3 MiB/s | 1.4 MiB | 00m00s [ 60/139] Installing default-fonts-core 100% | 8.9 MiB/s | 18.2 KiB | 00m00s [ 61/139] Installing emacs-filesystem-1 100% | 75.9 KiB/s | 544.0 B | 00m00s [ 62/139] Installing xml-common-0:0.6.3 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [ 63/139] Installing libubsan-0:15.0.1- 100% | 232.6 MiB/s | 476.3 KiB | 00m00s [ 64/139] Installing libatomic-0:15.0.1 100% | 67.8 MiB/s | 69.5 KiB | 00m00s [ 65/139] Installing libasan-0:15.0.1-0 100% | 256.8 MiB/s | 1.5 MiB | 00m00s [ 66/139] Installing gcc-0:15.0.1-0.8.f 100% | 309.6 MiB/s | 98.5 MiB | 00m00s [ 67/139] Installing gcc-gfortran-0:15. 100% | 257.7 MiB/s | 36.6 MiB | 00m00s [ 68/139] Installing nettle-0:3.10.1-1. 100% | 187.6 MiB/s | 768.4 KiB | 00m00s [ 69/139] Installing gnutls-0:3.8.9-4.f 100% | 311.8 MiB/s | 3.4 MiB | 00m00s [ 70/139] Installing glib2-0:2.83.2-6.f 100% | 243.6 MiB/s | 15.3 MiB | 00m00s [ 71/139] Installing desktop-file-utils 100% | 17.4 MiB/s | 321.6 KiB | 00m00s [ 72/139] Installing xdg-utils-0:1.2.1- 100% | 20.1 MiB/s | 349.5 KiB | 00m00s [ 73/139] Installing cups-libs-1:2.4.11 100% | 163.2 MiB/s | 668.3 KiB | 00m00s [ 74/139] Installing java-21-openjdk-he 100% | 347.1 MiB/s | 210.3 MiB | 00m01s [ 75/139] Installing graphite2-0:1.3.14 100% | 12.4 MiB/s | 241.7 KiB | 00m00s [ 76/139] Installing freetype-0:2.13.3- 100% | 199.3 MiB/s | 816.2 KiB | 00m00s [ 77/139] Installing harfbuzz-0:10.3.0- 100% | 263.9 MiB/s | 2.6 MiB | 00m00s [ 78/139] Installing fontconfig-0:2.16. 100% | 1.2 MiB/s | 1.2 MiB | 00m01s [ 79/139] Installing mkfontscale-0:1.2. 100% | 4.5 MiB/s | 78.4 KiB | 00m00s [ 80/139] Installing ttmkfdir-0:3.0.9-7 100% | 8.6 MiB/s | 159.4 KiB | 00m00s [ 81/139] Installing xorg-x11-fonts-Typ 100% | 829.1 KiB/s | 865.6 KiB | 00m01s [ 82/139] Installing publicsuffix-list- 100% | 161.5 MiB/s | 330.8 KiB | 00m00s [ 83/139] Installing libpsl-devel-0:0.2 100% | 55.5 MiB/s | 113.6 KiB | 00m00s [ 84/139] Installing libdatrie-0:0.2.13 100% | 92.8 MiB/s | 95.0 KiB | 00m00s [ 85/139] Installing libthai-0:0.1.29-1 100% | 197.6 MiB/s | 809.2 KiB | 00m00s [ 86/139] Installing libwebp-0:1.5.0-2. 100% | 267.3 MiB/s | 821.1 KiB | 00m00s [ 87/139] Installing liblerc-0:4.0.0-8. 100% | 267.6 MiB/s | 548.0 KiB | 00m00s [ 88/139] Installing jbigkit-libs-0:2.1 100% | 179.2 MiB/s | 183.5 KiB | 00m00s [ 89/139] Installing libtiff-0:4.7.0-3. 100% | 214.9 MiB/s | 660.2 KiB | 00m00s [ 90/139] Installing fribidi-0:1.0.16-2 100% | 12.8 MiB/s | 248.8 KiB | 00m00s [ 91/139] Installing less-0:668-2.fc42. 100% | 30.0 MiB/s | 553.0 KiB | 00m00s [ 92/139] Installing tre-common-0:0.8.0 100% | 81.2 MiB/s | 83.1 KiB | 00m00s [ 93/139] Installing tre-0:0.8.0-47.201 100% | 67.1 MiB/s | 68.7 KiB | 00m00s [ 94/139] Installing tre-devel-0:0.8.0- 100% | 0.0 B/s | 11.6 KiB | 00m00s [ 95/139] Installing pcre2-utf32-0:10.4 100% | 284.6 MiB/s | 582.8 KiB | 00m00s [ 96/139] Installing pcre2-utf16-0:10.4 100% | 189.8 MiB/s | 583.0 KiB | 00m00s [ 97/139] Installing pcre2-devel-0:10.4 100% | 80.5 MiB/s | 2.1 MiB | 00m00s [ 98/139] Installing libX11-common-0:1. 100% | 108.0 MiB/s | 1.2 MiB | 00m00s [ 99/139] Installing libX11-0:1.8.11-1. 100% | 256.1 MiB/s | 1.3 MiB | 00m00s [100/139] Installing libXext-0:1.3.6-3. 100% | 143.7 MiB/s | 147.1 KiB | 00m00s [101/139] Installing libXrender-0:0.9.1 100% | 69.6 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1.0 MiB | 00m00s Warning: skipped OpenPGP checks for 137 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Complete! Finish: build setup for R-Rhtslib-2.4.1-4.fc43.src.rpm Start: rpmbuild R-Rhtslib-2.4.1-4.fc43.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1740528000 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.eQLWhS Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.usQ57y + umask 022 + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + rm -rf Rhtslib + /usr/bin/mkdir -p Rhtslib + cd Rhtslib + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Rhtslib_2.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + pushd Rhtslib ~/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib/Rhtslib ~/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib Patch #0 (R-Rhtslib-zlibbioc.patch): + echo 'Patch #0 (R-Rhtslib-zlibbioc.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file DESCRIPTION patching file NAMESPACE + echo 'Patch #1 (R-Rhtslib-buildroot-fix.patch):' Patch #1 (R-Rhtslib-buildroot-fix.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file src/Makevars.common + popd ~/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.thfj01 + umask 022 + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Rhtslib + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Su6Egp + umask 022 + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + '[' /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-Rhtslib-2.4.1-build + mkdir /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Rhtslib + mkdir -p /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library + R CMD INSTALL -l /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library Rhtslib * installing *source* package ‘Rhtslib’ ... ** using non-staged installation via StagedInstall field ** libs using C compiler: ‘gcc (GCC) 15.0.1 20250225 (Red Hat 15.0.1-0)’ cd "htslib-1.15.1" && make -f "Makefile.Rhtslib" make[1]: Entering directory '/builddir/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib/Rhtslib/src/htslib-1.15.1' gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.o kfunc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.o kstring.