Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c210' (ED25519) to the list of known hosts. cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading rtracklayer_1.62.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o rtracklayer_1.62.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/R-rtracklayer/rtracklayer_1.62.0.tar.gz/md5/a16a9ca02e49808b38823899860abdb6/rtracklayer_1.62.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3925k 100 3925k 0 0 28.0M 0 --:--:-- --:--:-- --:--:-- 28.1M INFO: Reading stdout from command: md5sum rtracklayer_1.62.0.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer/R-rtracklayer.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725496048.608952 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer/R-rtracklayer.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1725496048.608952 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer/R-rtracklayer.spec) Config(fedora-41-ppc64le) Start: clean chroot Finish: clean chroot Mock Version: 5.6 INFO: Mock Version: 5.6 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-ppc64le-bootstrap-1725496048.608952/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:41 INFO: Pulling image: registry.fedoraproject.org/fedora:41 INFO: Copy content of container registry.fedoraproject.org/fedora:41 to /var/lib/mock/fedora-41-ppc64le-bootstrap-1725496048.608952/root INFO: Checking that registry.fedoraproject.org/fedora:41 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:41 with podman image mount INFO: image registry.fedoraproject.org/fedora:41 as /var/lib/containers/storage/overlay/9fa792a508d5b1b2a1164efd7f7c019513241a30b1bd932d3bb607e77040c420/merged INFO: umounting image registry.fedoraproject.org/fedora:41 (/var/lib/containers/storage/overlay/9fa792a508d5b1b2a1164efd7f7c019513241a30b1bd932d3bb607e77040c420/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-ppc64le-1725496048.608952/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.92-6.fc41.ppc64le rpm-sequoia-1.7.0-2.fc41.ppc64le dnf5-5.2.5.0-2.fc41.ppc64le dnf5-plugins-5.2.5.0-2.fc41.ppc64le Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 52.7 KiB/s | 8.1 KiB | 00m00s fedora 100% | 12.1 MiB/s | 33.2 MiB | 00m03s Copr repository 100% | 16.3 MiB/s | 2.9 MiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 41.5 MiB/s | 13.9 MiB | 00m00s Repositories loaded. 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publicsuffix-list-dafsa noarch 20240107-4.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67.5 KiB pyproject-srpm-macros noarch 1.14.0-1.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 51.0 KiB qt5-srpm-macros noarch 5.15.14-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 456.0 B readline ppc64le 8.2-11.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 881.0 KiB rpm ppc64le 4.19.93-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 MiB rpm-build-libs ppc64le 4.19.93-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 390.6 KiB rpm-libs ppc64le 4.19.93-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB rpm-sequoia ppc64le 1.7.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 MiB rust-srpm-macros noarch 26.3-3.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.8 KiB setup noarch 2.15.0-5.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 720.7 KiB sqlite-libs ppc64le 3.46.1-1.fc41 fedora 2.0 MiB systemd-libs ppc64le 256.5-1.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.0 MiB util-linux-core ppc64le 2.40.2-8.fc42 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.2 MiB xxhash-libs ppc64le 0.8.2-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 211.9 KiB xz-libs ppc64le 1:5.6.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 330.1 KiB zig-srpm-macros noarch 1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 KiB zip ppc64le 3.0-41.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 MiB zlib-ng-compat ppc64le 2.1.7-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 261.7 KiB zstd ppc64le 1.5.6-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 154 packages Total size of inbound packages is 56 MiB. Need to download 56 MiB. After this operation 325 MiB will be used (install 325 MiB, remove 0 B). [ 1/154] bzip2-0:1.0.8-19.fc41.ppc64le 100% | 635.6 KiB/s | 53.4 KiB | 00m00s [ 2/154] bash-0:5.2.32-2.fc42.ppc64le 100% | 14.9 MiB/s | 1.9 MiB | 00m00s [ 3/154] cpio-0:2.15-2.fc41.ppc64le 100% | 6.7 MiB/s | 292.9 KiB | 00m00s [ 4/154] coreutils-0:9.5-9.fc42.ppc64l 100% | 9.5 MiB/s | 1.3 MiB | 00m00s [ 5/154] diffutils-0:3.10-8.fc41.ppc64 100% | 16.7 MiB/s | 409.3 KiB | 00m00s [ 6/154] fedora-release-common-0:42-0. 100% | 1.0 MiB/s | 23.0 KiB | 00m00s [ 7/154] findutils-1:4.10.0-4.fc41.ppc 100% | 24.6 MiB/s | 579.3 KiB | 00m00s [ 8/154] glibc-minimal-langpack-0:2.40 100% | 6.4 MiB/s | 123.9 KiB | 00m00s [ 9/154] gzip-0:1.13-2.fc41.ppc64le 100% | 8.2 MiB/s | 168.1 KiB | 00m00s [ 10/154] gawk-0:5.3.0-4.fc41.ppc64le 100% | 23.8 MiB/s | 1.1 MiB | 00m00s [ 11/154] grep-0:3.11-9.fc41.ppc64le 100% | 6.2 MiB/s | 299.4 KiB | 00m00s [ 12/154] info-0:7.1-3.fc41.ppc64le 100% | 10.3 MiB/s | 201.1 KiB | 00m00s [ 13/154] patch-0:2.7.6-25.fc41.ppc64le 100% | 7.7 MiB/s | 142.1 KiB | 00m00s [ 14/154] redhat-rpm-config-0:294-1.fc4 100% | 4.3 MiB/s | 75.5 KiB | 00m00s [ 15/154] rpm-build-0:4.19.93-1.fc42.pp 100% | 4.2 MiB/s | 77.9 KiB | 00m00s [ 16/154] sed-0:4.9-3.fc41.ppc64le 100% | 14.6 MiB/s | 314.8 KiB | 00m00s [ 17/154] unzip-0:6.0-64.fc41.ppc64le 100% | 8.9 MiB/s | 191.1 KiB | 00m00s [ 18/154] shadow-utils-2:4.15.1-9.fc41. 100% | 25.6 MiB/s | 1.3 MiB | 00m00s [ 19/154] tar-2:1.35-4.fc41.ppc64le 100% | 17.8 MiB/s | 874.3 KiB | 00m00s [ 20/154] which-0:2.21-42.fc41.ppc64le 100% | 2.5 MiB/s | 42.9 KiB | 00m00s [ 21/154] util-linux-0:2.40.2-8.fc42.pp 100% | 30.2 MiB/s | 1.2 MiB | 00m00s [ 22/154] xz-1:5.6.2-2.fc41.ppc64le 100% | 18.1 MiB/s | 462.1 KiB | 00m00s [ 23/154] fedora-repos-0:42-0.1.noarch 100% | 573.1 KiB/s | 9.2 KiB | 00m00s [ 24/154] rpm-0:4.19.93-1.fc42.ppc64le 100% | 19.7 MiB/s | 524.4 KiB | 00m00s [ 25/154] libblkid-0:2.40.2-8.fc42.ppc6 100% | 6.3 MiB/s | 141.6 KiB | 00m00s [ 26/154] coreutils-common-0:9.5-9.fc42 100% | 36.8 MiB/s | 2.1 MiB | 00m00s [ 27/154] libfdisk-0:2.40.2-8.fc42.ppc6 100% | 8.6 MiB/s | 175.7 KiB | 00m00s [ 28/154] libmount-0:2.40.2-8.fc42.ppc6 100% | 8.7 MiB/s | 177.8 KiB | 00m00s [ 29/154] libsmartcols-0:2.40.2-8.fc42. 100% | 6.0 MiB/s | 109.9 KiB | 00m00s [ 30/154] libuuid-0:2.40.2-8.fc42.ppc64 100% | 1.7 MiB/s | 30.5 KiB | 00m00s [ 31/154] util-linux-core-0:2.40.2-8.fc 100% | 23.0 MiB/s | 565.1 KiB | 00m00s [ 32/154] fedora-gpg-keys-0:42-0.1.noar 100% | 6.7 MiB/s | 123.3 KiB | 00m00s [ 33/154] fedora-repos-rawhide-0:42-0.1 100% | 514.3 KiB/s | 8.7 KiB | 00m00s [ 34/154] rpm-libs-0:4.19.93-1.fc42.ppc 100% | 15.7 MiB/s | 354.0 KiB | 00m00s [ 35/154] rpm-build-libs-0:4.19.93-1.fc 100% | 4.6 MiB/s | 107.6 KiB | 00m00s [ 36/154] xz-libs-1:5.6.2-2.fc41.ppc64l 100% | 6.4 MiB/s | 124.8 KiB | 00m00s [ 37/154] libselinux-0:3.7-5.fc41.ppc64 100% | 4.1 MiB/s | 100.2 KiB | 00m00s [ 38/154] libxcrypt-0:4.4.36-7.fc41.ppc 100% | 6.7 MiB/s | 130.3 KiB | 00m00s [ 39/154] glibc-0:2.40-3.fc41.ppc64le 100% | 43.2 MiB/s | 3.3 MiB | 00m00s [ 40/154] ncurses-libs-0:6.5-2.20240629 100% | 11.9 MiB/s | 378.3 KiB | 00m00s [ 41/154] systemd-libs-0:256.5-1.fc42.p 100% | 20.6 MiB/s | 778.6 KiB | 00m00s [ 42/154] audit-libs-0:4.0.2-1.fc41.ppc 100% | 5.8 MiB/s | 142.5 KiB | 00m00s [ 43/154] authselect-libs-0:1.5.0-7.fc4 100% | 9.3 MiB/s | 209.5 KiB | 00m00s [ 44/154] librtas-0:2.0.6-2.fc41.ppc64l 100% | 4.7 MiB/s | 81.3 KiB | 00m00s [ 45/154] libcap-ng-0:0.8.5-3.fc41.ppc6 100% | 1.6 MiB/s | 33.7 KiB | 00m00s [ 46/154] pam-0:1.6.1-6.fc42.ppc64le 100% | 23.9 MiB/s | 562.6 KiB | 00m00s [ 47/154] pam-libs-0:1.6.1-6.fc42.ppc64 100% | 3.4 MiB/s | 63.3 KiB | 00m00s [ 48/154] readline-0:8.2-11.fc42.ppc64l 100% | 11.2 MiB/s | 230.4 KiB | 00m00s [ 49/154] zlib-ng-compat-0:2.1.7-2.fc41 100% | 4.6 MiB/s | 79.3 KiB | 00m00s [ 50/154] bzip2-libs-0:1.0.8-19.fc41.pp 100% | 2.4 MiB/s | 46.7 KiB | 00m00s [ 51/154] libacl-0:2.3.2-2.fc41.ppc64le 100% | 1.6 MiB/s | 27.3 KiB | 00m00s [ 52/154] libcap-0:2.70-4.fc41.ppc64le 100% | 4.8 MiB/s | 93.4 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| 1.2 MiB/s | 20.8 KiB | 00m00s [ 79/154] build-reproducibility-srpm-ma 100% | 589.1 KiB/s | 10.6 KiB | 00m00s [ 80/154] dwz-0:0.15-7.fc41.ppc64le 100% | 5.8 MiB/s | 143.5 KiB | 00m00s [ 81/154] glibc-gconv-extra-0:2.40-3.fc 100% | 27.4 MiB/s | 2.0 MiB | 00m00s [ 82/154] efi-srpm-macros-0:5-12.fc41.n 100% | 1.2 MiB/s | 22.4 KiB | 00m00s [ 83/154] fonts-srpm-macros-1:2.0.5-17. 100% | 1.5 MiB/s | 27.0 KiB | 00m00s [ 84/154] forge-srpm-macros-0:0.3.2-1.f 100% | 1.2 MiB/s | 19.7 KiB | 00m00s [ 85/154] fpc-srpm-macros-0:1.3-13.fc41 100% | 442.3 KiB/s | 8.0 KiB | 00m00s [ 86/154] ghc-srpm-macros-0:1.9.1-2.fc4 100% | 566.0 KiB/s | 9.1 KiB | 00m00s [ 87/154] gnat-srpm-macros-0:6-6.fc41.n 100% | 497.3 KiB/s | 9.0 KiB | 00m00s [ 88/154] go-srpm-macros-0:3.6.0-3.fc41 100% | 1.6 MiB/s | 28.0 KiB | 00m00s [ 89/154] kernel-srpm-macros-0:1.0-24.f 100% | 580.5 KiB/s | 9.9 KiB | 00m00s [ 90/154] lua-srpm-macros-0:1-14.fc41.n 100% | 522.3 KiB/s | 8.9 KiB | 00m00s [ 91/154] ocaml-srpm-macros-0:10-3.fc41 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gdbm-1:1.23-7.fc41.ppc64le 100% | 8.4 MiB/s | 154.4 KiB | 00m00s [105/154] gdbm-libs-1:1.23-7.fc41.ppc64 100% | 3.5 MiB/s | 61.7 KiB | 00m00s [106/154] libnsl2-0:2.0.1-2.fc41.ppc64l 100% | 1.7 MiB/s | 31.8 KiB | 00m00s [107/154] libpwquality-0:1.4.5-11.fc41. 100% | 6.4 MiB/s | 111.5 KiB | 00m00s [108/154] libtirpc-0:1.3.5-0.fc41.ppc64 100% | 5.9 MiB/s | 108.8 KiB | 00m00s [109/154] crypto-policies-0:20240828-1. 100% | 3.1 MiB/s | 69.9 KiB | 00m00s [110/154] ca-certificates-0:2024.2.68_v 100% | 25.7 MiB/s | 868.2 KiB | 00m00s [111/154] ncurses-base-0:6.5-2.20240629 100% | 3.5 MiB/s | 63.8 KiB | 00m00s [112/154] krb5-libs-0:1.21.3-2.fc41.ppc 100% | 26.4 MiB/s | 838.6 KiB | 00m00s [113/154] openssl-libs-1:3.2.2-5.fc41.p 100% | 29.9 MiB/s | 2.5 MiB | 00m00s [114/154] libcom_err-0:1.47.1-3.fc41.pp 100% | 1.0 MiB/s | 27.0 KiB | 00m00s [115/154] libsepol-0:3.7-2.fc41.ppc64le 100% | 16.6 MiB/s | 373.0 KiB | 00m00s [116/154] cracklib-0:2.9.11-6.fc41.ppc6 100% | 4.3 MiB/s | 83.7 KiB | 00m00s [117/154] pcre2-0:10.44-1.fc41.1.ppc64l 100% | 12.3 MiB/s | 251.9 KiB | 00m00s [118/154] keyutils-libs-0:1.6.3-4.fc41. 100% | 1.9 MiB/s | 32.8 KiB | 00m00s [119/154] lz4-libs-0:1.10.0-1.fc41.ppc6 100% | 4.8 MiB/s | 97.7 KiB | 00m00s [120/154] libxml2-0:2.12.8-2.fc41.ppc64 100% | 25.8 MiB/s | 767.3 KiB | 00m00s [121/154] libverto-0:0.3.2-9.fc41.ppc64 100% | 1.3 MiB/s | 22.2 KiB | 00m00s [122/154] basesystem-0:11-21.fc41.noarc 100% | 460.8 KiB/s | 7.4 KiB | 00m00s [123/154] glibc-common-0:2.40-3.fc41.pp 100% | 15.8 MiB/s | 419.9 KiB | 00m00s [124/154] gmp-1:6.3.0-2.fc41.ppc64le 100% | 14.4 MiB/s | 309.0 KiB | 00m00s [125/154] filesystem-0:3.18-23.fc41.ppc 100% | 31.5 MiB/s | 1.1 MiB | 00m00s [126/154] mpfr-0:4.2.1-5.fc41.ppc64le 100% | 13.9 MiB/s | 354.9 KiB | 00m00s [127/154] elfutils-default-yama-scope-0 100% | 683.6 KiB/s | 12.3 KiB | 00m00s [128/154] elfutils-debuginfod-client-0: 100% | 1.7 MiB/s | 39.0 KiB | 00m00s [129/154] p11-kit-0:0.25.5-3.fc41.ppc64 100% | 19.6 MiB/s | 482.4 KiB | 00m00s [130/154] libstdc++-0:14.2.1-1.fc42.ppc 100% | 27.8 MiB/s | 1.0 MiB | 00m00s [131/154] p11-kit-trust-0:0.25.5-3.fc41 100% | 6.9 MiB/s | 148.4 KiB | 00m00s [132/154] alternatives-0:1.30-1.fc41.pp 100% | 2.4 MiB/s | 44.8 KiB | 00m00s [133/154] add-determinism-0:0.3.6-1.fc4 100% | 28.4 MiB/s | 873.8 KiB | 00m00s [134/154] jansson-0:2.13.1-10.fc41.ppc6 100% | 2.4 MiB/s | 49.9 KiB | 00m00s [135/154] pcre2-syntax-0:10.44-1.fc41.1 100% | 7.7 MiB/s | 149.9 KiB | 00m00s [136/154] libffi-0:3.4.6-3.fc42.ppc64le 100% | 2.1 MiB/s | 38.2 KiB | 00m00s [137/154] libtasn1-0:4.19.0-9.fc41.ppc6 100% | 4.1 MiB/s | 79.3 KiB | 00m00s [138/154] fedora-release-0:42-0.3.noarc 100% | 719.3 KiB/s | 12.2 KiB | 00m00s [139/154] fedora-release-identity-basic 100% | 813.4 KiB/s | 13.0 KiB | 00m00s [140/154] libcurl-0:8.9.1-3.fc42.ppc64l 100% | 17.1 MiB/s | 402.7 KiB | 00m00s [141/154] xxhash-libs-0:0.8.2-3.fc41.pp 100% | 2.1 MiB/s | 37.2 KiB | 00m00s [142/154] libbrotli-0:1.1.0-5.fc41.ppc6 100% | 17.0 MiB/s | 382.0 KiB | 00m00s [143/154] libidn2-0:2.3.7-2.fc41.ppc64l 100% | 5.4 MiB/s | 115.1 KiB | 00m00s [144/154] libnghttp2-0:1.63.0-1.fc42.pp 100% | 4.4 MiB/s | 85.8 KiB | 00m00s [145/154] libpsl-0:0.21.5-4.fc41.ppc64l 100% | 3.4 MiB/s | 65.7 KiB | 00m00s [146/154] libssh-config-0:0.11.1-1.fc42 100% | 494.0 KiB/s | 9.4 KiB | 00m00s [147/154] libssh-0:0.11.1-1.fc42.ppc64l 100% | 10.7 MiB/s | 263.2 KiB | 00m00s [148/154] openldap-0:2.6.8-5.fc41.ppc64 100% | 12.8 MiB/s | 288.1 KiB | 00m00s [149/154] gdb-minimal-0:15.1-1.fc42.ppc 100% | 32.3 MiB/s | 4.3 MiB | 00m00s [150/154] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 17.6 MiB/s | 883.1 KiB | 00m00s [151/154] libevent-0:2.1.12-14.fc41.ppc 100% | 8.7 MiB/s | 274.8 KiB | 00m00s [152/154] libtool-ltdl-0:2.4.7-12.fc41. 100% | 2.0 MiB/s | 39.7 KiB | 00m00s [153/154] publicsuffix-list-dafsa-0:202 100% | 3.2 MiB/s | 58.3 KiB | 00m00s [154/154] libunistring-0:1.1-8.fc41.ppc 100% | 20.8 MiB/s | 575.2 KiB | 00m00s -------------------------------------------------------------------------------- [154/154] Total 100% | 38.2 MiB/s | 56.5 MiB | 00m01s Running transaction Importing PGP key 0xE99D6AD1: Userid : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. [ 1/156] Verify package files 100% | 296.0 B/s | 154.0 B | 00m01s >>> Running pre-transaction scriptlet: filesystem-0:3.18-23.fc41.ppc64le >>> Stop pre-transaction scriptlet: filesystem-0:3.18-23.fc41.ppc64le [ 2/156] Prepare transaction 100% | 1.2 KiB/s | 154.0 B | 00m00s [ 3/156] Installing libgcc-0:14.2.1-1. 100% | 114.6 MiB/s | 352.1 KiB | 00m00s >>> Running post-install scriptlet: libgcc-0:14.2.1-1.fc42.ppc64le >>> Stop post-install scriptlet: libgcc-0:14.2.1-1.fc42.ppc64le [ 4/156] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 5/156] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/156] Installing fedora-release-ide 100% | 0.0 B/s | 952.0 B | 00m00s [ 7/156] Installing fedora-repos-rawhi 100% | 2.4 MiB/s | 2.4 KiB | 00m00s [ 8/156] Installing fedora-gpg-keys-0: 100% | 15.3 MiB/s | 172.2 KiB | 00m00s [ 9/156] Installing fedora-repos-0:42- 100% | 5.6 MiB/s | 5.7 KiB | 00m00s [ 10/156] Installing fedora-release-com 100% | 11.6 MiB/s | 23.7 KiB | 00m00s [ 11/156] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/156] Installing setup-0:2.15.0-5.f 100% | 22.2 MiB/s | 726.1 KiB | 00m00s >>> Running post-install scriptlet: setup-0:2.15.0-5.fc41.noarch >>> Stop post-install scriptlet: setup-0:2.15.0-5.fc41.noarch [ 13/156] Installing filesystem-0:3.18- 100% | 1.1 MiB/s | 212.5 KiB | 00m00s [ 14/156] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/156] Installing pcre2-syntax-0:10. 100% | 62.0 MiB/s | 254.1 KiB | 00m00s [ 16/156] Installing ncurses-base-0:6.5 100% | 26.4 MiB/s | 351.7 KiB | 00m00s [ 17/156] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/156] Installing ncurses-libs-0:6.5 100% | 152.2 MiB/s | 2.4 MiB | 00m00s >>> Running pre-install scriptlet: glibc-0:2.40-3.fc41.ppc64le >>> Stop pre-install scriptlet: glibc-0:2.40-3.fc41.ppc64le warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [ 19/156] Installing glibc-0:2.40-3.fc4 100% | 145.0 MiB/s | 14.8 MiB | 00m00s >>> Running post-install scriptlet: glibc-0:2.40-3.fc41.ppc64le >>> Stop post-install scriptlet: glibc-0:2.40-3.fc41.ppc64le [ 20/156] Installing bash-0:5.2.32-2.fc 100% | 155.2 MiB/s | 8.7 MiB | 00m00s >>> Running post-install scriptlet: bash-0:5.2.32-2.fc42.ppc64le >>> Stop post-install scriptlet: bash-0:5.2.32-2.fc42.ppc64le [ 21/156] Installing glibc-common-0:2.4 100% | 131.6 MiB/s | 2.6 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [ 22/156] Installing glibc-gconv-extra- 100% | 220.5 MiB/s | 49.2 MiB | 00m00s >>> Running post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.ppc64le >>> Stop post-install scriptlet: glibc-gconv-extra-0:2.40-3.fc41.ppc64le [ 23/156] Installing zlib-ng-compat-0:2 100% | 85.5 MiB/s | 262.5 KiB | 00m00s [ 24/156] Installing xz-libs-1:5.6.2-2. 100% | 107.8 MiB/s | 331.2 KiB | 00m00s [ 25/156] Installing bzip2-libs-0:1.0.8 100% | 98.5 MiB/s | 201.8 KiB | 00m00s [ 26/156] Installing libuuid-0:2.40.2-8 100% | 96.9 MiB/s | 198.5 KiB | 00m00s [ 27/156] Installing readline-0:8.2-11. 100% | 143.7 MiB/s | 883.1 KiB | 00m00s [ 28/156] Installing popt-0:1.19-7.fc41 100% | 45.5 MiB/s | 279.4 KiB | 00m00s [ 29/156] Installing libblkid-0:2.40.2- 100% | 118.1 MiB/s | 483.8 KiB | 00m00s [ 30/156] Installing libxcrypt-0:4.4.36 100% | 98.0 MiB/s | 401.3 KiB | 00m00s [ 31/156] Installing libattr-0:2.5.2-4. 100% | 192.6 MiB/s | 197.2 KiB | 00m00s [ 32/156] Installing libacl-0:2.3.2-2.f 100% | 192.0 MiB/s | 196.6 KiB | 00m00s [ 33/156] Installing libzstd-0:1.5.6-2. 100% | 138.0 MiB/s | 989.2 KiB | 00m00s [ 34/156] Installing elfutils-libelf-0: 100% | 164.2 MiB/s | 1.3 MiB | 00m00s [ 35/156] Installing gmp-1:6.3.0-2.fc41 100% | 104.1 MiB/s | 852.5 KiB | 00m00s [ 36/156] Installing libstdc++-0:14.2.1 100% | 162.8 MiB/s | 3.9 MiB | 00m00s [ 37/156] Installing libeconf-0:0.6.2-3 100% | 101.4 MiB/s | 207.6 KiB | 00m00s [ 38/156] Installing gdbm-libs-1:1.23-7 100% | 139.1 MiB/s | 427.2 KiB | 00m00s [ 39/156] Installing mpfr-0:4.2.1-5.fc4 100% | 136.5 MiB/s | 978.6 KiB | 00m00s [ 40/156] Installing gawk-0:5.3.0-4.fc4 100% | 167.1 MiB/s | 4.5 MiB | 00m00s [ 41/156] Installing dwz-0:0.15-7.fc41. 100% | 110.4 MiB/s | 452.2 KiB | 00m00s [ 42/156] Installing unzip-0:6.0-64.fc4 100% | 139.6 MiB/s | 858.0 KiB | 00m00s [ 43/156] Installing file-libs-0:5.45-7 100% | 240.2 MiB/s | 10.1 MiB | 00m00s [ 44/156] Installing file-0:5.45-7.fc41 100% | 32.8 MiB/s | 268.9 KiB | 00m00s >>> Running pre-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42. >>> Stop pre-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42.noa [ 45/156] Installing crypto-policies-0: 100% | 11.4 MiB/s | 163.2 KiB | 00m00s >>> Running post-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42 >>> Stop post-install scriptlet: crypto-policies-0:20240828-1.git5f66e81.fc42.no [ 46/156] Installing libsmartcols-0:2.4 100% | 115.4 MiB/s | 354.6 KiB | 00m00s [ 47/156] Installing libcap-ng-0:0.8.5- 100% | 136.2 MiB/s | 418.4 KiB | 00m00s [ 48/156] Installing audit-libs-0:4.0.2 100% | 132.3 MiB/s | 677.3 KiB | 00m00s [ 49/156] Installing pam-libs-0:1.6.1-6 100% | 148.6 MiB/s | 608.8 KiB | 00m00s [ 50/156] Installing libcap-0:2.70-4.fc 100% | 171.9 MiB/s | 1.4 MiB | 00m00s [ 51/156] Installing systemd-libs-0:256 100% | 159.0 MiB/s | 3.0 MiB | 00m00s [ 52/156] Installing lua-libs-0:5.4.6-6 100% | 149.1 MiB/s | 458.1 KiB | 00m00s [ 53/156] Installing libcom_err-0:1.47. 