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.o bcf_sr_sort.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.o bgzf.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.o errmod.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.o faidx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o header.o header.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.o hfile.c echo '#define HTS_VERSION_TEXT "1.15.1"' > version.h echo '#define HTS_CC "gcc"' > config_vars.h echo '#define HTS_CPPFLAGS "-I/usr/local/include -D_FILE_OFFSET_BITS=64"' >> config_vars.h echo '#define HTS_CFLAGS "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden"' >> config_vars.h echo '#define HTS_LDFLAGS "-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -fvisibility=hidden"' >> config_vars.h echo '#define HTS_LIBS "-lz -lm -lbz2 -llzma -lcurl"' >> config_vars.h gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.o hts.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_expr.o hts_expr.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.o hts_os.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.o md5.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.o multipart.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.o probaln.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.o realn.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.o regidx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o region.o region.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.o sam.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.o synced_bcf_reader.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.o vcf_sweep.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.o tbx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.o textutils.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.o thread_pool.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.o vcf.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.o vcfutils.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.o cram/cram_codecs.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.o cram/cram_decode.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.o cram/cram_encode.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.o cram/cram_external.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.o cram/cram_index.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.o cram/cram_io.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.o cram/cram_stats.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.o cram/mFILE.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.o cram/open_trace_file.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.o cram/pooled_alloc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.o cram/string_alloc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c In file included from htscodecs/htscodecs/rANS_static4x16pr.c:74: In function ‘RansEncPutSymbol’, inlined from ‘rans_compress_O1_4x16.isra.0’ at htscodecs/htscodecs/rANS_static4x16pr.c:810:2: htscodecs/htscodecs/rANS_word.h:303:28: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 303 | *pptr = (uint8_t *)(ptr-c); | ~~~~^~~ htscodecs/htscodecs/rANS_static4x16pr.c: In function ‘rans_compress_O1_4x16.isra.0’: htscodecs/htscodecs/rANS_static4x16pr.c:793:14: note: ‘ptr’ was declared here 793 | uint8_t* ptr = out_end; | ^~~ gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.o hfile_libcurl.c hfile_libcurl.c: In function ‘libcurl_open’: hfile_libcurl.c:1335:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations] 1335 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD, | ^~ In file included from hfile_libcurl.c:47: /usr/include/curl/curl.h:2897:3: note: declared here 2897 | CURLINFO_CONTENT_LENGTH_DOWNLOAD | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o hfile_libcurl.o ranlib libhts.a gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kfunc.pico kfunc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o kstring.pico kstring.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bcf_sr_sort.pico bcf_sr_sort.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o bgzf.pico bgzf.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o errmod.pico errmod.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o faidx.pico faidx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o header.pico header.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile.pico hfile.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts.pico hts.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_expr.pico hts_expr.