100% | 117.3 MiB/s | 240.2 KiB | 00m00s [ 54/156] Installing libsepol-0:3.7-2.f 100% | 122.7 MiB/s | 1.1 MiB | 00m00s [ 55/156] Installing pcre2-0:10.44-1.fc 100% | 157.9 MiB/s | 970.3 KiB | 00m00s [ 56/156] Installing libselinux-0:3.7-5 100% | 107.5 MiB/s | 330.3 KiB | 00m00s [ 57/156] Installing sed-0:4.9-3.fc41.p 100% | 89.6 MiB/s | 1.0 MiB | 00m00s [ 58/156] Installing grep-0:3.11-9.fc41 100% | 89.2 MiB/s | 1.2 MiB | 00m00s [ 59/156] Installing findutils-1:4.10.0 100% | 120.6 MiB/s | 2.2 MiB | 00m00s [ 60/156] Installing xz-1:5.6.2-2.fc41. 100% | 92.6 MiB/s | 1.5 MiB | 00m00s [ 61/156] Installing libmount-0:2.40.2- 100% | 134.1 MiB/s | 549.1 KiB | 00m00s [ 62/156] Installing lz4-libs-0:1.10.0- 100% | 106.2 MiB/s | 326.3 KiB | 00m00s [ 63/156] Installing alternatives-0:1.3 100% | 107.3 MiB/s | 219.8 KiB | 00m00s [ 64/156] Installing libtasn1-0:4.19.0- 100% | 113.7 MiB/s | 349.2 KiB | 00m00s [ 65/156] Installing libunistring-0:1.1 100% | 144.0 MiB/s | 1.9 MiB | 00m00s [ 66/156] Installing libidn2-0:2.3.7-2. 100% | 64.6 MiB/s | 462.8 KiB | 00m00s [ 67/156] Installing libpsl-0:0.21.5-4. 100% | 96.4 MiB/s | 197.3 KiB | 00m00s [ 68/156] Installing zstd-0:1.5.6-2.fc4 100% | 158.9 MiB/s | 2.1 MiB | 00m00s [ 69/156] Installing util-linux-core-0: 100% | 177.1 MiB/s | 6.2 MiB | 00m00s [ 70/156] Installing tar-2:1.35-4.fc41. 100% | 133.0 MiB/s | 3.2 MiB | 00m00s [ 71/156] Installing libsemanage-0:3.7- 100% | 96.0 MiB/s | 491.3 KiB | 00m00s [ 72/156] Installing shadow-utils-2:4.1 100% | 116.2 MiB/s | 7.4 MiB | 00m00s [ 73/156] Installing zip-0:3.0-41.fc41. 100% | 124.8 MiB/s | 1.2 MiB | 00m00s [ 74/156] Installing gdbm-1:1.23-7.fc41 100% | 113.9 MiB/s | 933.2 KiB | 00m00s [ 75/156] Installing cyrus-sasl-lib-0:2 100% | 161.1 MiB/s | 3.5 MiB | 00m00s [ 76/156] Installing libfdisk-0:2.40.2- 100% | 149.5 MiB/s | 612.2 KiB | 00m00s [ 77/156] Installing bzip2-0:1.0.8-19.f 100% | 105.5 MiB/s | 432.0 KiB | 00m00s [ 78/156] Installing libxml2-0:2.12.8-2 100% | 148.1 MiB/s | 2.5 MiB | 00m00s [ 79/156] Installing sqlite-libs-0:3.46 100% | 133.2 MiB/s | 2.0 MiB | 00m00s [ 80/156] Installing add-determinism-0: 100% | 150.5 MiB/s | 2.4 MiB | 00m00s [ 81/156] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 82/156] Installing ed-0:1.20.2-2.fc41 100% | 92.8 MiB/s | 285.1 KiB | 00m00s [ 83/156] Installing patch-0:2.7.6-25.f 100% | 127.6 MiB/s | 392.1 KiB | 00m00s [ 84/156] Installing elfutils-default-y 100% | 340.5 KiB/s | 2.0 KiB | 00m00s >>> Running post-install scriptlet: elfutils-default-yama-scope-0:0.191-8.fc41.n >>> Stop post-install scriptlet: elfutils-default-yama-scope-0:0.191-8.fc41.noar [ 85/156] Installing elfutils-libs-0:0. 100% | 130.4 MiB/s | 1.0 MiB | 00m00s [ 86/156] Installing cpio-0:2.15-2.fc41 100% | 111.0 MiB/s | 1.2 MiB | 00m00s [ 87/156] Installing diffutils-0:3.10-8 100% | 127.7 MiB/s | 2.2 MiB | 00m00s [ 88/156] Installing librtas-0:2.0.6-2. 100% | 48.8 MiB/s | 499.7 KiB | 00m00s >>> Running post-install scriptlet: librtas-0:2.0.6-2.fc41.ppc64le >>> Stop post-install scriptlet: librtas-0:2.0.6-2.fc41.ppc64le [ 89/156] Installing libgomp-0:14.2.1-1 100% | 136.0 MiB/s | 696.5 KiB | 00m00s [ 90/156] Installing libpkgconf-0:2.3.0 100% | 64.8 MiB/s | 199.1 KiB | 00m00s [ 91/156] Installing pkgconf-0:2.3.0-1. 100% | 79.1 MiB/s | 243.0 KiB | 00m00s [ 92/156] Installing keyutils-libs-0:1. 100% | 111.1 MiB/s | 227.5 KiB | 00m00s [ 93/156] Installing libverto-0:0.3.2-9 100% | 97.2 MiB/s | 199.0 KiB | 00m00s [ 94/156] Installing jansson-0:2.13.1-1 100% | 108.3 MiB/s | 221.7 KiB | 00m00s [ 95/156] Installing libffi-0:3.4.6-3.f 100% | 107.1 MiB/s | 219.4 KiB | 00m00s [ 96/156] Installing p11-kit-0:0.25.5-3 100% | 121.0 MiB/s | 3.1 MiB | 00m00s [ 97/156] Installing p11-kit-trust-0:0. 100% | 58.3 MiB/s | 657.0 KiB | 00m00s >>> Running post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.ppc64le >>> Stop post-install scriptlet: p11-kit-trust-0:0.25.5-3.fc41.ppc64le [ 98/156] Installing xxhash-libs-0:0.8. 100% | 104.2 MiB/s | 213.3 KiB | 00m00s [ 99/156] Installing libbrotli-0:1.1.0- 100% | 140.6 MiB/s | 1.3 MiB | 00m00s [100/156] Installing libnghttp2-0:1.63. 100% | 106.5 MiB/s | 327.2 KiB | 00m00s [101/156] Installing libtool-ltdl-0:2.4 100% | 72.7 MiB/s | 223.2 KiB | 00m00s [102/156] Installing rust-srpm-macros-0 100% | 5.4 MiB/s | 5.6 KiB | 00m00s [103/156] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [104/156] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [105/156] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [106/156] Installing package-notes-srpm 100% | 2.0 MiB/s | 2.0 KiB | 00m00s [107/156] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [108/156] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [109/156] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [110/156] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [111/156] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [112/156] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [113/156] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [114/156] Installing pkgconf-m4-0:2.3.0 100% | 14.5 MiB/s | 14.8 KiB | 00m00s [115/156] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [116/156] Installing coreutils-common-0 100% | 149.2 MiB/s | 11.2 MiB | 00m00s [117/156] Installing openssl-libs-1:3.2 100% | 162.0 MiB/s | 8.6 MiB | 00m00s [118/156] Installing coreutils-0:9.5-9. 100% | 208.6 MiB/s | 21.5 MiB | 00m00s >>> Running pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.n >>> Stop pre-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noar [119/156] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s >>> Running post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41. >>> Stop post-install scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41.noa [120/156] Installing krb5-libs-0:1.21.3 100% | 153.8 MiB/s | 3.8 MiB | 00m00s [121/156] Installing libarchive-0:3.7.4 100% | 132.9 MiB/s | 1.3 MiB | 00m00s [122/156] Installing libtirpc-0:1.3.5-0 100% | 98.8 MiB/s | 404.5 KiB | 00m00s [123/156] Installing gzip-0:1.13-2.fc41 100% | 90.9 MiB/s | 558.4 KiB | 00m00s [124/156] Installing authselect-libs-0: 100% | 71.1 MiB/s | 946.7 KiB | 00m00s [125/156] Installing cracklib-0:2.9.11- 100% | 83.9 MiB/s | 945.6 KiB | 00m00s [126/156] Installing libpwquality-0:1.4 100% | 92.2 MiB/s | 1.1 MiB | 00m00s [127/156] Installing libnsl2-0:2.0.1-2. 100% | 72.6 MiB/s | 222.9 KiB | 00m00s [128/156] Installing pam-0:1.6.1-6.fc42 100% | 172.2 MiB/s | 11.0 MiB | 00m00s [129/156] Installing libssh-0:0.11.1-1. 100% | 126.9 MiB/s | 779.8 KiB | 00m00s [130/156] Installing rpm-sequoia-0:1.7. 100% | 150.8 MiB/s | 2.9 MiB | 00m00s [131/156] Installing rpm-libs-0:4.19.93 100% | 144.5 MiB/s | 1.2 MiB | 00m00s [132/156] Installing rpm-build-libs-0:4 100% | 127.4 MiB/s | 391.5 KiB | 00m00s [133/156] Installing libevent-0:2.1.12- 100% | 158.5 MiB/s | 1.6 MiB | 00m00s [134/156] Installing openldap-0:2.6.8-5 100% | 140.1 MiB/s | 1.1 MiB | 00m00s [135/156] Installing libcurl-0:8.9.1-3. 100% | 136.2 MiB/s | 1.1 MiB | 00m00s [136/156] Installing elfutils-debuginfo 100% | 97.3 MiB/s | 398.5 KiB | 00m00s [137/156] Installing binutils-0:2.43.1- 100% | 173.1 MiB/s | 33.1 MiB | 00m00s >>> Running post-install scriptlet: binutils-0:2.43.1-1.fc42.ppc64le >>> Stop post-install scriptlet: binutils-0:2.43.1-1.fc42.ppc64le [138/156] Installing elfutils-0:0.191-8 100% | 195.1 MiB/s | 5.3 MiB | 00m00s [139/156] Installing gdb-minimal-0:15.1 100% | 164.7 MiB/s | 14.2 MiB | 00m00s [140/156] Installing debugedit-0:5.0-17 100% | 122.5 MiB/s | 501.8 KiB | 00m00s [141/156] Installing curl-0:8.9.1-3.fc4 100% | 53.2 MiB/s | 926.7 KiB | 00m00s >>> Running pre-install scriptlet: rpm-0:4.19.93-1.fc42.ppc64le >>> Stop pre-install scriptlet: rpm-0:4.19.93-1.fc42.ppc64le [142/156] Installing rpm-0:4.19.93-1.fc 100% | 81.7 MiB/s | 3.4 MiB | 00m00s [143/156] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [144/156] Installing lua-srpm-macros-0: 100% | 1.9 MiB/s | 1.9 KiB | 00m00s [145/156] Installing zig-srpm-macros-0: 100% | 1.6 MiB/s | 1.7 KiB | 00m00s [146/156] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [147/156] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s [148/156] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [149/156] Installing python-srpm-macros 100% | 25.5 MiB/s | 52.2 KiB | 00m00s [150/156] Installing redhat-rpm-config- 100% | 37.7 MiB/s | 192.9 KiB | 00m00s [151/156] Installing rpm-build-0:4.19.9 100% | 126.9 MiB/s | 1.4 MiB | 00m00s [152/156] Installing pyproject-srpm-mac 100% | 832.0 KiB/s | 2.5 KiB | 00m00s [153/156] Installing util-linux-0:2.40. 100% | 174.3 MiB/s | 17.3 MiB | 00m00s >>> Running post-install scriptlet: util-linux-0:2.40.2-8.fc42.ppc64le >>> Stop post-install scriptlet: util-linux-0:2.40.2-8.fc42.ppc64le [154/156] Installing authselect-0:1.5.0 100% | 61.3 MiB/s | 313.8 KiB | 00m00s [155/156] Installing which-0:2.21-42.fc 100% | 81.5 MiB/s | 250.2 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.execute() instead [156/156] Installing info-0:7.1-3.fc41. 100% | 332.1 KiB/s | 677.9 KiB | 00m02s >>> Running post-transaction scriptlet: filesystem-0:3.18-23.fc41.ppc64le >>> Stop post-transaction scriptlet: filesystem-0:3.18-23.fc41.ppc64le >>> Running post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.f >>> Stop post-transaction scriptlet: ca-certificates-0:2024.2.68_v8.0.302-3.fc41 >>> Running post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.ppc64le >>> Stop post-transaction scriptlet: authselect-libs-0:1.5.0-7.fc41.ppc64le >>> Running post-transaction scriptlet: rpm-0:4.19.93-1.fc42.ppc64le >>> Stop post-transaction scriptlet: rpm-0:4.19.93-1.fc42.ppc64le >>> Running trigger-install scriptlet: glibc-common-0:2.40-3.fc41.ppc64le >>> Stop trigger-install scriptlet: glibc-common-0:2.40-3.fc41.ppc64le >>> Running trigger-install scriptlet: info-0:7.1-3.fc41.ppc64le >>> Stop trigger-install scriptlet: info-0:7.1-3.fc41.ppc64le Complete! Warning: skipped PGP checks for 153 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.ppc64le alternatives-1.30-1.fc41.ppc64le ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.ppc64le authselect-1.5.0-7.fc41.ppc64le authselect-libs-1.5.0-7.fc41.ppc64le basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.ppc64le binutils-2.43.1-1.fc42.ppc64le build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.ppc64le bzip2-libs-1.0.8-19.fc41.ppc64le ca-certificates-2024.2.68_v8.0.302-3.fc41.noarch coreutils-9.5-9.fc42.ppc64le coreutils-common-9.5-9.fc42.ppc64le cpio-2.15-2.fc41.ppc64le cracklib-2.9.11-6.fc41.ppc64le crypto-policies-20240828-1.git5f66e81.fc42.noarch curl-8.9.1-3.fc42.ppc64le cyrus-sasl-lib-2.1.28-27.fc41.ppc64le debugedit-5.0-17.fc41.ppc64le diffutils-3.10-8.fc41.ppc64le dwz-0.15-7.fc41.ppc64le ed-1.20.2-2.fc41.ppc64le efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.ppc64le elfutils-debuginfod-client-0.191-8.fc41.ppc64le elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.ppc64le elfutils-libs-0.191-8.fc41.ppc64le fedora-gpg-keys-42-0.1.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.1.noarch fedora-repos-rawhide-42-0.1.noarch file-5.45-7.fc41.ppc64le file-libs-5.45-7.fc41.ppc64le filesystem-3.18-23.fc41.ppc64le findutils-4.10.0-4.fc41.ppc64le fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.3.2-1.fc41.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.ppc64le gdb-minimal-15.1-1.fc42.ppc64le gdbm-1.23-7.fc41.ppc64le gdbm-libs-1.23-7.fc41.ppc64le ghc-srpm-macros-1.9.1-2.fc41.noarch glibc-2.40-3.fc41.ppc64le glibc-common-2.40-3.fc41.ppc64le glibc-gconv-extra-2.40-3.fc41.ppc64le glibc-minimal-langpack-2.40-3.fc41.ppc64le gmp-6.3.0-2.fc41.ppc64le gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.ppc64le gzip-1.13-2.fc41.ppc64le info-7.1-3.fc41.ppc64le jansson-2.13.1-10.fc41.ppc64le kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.ppc64le krb5-libs-1.21.3-2.fc41.ppc64le libacl-2.3.2-2.fc41.ppc64le libarchive-3.7.4-3.fc41.ppc64le libattr-2.5.2-4.fc41.ppc64le libblkid-2.40.2-8.fc42.ppc64le libbrotli-1.1.0-5.fc41.ppc64le libcap-2.70-4.fc41.ppc64le libcap-ng-0.8.5-3.fc41.ppc64le libcom_err-1.47.1-3.fc41.ppc64le libcurl-8.9.1-3.fc42.ppc64le libeconf-0.6.2-3.fc41.ppc64le libevent-2.1.12-14.fc41.ppc64le libfdisk-2.40.2-8.fc42.ppc64le libffi-3.4.6-3.fc42.ppc64le libgcc-14.2.1-1.fc42.ppc64le libgomp-14.2.1-1.fc42.ppc64le libidn2-2.3.7-2.fc41.ppc64le libmount-2.40.2-8.fc42.ppc64le libnghttp2-1.63.0-1.fc42.ppc64le libnsl2-2.0.1-2.fc41.ppc64le libpkgconf-2.3.0-1.fc42.ppc64le libpsl-0.21.5-4.fc41.ppc64le libpwquality-1.4.5-11.fc41.ppc64le librtas-2.0.6-2.fc41.ppc64le libselinux-3.7-5.fc41.ppc64le libsemanage-3.7-2.fc41.ppc64le libsepol-3.7-2.fc41.ppc64le libsmartcols-2.40.2-8.fc42.ppc64le libssh-0.11.1-1.fc42.ppc64le libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-1.fc42.ppc64le libtasn1-4.19.0-9.fc41.ppc64le libtirpc-1.3.5-0.fc41.ppc64le libtool-ltdl-2.4.7-12.fc41.ppc64le libunistring-1.1-8.fc41.ppc64le libuuid-2.40.2-8.fc42.ppc64le libverto-0.3.2-9.fc41.ppc64le libxcrypt-4.4.36-7.fc41.ppc64le libxml2-2.12.8-2.fc41.ppc64le libzstd-1.5.6-2.fc41.ppc64le lua-libs-5.4.6-6.fc41.ppc64le lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.ppc64le mpfr-4.2.1-5.fc41.ppc64le ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.ppc64le ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.ppc64le openssl-libs-3.2.2-5.fc41.ppc64le p11-kit-0.25.5-3.fc41.ppc64le p11-kit-trust-0.25.5-3.fc41.ppc64le package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.ppc64le pam-libs-1.6.1-6.fc42.ppc64le patch-2.7.6-25.fc41.ppc64le pcre2-10.44-1.fc41.1.ppc64le pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.ppc64le pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.ppc64le popt-1.19-7.fc41.ppc64le publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.14.0-1.fc41.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.14-3.fc41.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.ppc64le redhat-rpm-config-294-1.fc42.noarch rpm-4.19.93-1.fc42.ppc64le rpm-build-4.19.93-1.fc42.ppc64le rpm-build-libs-4.19.93-1.fc42.ppc64le rpm-libs-4.19.93-1.fc42.ppc64le rpm-sequoia-1.7.0-2.fc41.ppc64le rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.ppc64le setup-2.15.0-5.fc41.noarch shadow-utils-4.15.1-9.fc41.ppc64le sqlite-libs-3.46.1-1.fc41.ppc64le systemd-libs-256.5-1.fc42.ppc64le tar-1.35-4.fc41.ppc64le unzip-6.0-64.fc41.ppc64le util-linux-2.40.2-8.fc42.ppc64le util-linux-core-2.40.2-8.fc42.ppc64le which-2.21-42.fc41.ppc64le xxhash-libs-0.8.2-3.fc41.ppc64le xz-5.6.2-2.fc41.ppc64le xz-libs-5.6.2-2.fc41.ppc64le zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.ppc64le zlib-ng-compat-2.1.7-2.fc41.ppc64le zstd-1.5.6-2.fc41.ppc64le Start: buildsrpm Start: rpmbuild -bs Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1725408000 Wrote: /builddir/build/SRPMS/R-rtracklayer-1.62.0-3.fc42.src.rpm Finish: rpmbuild -bs cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-41-ppc64le-1725496048.608952/root/var/log’: No such file or directory INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-ppc64le-1725496048.608952/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-zf9ys6ff/R-rtracklayer/R-rtracklayer.spec) Config(child) 0 minutes 54 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/R-rtracklayer-1.62.0-3.fc42.src.rpm) Config(fedora-41-ppc64le) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-ppc64le-bootstrap-1725496048.608952/root. INFO: reusing tmpfs at /var/lib/mock/fedora-41-ppc64le-bootstrap-1725496048.608952/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-41-ppc64le-1725496048.608952/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.92-6.fc41.ppc64le rpm-sequoia-1.7.0-2.fc41.ppc64le dnf5-5.2.5.0-2.fc41.ppc64le dnf5-plugins-5.2.5.0-2.fc41.ppc64le Finish: chroot init Start: build phase for R-rtracklayer-1.62.0-3.fc42.src.rpm Start: build setup for R-rtracklayer-1.62.0-3.fc42.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1725408000 Wrote: /builddir/build/SRPMS/R-rtracklayer-1.62.0-3.fc42.src.rpm Updating and loading repositories: Additional repo http_kojipkgs_fedorapr 100% | 51.1 KiB/s | 3.8 KiB | 00m00s Copr repository 100% | 41.5 KiB/s | 1.5 KiB | 00m00s fedora 100% | 135.5 KiB/s | 5.1 KiB | 00m00s updates 100% | 176.2 KiB/s | 4.9 KiB | 00m00s Additional repo http_kojipkgs_fedorapr 100% | 29.1 MiB/s | 13.9 MiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: R-BiocGenerics noarch 0.42.0-9.fc41 copr_base 1.1 MiB R-BiocIO noarch 1.6.0-9.fc41 copr_base 876.3 KiB R-Biostrings-devel ppc64le 2.64.1-9.fc41 copr_base 16.4 KiB R-GenomeInfoDb noarch 1.32.3-9.fc41 copr_base 4.9 MiB R-GenomicAlignments ppc64le 1.32.1-9.fc41 copr_base 3.2 MiB R-GenomicRanges ppc64le 1.48.0-9.fc41 copr_base 3.7 MiB R-IRanges-devel ppc64le 2.30.1-9.fc41 copr_base 10.2 KiB R-RCurl ppc64le 1.98.1.8-9.fc42 copr_base 2.2 MiB R-Rsamtools ppc64le 2.18.0-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.7 MiB R-S4Vectors-devel ppc64le 0.40.2-2.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 32.5 KiB R-XML ppc64le 3.99.0.16.1-3.fc41 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.5 MiB R-XVector-devel ppc64le 0.42.0-2.fc41 copr_base 17.3 KiB R-core ppc64le 4.4.1-5.fc41 copr_base 107.6 MiB R-devel ppc64le 4.4.1-5.fc41 copr_base 0.0 B R-restfulr ppc64le 0.0.15-9.fc41 copr_base 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 921.0 KiB Transaction Summary: Installing: 721 packages Total size of inbound packages is 555 MiB. Need to download 555 MiB. After this operation 1 GiB will be used (install 1 GiB, remove 0 B). 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100% | 1.0 MiB/s | 17.0 KiB | 00m00s [705/721] perl-Devel-Caller-0:2.07-7.fc 100% | 979.1 KiB/s | 19.6 KiB | 00m00s [706/721] perl-PadWalker-0:2.5-15.fc41. 100% | 1.5 MiB/s | 27.7 KiB | 00m00s [707/721] perltidy-0:20240903-1.fc42.no 100% | 17.5 MiB/s | 789.7 KiB | 00m00s [708/721] perl-Date-ISO8601-0:0.005-21. 