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hts_os.pico hts_os.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o md5.pico md5.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o multipart.pico multipart.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o probaln.pico probaln.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o realn.pico realn.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o regidx.pico regidx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o region.pico region.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o sam.pico sam.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o synced_bcf_reader.pico synced_bcf_reader.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf_sweep.pico vcf_sweep.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o tbx.pico tbx.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o textutils.pico textutils.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o thread_pool.pico thread_pool.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcf.pico vcf.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o vcfutils.pico vcfutils.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_codecs.pico cram/cram_codecs.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_decode.pico cram/cram_decode.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_encode.pico cram/cram_encode.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_external.pico cram/cram_external.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_index.pico cram/cram_index.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_io.pico cram/cram_io.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/cram_stats.pico cram/cram_stats.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/mFILE.pico cram/mFILE.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/open_trace_file.pico cram/open_trace_file.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/pooled_alloc.pico cram/pooled_alloc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o cram/string_alloc.pico cram/string_alloc.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/arith_dynamic.pico htscodecs/htscodecs/arith_dynamic.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/fqzcomp_qual.pico htscodecs/htscodecs/fqzcomp_qual.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/htscodecs.pico htscodecs/htscodecs/htscodecs.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/pack.pico htscodecs/htscodecs/pack.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rANS_static4x16pr.pico htscodecs/htscodecs/rANS_static4x16pr.c In file included from htscodecs/htscodecs/rANS_static4x16pr.c:74: In function ‘RansEncPutSymbol’, inlined from ‘rans_compress_O1_4x16.isra.0’ at htscodecs/htscodecs/rANS_static4x16pr.c:810:2: htscodecs/htscodecs/rANS_word.h:303:28: warning: ‘ptr’ may be used uninitialized [-Wmaybe-uninitialized] 303 | *pptr = (uint8_t *)(ptr-c); | ~~~~^~~ htscodecs/htscodecs/rANS_static4x16pr.c: In function ‘rans_compress_O1_4x16.isra.0’: htscodecs/htscodecs/rANS_static4x16pr.c:793:14: note: ‘ptr’ was declared here 793 | uint8_t* ptr = out_end; | ^~~ gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rANS_static.pico htscodecs/htscodecs/rANS_static.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/rle.pico htscodecs/htscodecs/rle.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o htscodecs/htscodecs/tokenise_name3.pico htscodecs/htscodecs/tokenise_name3.c gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -I. -I/usr/local/include -D_FILE_OFFSET_BITS=64 -c -o hfile_libcurl.pico hfile_libcurl.c hfile_libcurl.c: In function ‘libcurl_open’: hfile_libcurl.c:1335:9: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations] 1335 | if (curl_easy_getinfo(fp->easy, CURLINFO_CONTENT_LENGTH_DOWNLOAD, | ^~ In file included from hfile_libcurl.c:47: /usr/include/curl/curl.h:2897:3: note: declared here 2897 | CURLINFO_CONTENT_LENGTH_DOWNLOAD | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -shared -Wl,-soname,libhts.so.3 -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -fvisibility=hidden -o libhts.so kfunc.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico header.pico hfile.pico hts.pico hts_expr.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico region.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_stats.