100% | 1.1 MiB/s | 19.2 KiB | 00m00s [709/721] perl-DateTime-TimeZone-System 100% | 1.3 MiB/s | 22.5 KiB | 00m00s [710/721] perl-Params-Classify-0:0.015- 100% | 1.8 MiB/s | 32.0 KiB | 00m00s [711/721] perl-File-ShareDir-0:1.118-12 100% | 1.7 MiB/s | 29.8 KiB | 00m00s [712/721] perl-Hash-Util-FieldHash-0:1. 100% | 2.3 MiB/s | 39.9 KiB | 00m00s [713/721] perl-Variable-Magic-0:0.64-3. 100% | 3.3 MiB/s | 56.7 KiB | 00m00s [714/721] perl-Pod-Html-0:1.35-511.fc41 100% | 1.7 MiB/s | 29.4 KiB | 00m00s [715/721] perl-English-0:1.11-511.fc41. 100% | 753.0 KiB/s | 13.6 KiB | 00m00s [716/721] perl-Package-Stash-0:0.40-8.f 100% | 1.9 MiB/s | 32.6 KiB | 00m00s [717/721] 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nss-0:3.103.0-1.fc41.ppc64le >>> Stop post-install scriptlet: nss-0:3.103.0-1.fc41.ppc64le [ 62/723] Installing urw-base35-bookman 100% | 71.8 MiB/s | 1.4 MiB | 00m00s >>> Running post-install scriptlet: urw-base35-bookman-fonts-0:20200910-23.fc41. >>> Stop post-install scriptlet: urw-base35-bookman-fonts-0:20200910-23.fc41.noa [ 63/723] Installing urw-base35-c059-fo 100% | 99.7 MiB/s | 1.4 MiB | 00m00s >>> Running post-install scriptlet: urw-base35-c059-fonts-0:20200910-23.fc41.noa >>> Stop post-install scriptlet: urw-base35-c059-fonts-0:20200910-23.fc41.noarch [ 64/723] Installing urw-base35-d050000 100% | 11.9 MiB/s | 85.4 KiB | 00m00s >>> Running post-install scriptlet: urw-base35-d050000l-fonts-0:20200910-23.fc41 >>> Stop post-install scriptlet: urw-base35-d050000l-fonts-0:20200910-23.fc41.no [ 65/723] Installing urw-base35-gothic- 100% | 89.4 MiB/s | 1.2 MiB | 00m00s >>> Running post-install scriptlet: urw-base35-gothic-fonts-0:20200910-23.fc41.n >>> Stop post-install scriptlet: 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100% | 131.2 MiB/s | 268.7 KiB | 00m00s [251/723] Installing texlive-pdftexcmds 100% | 138.5 MiB/s | 425.6 KiB | 00m00s [252/723] Installing texlive-kvoptions- 100% | 179.6 MiB/s | 551.6 KiB | 00m00s [253/723] Installing texlive-ltxcmds-11 100% | 138.5 MiB/s | 425.5 KiB | 00m00s [254/723] Installing texlive-url-11:svn 100% | 21.6 MiB/s | 22.1 KiB | 00m00s [255/723] Installing texlive-atbegshi-1 100% | 108.7 MiB/s | 445.1 KiB | 00m00s [256/723] Installing texlive-amsfonts-1 100% | 94.4 MiB/s | 6.0 MiB | 00m00s [257/723] Installing texlive-booktabs-1 100% | 18.6 MiB/s | 19.0 KiB | 00m00s [258/723] Installing texlive-infwarerr- 100% | 150.2 MiB/s | 307.5 KiB | 00m00s [259/723] Installing texlive-atveryend- 100% | 80.3 MiB/s | 411.2 KiB | 00m00s [260/723] Installing texlive-babel-11:s 100% | 23.9 MiB/s | 2.2 MiB | 00m00s [261/723] Installing texlive-etex-pkg-1 100% | 18.6 MiB/s | 19.0 KiB | 00m00s [262/723] Installing texlive-etoolbox-1 100% | 66.1 MiB/s | 67.7 KiB | 00m00s [263/723] Installing texlive-auxhook-11 100% | 148.0 MiB/s | 303.2 KiB | 00m00s [264/723] Installing texlive-etexcmds-1 100% | 157.4 MiB/s | 322.3 KiB | 00m00s [265/723] Installing texlive-latex-font 100% | 30.3 MiB/s | 124.2 KiB | 00m00s [266/723] Installing texlive-pdfescape- 100% | 122.8 MiB/s | 377.2 KiB | 00m00s [267/723] Installing texlive-fp-11:svn4 100% | 62.4 MiB/s | 127.9 KiB | 00m00s [268/723] Installing texlive-hologo-11: 100% | 162.6 MiB/s | 666.1 KiB | 00m00s [269/723] Installing texlive-ragged2e-1 100% | 179.0 MiB/s | 733.3 KiB | 00m00s [270/723] Installing texlive-setspace-1 100% | 21.9 MiB/s | 22.4 KiB | 00m00s [271/723] Installing texlive-bigintcalc 100% | 168.2 MiB/s | 516.8 KiB | 00m00s [272/723] Installing texlive-graphics-c 100% | 3.8 MiB/s | 3.9 KiB | 00m00s [273/723] Installing texlive-graphics-1 100% | 41.9 MiB/s | 128.7 KiB | 00m00s [274/723] Installing texlive-tools-11:s 100% | 80.4 MiB/s | 411.7 KiB | 00m00s [275/723] Installing texlive-xkeyval-11 100% | 35.0 MiB/s | 71.6 KiB | 00m00s [276/723] Installing texlive-geometry-1 100% | 49.1 MiB/s | 50.2 KiB | 00m00s [277/723] Installing texlive-caption-11 100% | 148.5 MiB/s | 912.6 KiB | 00m00s [278/723] Installing texlive-colortbl-1 100% | 21.3 MiB/s | 21.8 KiB | 00m00s [279/723] Installing texlive-hycolor-11 100% | 134.5 MiB/s | 413.1 KiB | 00m00s [280/723] Installing texlive-intcalc-11 100% | 153.9 MiB/s | 472.8 KiB | 00m00s [281/723] Installing texlive-kvsetkeys- 100% | 139.6 MiB/s | 428.8 KiB | 00m00s [282/723] Installing texlive-l3backend- 100% | 184.5 MiB/s | 1.1 MiB | 00m00s [283/723] Installing texlive-letltxmacr 100% | 152.7 MiB/s | 312.6 KiB | 00m00s [284/723] Installing texlive-natbib-11: 100% | 65.5 MiB/s | 134.2 KiB | 00m00s [285/723] Installing texlive-uniquecoun 100% | 153.1 MiB/s | 313.5 KiB | 00m00s [286/723] Installing texlive-hypdoc-11: 100% | 175.5 MiB/s | 359.5 KiB | 00m00s [287/723] Installing texlive-footmisc-1 100% | 16.0 MiB/s | 65.6 KiB | 00m00s [288/723] Installing texlive-lm-11:svn6 100% | 166.8 MiB/s | 39.5 MiB | 00m00s [289/723] Installing texlive-multido-11 100% | 19.2 MiB/s | 19.6 KiB | 00m00s [290/723] Installing texlive-rerunfilec 100% | 177.4 MiB/s | 363.3 KiB | 00m00s [291/723] Installing texlive-subfig-11: 100% | 36.6 MiB/s | 37.5 KiB | 00m00s [292/723] Installing texlive-carlisle-1 100% | 16.0 MiB/s | 32.8 KiB | 00m00s [293/723] Installing texlive-translator 100% | 46.1 MiB/s | 519.8 KiB | 00m00s [294/723] Installing texlive-sauerj-11: 100% | 27.9 MiB/s | 28.6 KiB | 00m00s [295/723] Installing texlive-csquotes-1 100% | 110.6 MiB/s | 113.3 KiB | 00m00s [296/723] Installing texlive-bitset-11: 100% | 216.0 MiB/s | 663.5 KiB | 00m00s [297/723] Installing texlive-catchfile- 100% | 156.3 MiB/s | 320.0 KiB | 00m00s [298/723] Installing texlive-ifplatform 100% | 13.1 MiB/s | 13.5 KiB | 00m00s [299/723] Installing texlive-memoir-11: 100% | 118.1 MiB/s | 483.6 KiB | 00m00s [300/723] Installing texlive-babelbib-1 100% | 128.1 MiB/s | 787.2 KiB | 00m00s [301/723] Installing texlive-euenc-11:s 100% | 20.6 MiB/s | 42.2 KiB | 00m00s [302/723] Installing texlive-euler-11:s 100% | 20.9 MiB/s | 21.4 KiB | 00m00s [303/723] Installing texlive-everyshi-1 100% | 77.6 MiB/s | 158.9 KiB | 00m00s [304/723] Installing texlive-fancybox-1 100% | 40.5 MiB/s | 41.5 KiB | 00m00s [305/723] Installing texlive-float-11:s 100% | 15.8 MiB/s | 16.2 KiB | 00m00s [306/723] Installing texlive-grffile-11 100% | 123.9 MiB/s | 380.7 KiB | 00m00s [307/723] Installing texlive-index-11:s 100% | 60.7 MiB/s | 62.1 KiB | 00m00s [308/723] Installing texlive-pdflscape- 100% | 168.3 MiB/s | 344.8 KiB | 00m00s [309/723] Installing texlive-ucharcat-1 100% | 10.7 MiB/s | 10.9 KiB | 00m00s [310/723] Installing texlive-underscore 100% | 19.6 MiB/s | 20.1 KiB | 00m00s [311/723] Installing texlive-bookmark-1 100% | 139.7 MiB/s | 572.2 KiB | 00m00s [312/723] Installing texlive-fancyhdr-1 100% | 31.9 MiB/s | 32.7 KiB | 00m00s [313/723] Installing texlive-firstaid-1 100% | 145.9 MiB/s | 298.8 KiB | 00m00s [314/723] Installing texlive-gettitlest 100% | 166.1 MiB/s | 340.1 KiB | 00m00s [315/723] Installing texlive-grfext-11: 100% | 80.3 MiB/s | 329.1 KiB | 00m00s [316/723] Installing texlive-kvdefineke 100% | 154.1 MiB/s | 315.5 KiB | 00m00s [317/723] Installing texlive-latexconfi 100% | 9.6 MiB/s | 9.8 KiB | 00m00s [318/723] Installing texlive-refcount-1 100% | 170.5 MiB/s | 349.2 KiB | 00m00s [319/723] Installing texlive-stringenc- 100% | 131.8 MiB/s | 1.1 MiB | 00m00s [320/723] Installing texlive-glyphlist- 100% | 89.0 MiB/s | 91.1 KiB | 00m00s [321/723] Installing texlive-lua-alt-ge 100% | 4.2 MiB/s | 4.3 KiB | 00m00s [322/723] Installing texlive-modes-11:s 100% | 95.7 MiB/s | 391.9 KiB | 00m00s [323/723] Installing texlive-palatino-1 100% | 53.4 MiB/s | 1.1 MiB | 00m00s [324/723] Installing texlive-zapfding-1 100% | 26.9 MiB/s | 82.7 KiB | 00m00s [325/723] Installing texlive-zref-11:sv 100% | 133.8 MiB/s | 822.0 KiB | 00m00s [326/723] Installing texlive-marvosym-1 100% | 61.3 MiB/s | 188.3 KiB | 00m00s [327/723] Installing texlive-paralist-1 100% | 23.6 MiB/s | 24.1 KiB | 00m00s [328/723] Installing texlive-placeins-1 100% | 5.2 MiB/s | 5.4 KiB | 00m00s [329/723] Installing texlive-auto-pst-p 100% | 15.2 MiB/s | 15.6 KiB | 00m00s [330/723] Installing texlive-breakurl-1 100% | 17.5 MiB/s | 17.9 KiB | 00m00s [331/723] Installing texlive-fancyref-1 100% | 27.9 MiB/s | 28.6 KiB | 00m00s [332/723] Installing texlive-mathtools- 100% | 128.7 MiB/s | 131.8 KiB | 00m00s [333/723] Installing texlive-ltabptch-1 100% | 21.1 MiB/s | 21.6 KiB | 00m00s [334/723] Installing texlive-crop-11:sv 100% | 26.8 MiB/s | 27.4 KiB | 00m00s [335/723] Installing texlive-microtype- 100% | 113.7 MiB/s | 465.6 KiB | 00m00s [336/723] Installing texlive-pdfmanagem 100% | 236.0 MiB/s | 11.6 MiB | 00m00s [337/723] Installing texlive-psfrag-11: 100% | 12.7 MiB/s | 13.0 KiB | 00m00s [338/723] Installing texlive-logreq-11: 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [339/723] Installing texlive-dvips-11:s 100% | 111.0 MiB/s | 1.9 MiB | 00m00s [340/723] Installing texlive-hopatch-11 100% | 169.5 MiB/s | 347.2 KiB | 00m00s [341/723] Installing texlive-anysize-11 100% | 4.1 MiB/s | 4.1 KiB | 00m00s [342/723] Installing texlive-cite-11:sv 100% | 61.7 MiB/s | 63.2 KiB | 00m00s [343/723] Installing texlive-cmap-11:sv 100% | 18.9 MiB/s | 38.8 KiB | 00m00s [344/723] Installing texlive-everysel-1 100% | 149.5 MiB/s | 