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/string_alloc.pico htscodecs/htscodecs/arith_dynamic.pico htscodecs/htscodecs/fqzcomp_qual.pico htscodecs/htscodecs/htscodecs.pico htscodecs/htscodecs/pack.pico htscodecs/htscodecs/rANS_static4x16pr.pico htscodecs/htscodecs/rANS_static.pico htscodecs/htscodecs/rle.pico htscodecs/htscodecs/tokenise_name3.pico hfile_libcurl.pico -lz -lm -lbz2 -llzma -lcurl -lpthread ln -sf libhts.so libhts.so.3 make[1]: Leaving directory '/builddir/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib/Rhtslib/src/htslib-1.15.1' mkdir -p "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/include/htslib" cd "htslib-1.15.1/htslib" && cp * "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/include/htslib" gcc -I"/usr/include/R" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I"htslib-1.15.1" -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_init_Rhtslib.c -o R_init_Rhtslib.o mkdir -p "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/usrlib" cd "htslib-1.15.1" && cp libhts.so libhts.a "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/usrlib" cd "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/usrlib" && ln -s libhts.so libhts.so.2 gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Rhtslib.so R_init_Rhtslib.o /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/usrlib/libhts.a -lcurl -lbz2 -llzma -lz -L/usr/lib64/R/lib -lR mkdir -p "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/testdata/tabix" cd "htslib-1.15.1/test" && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/testdata" 2>/dev/null || true) && cd tabix && (cp *.sam *.bam *.vcf *.bcf *.cram *.fa *.fa.fai *.gff *.bed "/builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/testdata/tabix" 2>/dev/null || true) installing to /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘Rhtslib’ finding HTML links ... done Rhtslib-package html pkgconfig html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Rhtslib) + test -d Rhtslib/src + cd Rhtslib/src + rm -f R_init_Rhtslib.o Rhtslib.so + rm -f /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/R.css + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.4.1-4.fc43 --unique-debug-suffix -2.4.1-4.fc43.aarch64 --unique-debug-src-base R-Rhtslib-2.4.1-4.fc43.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-Rhtslib-2.4.1-build/Rhtslib find-debuginfo: starting Extracting debug info from 2 files DWARF-compressing 2 files sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-Rhtslib-2.4.1-4.fc43.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT/usr/lib64/R/library/Rhtslib/usrlib/libhts.a: replacing with normalized version Scanned 38 directories and 266 files, processed 10 inodes, 1 modified (1 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-Rhtslib-2.4.1-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.bBQ44q + umask 022 + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Rhtslib + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-Rhtslib-2.4.1-4.fc43.aarch64 Provides: R(Rhtslib) = 2.4.1 R-Rhtslib = 2.4.1-4.fc43 R-Rhtslib(aarch-64) = 2.4.1-4.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.4 R-core ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libR.so()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcurl.so.4()(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Suggests: R(BiocStyle) R(knitr) R(rmarkdown) Processing files: R-Rhtslib-devel-2.4.1-4.fc43.aarch64 Provides: R-Rhtslib-devel = 2.4.1-4.fc43 R-Rhtslib-devel(aarch-64) = 2.4.1-4.fc43 R-Rhtslib-static = 2.4.1-4.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-Rhtslib-debugsource-2.4.1-4.fc43.aarch64 Provides: R-Rhtslib-debugsource = 2.4.1-4.fc43 R-Rhtslib-debugsource(aarch-64) = 2.4.1-4.fc43 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-Rhtslib-debuginfo-2.4.1-4.fc43.aarch64 Provides: R-Rhtslib-debuginfo = 2.4.1-4.fc43 R-Rhtslib-debuginfo(aarch-64) = 2.4.1-4.fc43 debuginfo(build-id) = 7244df580b4ca6f6299df7f01868927bcfe28450 debuginfo(build-id) = 79d776aea3274a338d943f908240331ccd9b01d0 libhts.so-2.4.1-4.fc43.aarch64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-Rhtslib-debugsource(aarch-64) = 2.4.1-4.fc43 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-Rhtslib-2.4.1-build/BUILDROOT Wrote: /builddir/build/RPMS/R-Rhtslib-devel-2.4.1-4.fc43.aarch64.rpm Wrote: /builddir/build/RPMS/R-Rhtslib-debugsource-2.4.1-4.fc43.aarch64.rpm Wrote: /builddir/build/RPMS/R-Rhtslib-debuginfo-2.4.1-4.fc43.aarch64.rpm Wrote: /builddir/build/RPMS/R-Rhtslib-2.4.1-4.fc43.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.qi5Gog + umask 022 + cd /builddir/build/BUILD/R-Rhtslib-2.4.1-build + test -d /builddir/build/BUILD/R-Rhtslib-2.4.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-Rhtslib-2.4.1-build + rm -rf /builddir/build/BUILD/R-Rhtslib-2.4.1-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-Rhtslib-2.4.1-4.fc43.src.rpm Finish: build phase for R-Rhtslib-2.4.1-4.fc43.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-aarch64-1740738339.692994/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/R-Rhtslib-2.4.1-4.fc43.src.rpm) Config(child) 1 minutes 35 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-Rhtslib", "epoch": null, "version": "2.4.1", "release": "4.fc43", "arch": "aarch64" }, { "name": "R-Rhtslib", "epoch": null, "version": "2.4.1", "release": "4.fc43", "arch": "src" }, { "name": "R-Rhtslib-devel", "epoch": null, "version": "2.4.1", "release": "4.fc43", "arch": "aarch64" }, { "name": "R-Rhtslib-debuginfo", "epoch": null, "version": "2.4.1", "release": "4.fc43", "arch": "aarch64" }, { "name": "R-Rhtslib-debugsource", "epoch": null, "version": "2.4.1", "release": "4.fc43", "arch": "aarch64" } ] } RPMResults finished