459.4 KiB | 00m00s [345/723] Installing texlive-footnotehy 100% | 30.5 MiB/s | 31.3 KiB | 00m00s [346/723] Installing texlive-latexbug-1 100% | 69.3 MiB/s | 283.8 KiB | 00m00s [347/723] Installing texlive-lwarp-11:s 100% | 86.3 MiB/s | 4.9 MiB | 00m00s [348/723] Installing texlive-mdwtools-1 100% | 55.8 MiB/s | 114.2 KiB | 00m00s [349/723] Installing texlive-newfloat-1 100% | 78.0 MiB/s | 159.7 KiB | 00m00s [350/723] Installing texlive-ntgclass-1 100% | 139.3 MiB/s | 285.2 KiB | 00m00s [351/723] Installing texlive-parskip-11 100% | 16.3 MiB/s | 16.7 KiB | 00m00s [352/723] Installing texlive-pdfcolfoot 100% | 109.7 MiB/s | 337.1 KiB | 00m00s [353/723] Installing texlive-rcs-11:svn 100% | 46.6 MiB/s | 47.7 KiB | 00m00s [354/723] Installing texlive-sansmath-1 100% | 9.1 MiB/s | 9.3 KiB | 00m00s [355/723] Installing texlive-section-11 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [356/723] Installing texlive-sepnum-11: 100% | 15.4 MiB/s | 15.8 KiB | 00m00s [357/723] Installing texlive-textcase-1 100% | 11.7 MiB/s | 12.0 KiB | 00m00s [358/723] Installing texlive-babel-engl 100% | 45.4 MiB/s | 46.5 KiB | 00m00s [359/723] Installing texlive-fix2col-11 100% | 17.0 MiB/s | 17.4 KiB | 00m00s [360/723] Installing texlive-latex-lab- 100% | 210.1 MiB/s | 2.3 MiB | 00m00s [361/723] Installing texlive-mfnfss-11: 100% | 24.2 MiB/s | 24.7 KiB | 00m00s [362/723] Installing texlive-mptopdf-11 100% | 50.0 MiB/s | 153.5 KiB | 00m00s [363/723] Installing texlive-pagesel-11 100% | 173.9 MiB/s | 356.1 KiB | 00m00s [364/723] Installing texlive-pslatex-11 100% | 14.3 MiB/s | 29.2 KiB | 00m00s [365/723] Installing texlive-pspicture- 100% | 14.4 MiB/s | 14.7 KiB | 00m00s [366/723] Installing texlive-bibtex-11: 100% | 130.4 MiB/s | 934.8 KiB | 00m00s [367/723] Installing texlive-colorprofi 100% | 44.6 MiB/s | 274.1 KiB | 00m00s [368/723] Installing texlive-ec-11:svn2 100% | 31.7 MiB/s | 2.7 MiB | 00m00s [369/723] Installing texlive-enctex-11: 100% | 45.7 MiB/s | 187.3 KiB | 00m00s [370/723] Installing texlive-hyphenex-1 100% | 25.5 MiB/s | 26.1 KiB | 00m00s [371/723] Installing texlive-knuth-loca 100% | 27.6 MiB/s | 113.1 KiB | 00m00s [372/723] Installing texlive-luahbtex-1 100% | 163.7 MiB/s | 7.4 MiB | 00m00s [373/723] Installing texlive-makeindex- 100% | 106.1 MiB/s | 651.8 KiB | 00m00s [374/723] Installing texlive-mflogo-11: 100% | 13.3 MiB/s | 13.6 KiB | 00m00s [375/723] Installing texlive-mfware-11: 100% | 146.1 MiB/s | 1.2 MiB | 00m00s [376/723] Installing texlive-tex-11:svn 100% | 115.4 MiB/s | 590.6 KiB | 00m00s [377/723] Installing texlive-texlive-en 100% | 152.2 MiB/s | 5.9 MiB | 00m00s [378/723] Installing texlive-texlive-ms 100% | 175.8 MiB/s | 1.4 MiB | 00m00s [379/723] Installing texlive-pdfcolmk-1 100% | 20.2 MiB/s | 20.7 KiB | 00m00s [380/723] Installing texlive-xcolor-11: 100% | 78.8 MiB/s | 80.7 KiB | 00m00s [381/723] Installing texlive-eso-pic-11 100% | 27.9 MiB/s | 28.6 KiB | 00m00s [382/723] Installing texlive-lm-math-11 100% | 119.9 MiB/s | 736.9 KiB | 00m00s [383/723] Installing texlive-avantgar-1 100% | 69.0 MiB/s | 1.2 MiB | 00m00s [384/723] Installing texlive-bookman-11 100% | 61.7 MiB/s | 1.2 MiB | 00m00s [385/723] Installing texlive-charter-11 100% | 57.9 MiB/s | 415.0 KiB | 00m00s [386/723] Installing texlive-courier-11 100% | 65.4 MiB/s | 937.1 KiB | 00m00s [387/723] Installing texlive-helvetic-1 100% | 67.7 MiB/s | 1.8 MiB | 00m00s [388/723] Installing texlive-symbol-11: 100% | 26.7 MiB/s | 82.0 KiB | 00m00s [389/723] Installing texlive-times-11:s 100% | 35.7 MiB/s | 1.0 MiB | 00m00s [390/723] Installing texlive-utopia-11: 100% | 76.9 MiB/s | 551.4 KiB | 00m00s [391/723] Installing texlive-luabidi-11 100% | 26.1 MiB/s | 26.8 KiB | 00m00s [392/723] Installing texlive-makecmds-1 100% | 11.6 MiB/s | 11.9 KiB | 00m00s [393/723] Installing texlive-dehyph-11: 100% | 117.8 MiB/s | 241.2 KiB | 00m00s [394/723] Installing texlive-parallel-1 100% | 22.8 MiB/s | 23.3 KiB | 00m00s [395/723] Installing texlive-pdfcol-11: 100% | 169.3 MiB/s | 346.8 KiB | 00m00s [396/723] Installing texlive-fpl-11:svn 100% | 127.2 MiB/s | 651.2 KiB | 00m00s [397/723] Installing texlive-mathpazo-1 100% | 28.5 MiB/s | 116.7 KiB | 00m00s [398/723] Installing texlive-psnfss-11: 100% | 13.0 MiB/s | 119.5 KiB | 00m00s [399/723] Installing texlive-ctablestac 100% | 20.4 MiB/s | 20.9 KiB | 00m00s [400/723] Installing texlive-luatexbase 100% | 14.7 MiB/s | 15.1 KiB | 00m00s [401/723] Installing texlive-lua-uni-al 100% | 64.1 MiB/s | 131.3 KiB | 00m00s [402/723] Installing texlive-lualibs-11 100% | 107.6 MiB/s | 771.6 KiB | 00m00s [403/723] Installing texlive-luaotfload 100% | 186.8 MiB/s | 8.2 MiB | 00m00s [404/723] Installing texlive-beton-11:s 100% | 12.2 MiB/s | 12.5 KiB | 00m00s [405/723] Installing texlive-finstrut-1 100% | 25.7 MiB/s | 26.4 KiB | 00m00s [406/723] Installing texlive-lineno-11: 100% | 116.6 MiB/s | 238.8 KiB | 00m00s [407/723] Installing texlive-alphalph-1 100% | 184.1 MiB/s | 377.1 KiB | 00m00s [408/723] Installing texlive-enumitem-1 100% | 58.7 MiB/s | 60.1 KiB | 00m00s [409/723] Installing texlive-marginnote 100% | 22.8 MiB/s | 23.3 KiB | 00m00s [410/723] Installing texlive-mparhack-1 100% | 20.6 MiB/s | 21.1 KiB | 00m00s [411/723] Installing texlive-picture-11 100% | 158.6 MiB/s | 324.8 KiB | 00m00s [412/723] Installing texlive-rsfs-11:sv 100% | 33.3 MiB/s | 102.2 KiB | 00m00s [413/723] Installing texlive-hobsub-11: 100% | 40.0 MiB/s | 81.9 KiB | 00m00s [414/723] Installing texlive-hyperref-1 100% | 125.2 MiB/s | 769.4 KiB | 00m00s [415/723] Installing texlive-attachfile 100% | 120.8 MiB/s | 494.8 KiB | 00m00s [416/723] Installing texlive-attachfile 100% | 32.4 MiB/s | 33.2 KiB | 00m00s [417/723] Installing texlive-kastrup-11 100% | 4.1 MiB/s | 4.2 KiB | 00m00s [418/723] Installing texlive-transparen 100% | 148.3 MiB/s | 303.7 KiB | 00m00s [419/723] Installing texlive-ctable-11: 100% | 20.9 MiB/s | 21.4 KiB | 00m00s [420/723] Installing texlive-changepage 100% | 27.6 MiB/s | 28.2 KiB | 00m00s [421/723] Installing texlive-titlesec-1 100% | 96.6 MiB/s | 98.9 KiB | 00m00s [422/723] Installing texlive-ifmtarg-11 100% | 9.7 MiB/s | 9.9 KiB | 00m00s [423/723] Installing texlive-xetexconfi 100% | 0.0 B/s | 776.0 B | 00m00s [424/723] Installing texlive-varwidth-1 100% | 19.8 MiB/s | 20.3 KiB | 00m00s [425/723] Installing texlive-fileconten 100% | 12.7 MiB/s | 13.0 KiB | 00m00s [426/723] Installing texlive-pst-math-1 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [427/723] Installing texlive-notoccite- 100% | 2.9 MiB/s | 3.0 KiB | 00m00s [428/723] Installing texlive-xstring-11 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [429/723] Installing perl-LWP-Protocol- 100% | 30.4 MiB/s | 31.1 KiB | 00m00s [430/723] Installing perl-XML-SAX-0:1.0 100% | 1.2 MiB/s | 126.0 KiB | 00m00s >>> Running post-install scriptlet: perl-XML-SAX-0:1.02-17.fc41.noarch >>> Stop post-install scriptlet: perl-XML-SAX-0:1.02-17.fc41.noarch [431/723] Installing perl-XML-LibXML-1: 100% | 6.0 MiB/s | 1.1 MiB | 00m00s >>> Running trigger-install scriptlet: perl-XML-LibXML-1:2.0210-3.fc41.ppc64le >>> Stop trigger-install scriptlet: perl-XML-LibXML-1:2.0210-3.fc41.ppc64le [432/723] Installing perl-XML-LibXML-Si 100% | 25.5 MiB/s | 52.3 KiB | 00m00s [433/723] Installing perl-Class-Accesso 100% | 41.9 MiB/s | 42.9 KiB | 00m00s [434/723] Installing perl-File-Slurper- 100% | 29.3 MiB/s | 30.0 KiB | 00m00s [435/723] Installing perl-IO-String-0:1 100% | 17.4 MiB/s | 17.8 KiB | 00m00s [436/723] Installing perl-IPC-Run3-0:0. 100% | 30.9 MiB/s | 63.3 KiB | 00m00s [437/723] 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Warning: skipped PGP checks for 721 packages from repositories: copr_base, http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch Finish: build setup for R-rtracklayer-1.62.0-3.fc42.src.rpm Start: rpmbuild R-rtracklayer-1.62.0-3.fc42.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1725408000 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.s9xRV2 + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + test -d /builddir/build/BUILD/R-rtracklayer-1.62.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-rtracklayer-1.62.0-build + /usr/bin/rm -rf /builddir/build/BUILD/R-rtracklayer-1.62.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-rtracklayer-1.62.0-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-rtracklayer-1.62.0-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.IvxhFB + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + rm -rf rtracklayer + /usr/bin/mkdir -p rtracklayer + cd rtracklayer + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/rtracklayer_1.62.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i -e 's|zlibbioc,||' rtracklayer/DESCRIPTION + sed -i -e 's|import(zlibbioc)||' rtracklayer/NAMESPACE ~/build/BUILD/R-rtracklayer-1.62.0-build/rtracklayer/rtracklayer ~/build/BUILD/R-rtracklayer-1.62.0-build/rtracklayer Patch #0 (0001-fix-format-security.patch): + pushd rtracklayer + echo 'Patch #0 (0001-fix-format-security.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0 patching file src/handlers.c ~/build/BUILD/R-rtracklayer-1.62.0-build/rtracklayer + popd + cp /builddir/build/SOURCES/rtracklayer_jimkent_license.txt . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.36UOrZ + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.X4JWb2 + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + '[' /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-rtracklayer-1.62.0-build + mkdir /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + mkdir -p /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/lib64/R/library + /usr/bin/R CMD INSTALL rtracklayer -l /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/lib64/R/library * installing *source* package ‘rtracklayer’ ... ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for OPENSSL... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc (GCC) 14.2.1 20240801 (Red Hat 14.2.1-1)’ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c S4Vectors_stubs.c -o S4Vectors_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c IRanges_stubs.c -o IRanges_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c XVector_stubs.c -o XVector_stubs.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c R_init_rtracklayer.c -o R_init_rtracklayer.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c readGFF.c -o readGFF.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c bbiHelper.c -o bbiHelper.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c bigWig.c -o bigWig.o bigWig.c: In function ‘BWGFile_query’: bigWig.c:268:11: warning: ‘ans_nhits’ may be used uninitialized [-Wmaybe-uninitialized] 268 | INTEGER(ans_nhits)[i] = nqhits; | ^~~~~~~~~~~~~~~~~~ bigWig.c:231:58: note: ‘ans_nhits’ was declared here 231 | SEXP ans, ans_start, ans_width, ans_score, ans_ranges, ans_nhits; | ^~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c bigBedHelper.c -o bigBedHelper.o In file included from /usr/include/string.h:548, from ucsc/common.h:33, from bigBedHelper.h:5, from bigBedHelper.c:1: In function ‘strncpy’, inlined from ‘bbNamedFileChunkKey’ at bigBedHelper.c:148:3: /usr/include/bits/string_fortified.h:100:10: warning: ‘strncpy’ destination unchanged after copying no bytes [-Wstringop-truncation] 100 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c bigBed.c -o bigBed.o bigBed.c: In function ‘BBDFile_write’: bigBed.c:338:10: warning: variable ‘extraIndexListEndOffset’ set but not used [-Wunused-but-set-variable] 338 | bits64 extraIndexListEndOffset = 0; | ^~~~~~~~~~~~~~~~~~~~~~~ bigBed.c: In function ‘BBDFile_query’: bigBed.c:195:7: warning: ‘name’ may be used uninitialized [-Wmaybe-uninitialized] 195 | SET_STRING_ELT(name, i, mkChar(bed->name)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:74:54: note: ‘name’ was declared here 74 | SEXP ans, n_qhits, ranges, chromStart, chromWidth, name, score, | ^~~~ bigBed.c:198:7: warning: ‘score’ may be used uninitialized [-Wmaybe-uninitialized] 198 | INTEGER(score)[i] = bed->score; | ^~~~~~~~~~~~~~ bigBed.c:74:60: note: ‘score’ was declared here 74 | SEXP ans, n_qhits, ranges, chromStart, chromWidth, name, score, | ^~~~~ bigBed.c:205:7: warning: ‘thickStart’ may be used uninitialized [-Wmaybe-uninitialized] 205 | INTEGER(thickStart)[i] = bed->thickStart; | ^~~~~~~~~~~~~~~~~~~ bigBed.c:75:26: note: ‘thickStart’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~~~~ bigBed.c:204:7: warning: ‘thickWidth’ may be used uninitialized [-Wmaybe-uninitialized] 204 | INTEGER(thickWidth)[i] = bed->thickEnd - bed->thickStart + 1; | ^~~~~~~~~~~~~~~~~~~ bigBed.c:75:38: note: ‘thickWidth’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~~~~ bigBed.c:209:7: warning: ‘itemRgb’ may be used uninitialized [-Wmaybe-uninitialized] 209 | SET_STRING_ELT(itemRgb, i, mkChar(rgbBuf)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:75:50: note: ‘itemRgb’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~~ bigBed.c:218:7: warning: ‘blocks’ may be used uninitialized [-Wmaybe-uninitialized] 218 | SET_VECTOR_ELT(blocks, i, new_IRanges("IRanges", bstart, bwidth, R_NilValue)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bigBed.c:75:59: note: ‘blocks’ was declared here 75 | strand = R_NilValue, thickStart, thickWidth, itemRgb, blocks, | ^~~~~~ bigBed.c:236:13: warning: ‘lengthIndex’ may be used uninitialized [-Wmaybe-uninitialized] 236 | INTEGER(lengthIndex)[efIndex] = index + 1; | ^~~~~~~~~~~~~~~~~~~~ bigBed.c:76:31: note: ‘lengthIndex’ was declared here 76 | extraFields = R_NilValue, lengthIndex; | ^~~~~~~~~~~ bigBed.c:226:22: warning: ‘typeId’ may be used uninitialized [-Wmaybe-uninitialized] 226 | switch(typeId[efIndex]) { | ^ bigBed.c:141:13: note: ‘typeId’ was declared here 141 | SEXPTYPE *typeId; | ^~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c chain_io.c -o chain_io.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c twoBit.c -o twoBit.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c handlers.c -o handlers.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c utils.c -o utils.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/memgfx.c -o ucsc/memgfx.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/aliType.c -o ucsc/aliType.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/binRange.c -o ucsc/binRange.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/htmlColor.c -o ucsc/htmlColor.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/sqlList.c -o ucsc/sqlList.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/tokenizer.c -o ucsc/tokenizer.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/asParse.c -o ucsc/asParse.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/basicBed.c -o ucsc/basicBed.o ucsc/basicBed.c: In function ‘bedParseRgb’: ucsc/basicBed.c:997:1: warning: ‘strncpy’ specified bound 64 equals destination size [-Wstringop-truncation] 997 | strncpy(dupe, itemRgb, sizeof(dupe)); | ^ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bigBed.c -o ucsc/bigBed.o ucsc/bigBed.c: In function ‘extractField’: ucsc/bigBed.c:314:52: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 314 | warn("Not enough fields in extractField of %s", line); | ^~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bPlusTree.c -o ucsc/bPlusTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bbiRead.c -o ucsc/bbiRead.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bbiWrite.c -o ucsc/bbiWrite.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bwgCreate.c -o ucsc/bwgCreate.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bwgQuery.c -o ucsc/bwgQuery.o ucsc/bwgQuery.c: In function ‘bigWigIntervalQuery’: ucsc/bwgQuery.c:187:25: warning: variable ‘blockEnd’ set but not used [-Wunused-but-set-variable] 187 | char *blockPt, *blockEnd; | ^~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/cirTree.c -o ucsc/cirTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/common.c -o ucsc/common.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/dnaseq.c -o ucsc/dnaseq.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/dnautil.c -o ucsc/dnautil.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/errAbort.c -o ucsc/errAbort.o ucsc/errAbort.c: In function ‘getThreadVars’: ucsc/errAbort.c:331:5: warning: ignoring return value of ‘write’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 331 | write(STDERR_FILENO, errMsg, strlen(errMsg)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/hash.c -o ucsc/hash.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/linefile.c -o ucsc/linefile.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/localmem.c -o ucsc/localmem.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/sqlNum.c -o ucsc/sqlNum.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/zlibFace.c -o ucsc/zlibFace.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/dystring.c -o ucsc/dystring.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/hmmstats.c -o ucsc/hmmstats.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/obscure.c -o ucsc/obscure.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/pipeline.c -o ucsc/pipeline.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/rangeTree.c -o ucsc/rangeTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/rbTree.c -o ucsc/rbTree.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/memalloc.c -o ucsc/memalloc.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/dlist.c -o ucsc/dlist.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/hex.c -o ucsc/hex.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/filePath.c -o ucsc/filePath.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/htmlPage.c -o ucsc/htmlPage.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/udc.c -o ucsc/udc.o In file included from ucsc/udc.c:41: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). ucsc/udc.c: In function ‘djb2_hash’: ucsc/udc.c:1088:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 1088 | while (c = *str++) | ^ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/net.c -o ucsc/net.o In file included from ucsc/net.c:19: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). ucsc/net.c: In function ‘netConnectWithTimeout’: ucsc/net.c:148:38: warning: passing argument 3 to ‘restrict’-qualified parameter aliases with argument 4 [-Wrestrict] 148 | res = select(sd+1, NULL, &mySet, &mySet, &tempTime); | ^~~~~~ ~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/bits.c -o ucsc/bits.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/twoBit.c -o ucsc/twoBit.o In file included from ucsc/twoBit.c:15: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/_cheapcgi.c -o ucsc/_cheapcgi.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/internet.c -o ucsc/internet.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/https.c -o ucsc/https.o In file included from ucsc/https.c:17: ucsc/net.h:178:1: warning: "/*" within comment [-Wcomment] 178 | /* Use byteRange as a work-around alternate method to get file size (content-length). ucsc/https.c: In function ‘openSslInit’: ucsc/https.c:76:5: warning: ‘ERR_load_SSL_strings’ is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations] 76 | ERR_load_SSL_strings(); | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/openssl/sslerr.h:17, from /usr/include/openssl/ssl.h:44, from ucsc/https.c:8: /usr/include/openssl/sslerr_legacy.h:29:27: note: declared here 29 | OSSL_DEPRECATEDIN_3_0 int ERR_load_SSL_strings(void); | ^~~~~~~~~~~~~~~~~~~~ ucsc/https.c: At top level: ucsc/https.c:27:13: warning: ‘openssl_locking_callback’ defined but not used [-Wunused-function] 27 | static void openssl_locking_callback(int mode, int n, const char * file, int line) | ^~~~~~~~~~~~~~~~~~~~~~~~ ucsc/https.c:22:22: warning: ‘openssl_id_callback’ defined but not used [-Wunused-function] 22 | static unsigned long openssl_id_callback(void) | ^~~~~~~~~~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/base64.c -o ucsc/base64.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/verbose.c -o ucsc/verbose.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/os.c -o ucsc/os.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/wildcmp.c -o ucsc/wildcmp.o gcc -I"/usr/include/R" -DNDEBUG -DUSE_SSL -D_FILE_OFFSET_BITS=64 -I'/usr/lib64/R/library/S4Vectors/include' -I'/usr/lib64/R/library/IRanges/include' -I'/usr/lib64/R/library/XVector/include' -I/usr/local/include -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -c ucsc/_portimpl.c -o ucsc/_portimpl.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rtracklayer.so S4Vectors_stubs.o IRanges_stubs.o XVector_stubs.o R_init_rtracklayer.o readGFF.o bbiHelper.o bigWig.o bigBedHelper.o bigBed.o chain_io.o twoBit.o handlers.o utils.o ucsc/memgfx.o ucsc/aliType.o ucsc/binRange.o ucsc/htmlColor.o ucsc/sqlList.o ucsc/tokenizer.o ucsc/asParse.o ucsc/basicBed.o ucsc/bigBed.o ucsc/bPlusTree.o ucsc/bbiRead.o ucsc/bbiWrite.o ucsc/bwgCreate.o ucsc/bwgQuery.o ucsc/cirTree.o ucsc/common.o ucsc/dnaseq.o ucsc/dnautil.o ucsc/errAbort.o ucsc/hash.o ucsc/linefile.o ucsc/localmem.o ucsc/sqlNum.o ucsc/zlibFace.o ucsc/dystring.o ucsc/hmmstats.o ucsc/obscure.o ucsc/pipeline.o ucsc/rangeTree.o ucsc/rbTree.o ucsc/memalloc.o ucsc/dlist.o ucsc/hex.o ucsc/filePath.o ucsc/htmlPage.o ucsc/udc.o ucsc/net.o ucsc/bits.o ucsc/twoBit.o ucsc/_cheapcgi.o ucsc/internet.o ucsc/https.o ucsc/base64.o ucsc/verbose.o ucsc/os.o ucsc/wildcmp.o ucsc/_portimpl.o -lz -pthread -lssl -lcrypto -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/lib64/R/library/00LOCK-rtracklayer/00new/rtracklayer/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘offset’ from package ‘stats’ in package ‘rtracklayer’ ** help *** installing help indices converting help for package ‘rtracklayer’ finding HTML links ... done BEDFile-class html BamFile-methods html Bed15TrackLine-class html BigBedFile html finding level-2 HTML links ... done BigBedSelection html BigWigFile html BigWigSelection-class html BrowserViewList-class html Chain-class html FastaFile-class html GFFFile-class html GRangesForUCSCGenome html GenomicData html GenomicSelection html IntegerRangesList-methods html Quickload-class html QuickloadGenome-class html TabixFile-methods html TrackDb-class html TrackHub-class html TrackHubGenome-class html TwoBitFile-class html UCSCData-class html UCSCFile-class html UCSCSchema-class html UCSCTableQuery-class html WIGFile-class html activeView-methods html asBED html asGFF html basicTrackLine-class html blocks-methods html browseGenome html browserSession-class html browserSession-methods html browserView-class html browserView-methods html browserViews-methods html cpneTrack html genomeBrowsers html laySequence-methods html layTrack-methods html liftOver html readGFF html targets html tracks-methods html ucscGenomes html ucscSession-class html ucscTrackLine-class html ucscTrackModes-class html ucscTrackModes-methods html ucscView-class html wigToBigWig html wigTrackLine-class html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rtracklayer) + test -d rtracklayer/src + cd rtracklayer/src + rm -f IRanges_stubs.o R_init_rtracklayer.o S4Vectors_stubs.o XVector_stubs.o bbiHelper.o bigBed.o bigBedHelper.o bigWig.o chain_io.o handlers.o readGFF.o twoBit.o utils.o rtracklayer.so + rm -rf /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/lib64/R/library/R.css + rm -rf /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/lib64/R/library/rtracklayer/tests/quickload/T_species_Oct_2011/bedGraphData.bw + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.62.0-3.fc42 --unique-debug-suffix -1.62.0-3.fc42.ppc64le --unique-debug-src-base R-rtracklayer-1.62.0-3.fc42.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-rtracklayer-1.62.0-build/rtracklayer find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-rtracklayer-1.62.0-3.fc42.ppc64le 2226 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j2 /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT Scanned 37 directories and 727 files, processed 537 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-rtracklayer-1.62.0-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.wADVl4 + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd rtracklayer + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-rtracklayer-1.62.0-3.fc42.ppc64le Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.zIEtiG + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + cd rtracklayer + LICENSEDIR=/builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/share/licenses/R-rtracklayer + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/share/licenses/R-rtracklayer + cp -pr /builddir/build/BUILD/R-rtracklayer-1.62.0-build/rtracklayer/rtracklayer_jimkent_license.txt /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT/usr/share/licenses/R-rtracklayer + RPM_EC=0 ++ jobs -p + exit 0 Provides: R(rtracklayer) = 1.62.0 R-rtracklayer = 1.62.0-3.fc42 R-rtracklayer(ppc-64) = 1.62.0-3.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.4 R(BiocGenerics) >= 0.35.3 R(BiocIO) R(Biostrings) >= 2.47.6 R(GenomeInfoDb) >= 1.15.2 R(GenomicAlignments) >= 1.15.6 R(GenomicRanges) >= 1.37.2 R(IRanges) >= 2.13.13 R(RCurl) >= 1.4.2 R(Rsamtools) >= 1.31.2 R(S4Vectors) >= 0.23.18 R(XML) >= 1.98.0 R(XVector) >= 0.19.7 R(methods) R(restfulr) >= 0.0.13 R(tools) R-core >= 3.5.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.28)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libcrypto.so.3()(64bit) libcrypto.so.3(OPENSSL_3.0.0)(64bit) libssl.so.3()(64bit) libssl.so.3(OPENSSL_3.0.0)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Suggests: R(BSgenome) >= 1.33.4 R(RUnit) Processing files: R-rtracklayer-debugsource-1.62.0-3.fc42.ppc64le Provides: R-rtracklayer-debugsource = 1.62.0-3.fc42 R-rtracklayer-debugsource(ppc-64) = 1.62.0-3.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-rtracklayer-debuginfo-1.62.0-3.fc42.ppc64le Provides: R-rtracklayer-debuginfo = 1.62.0-3.fc42 R-rtracklayer-debuginfo(ppc-64) = 1.62.0-3.fc42 debuginfo(build-id) = 5bd35e1c3ab2a9eca40d7f111b5df7d9cbb5ce60 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-rtracklayer-debugsource(ppc-64) = 1.62.0-3.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-rtracklayer-1.62.0-build/BUILDROOT Wrote: /builddir/build/RPMS/R-rtracklayer-debuginfo-1.62.0-3.fc42.ppc64le.rpm Wrote: /builddir/build/RPMS/R-rtracklayer-debugsource-1.62.0-3.fc42.ppc64le.rpm Wrote: /builddir/build/RPMS/R-rtracklayer-1.62.0-3.fc42.ppc64le.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.uLeRYo + umask 022 + cd /builddir/build/BUILD/R-rtracklayer-1.62.0-build + test -d /builddir/build/BUILD/R-rtracklayer-1.62.0-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-rtracklayer-1.62.0-build + rm -rf /builddir/build/BUILD/R-rtracklayer-1.62.0-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild R-rtracklayer-1.62.0-3.fc42.src.rpm Finish: build phase for R-rtracklayer-1.62.0-3.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-41-ppc64le-1725496048.608952/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/R-rtracklayer-1.62.0-3.fc42.src.rpm) Config(child) 4 minutes 6 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "R-rtracklayer-debuginfo", "epoch": null, "version": "1.62.0", "release": "3.fc42", "arch": "ppc64le" }, { "name": "R-rtracklayer", "epoch": null, "version": "1.62.0", "release": "3.fc42", "arch": "ppc64le" }, { "name": "R-rtracklayer-debugsource", "epoch": null, "version": "1.62.0", "release": "3.fc42", "arch": "ppc64le" }, { "name": "R-rtracklayer", "epoch": null, "version": "1.62.0", "release": "3.fc42", "arch": "src" } ] } RPMResults finished