Warning: Permanently added '18.233.102.14' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6185421-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 0.68 PID: 5648 Logging PID: 5649 Task: {'appstream': False, 'background': True, 'build_id': 6185421, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '735b6c876cb00b0291d700ea9896ba08e3459b15', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.0-4', 'project_dirname': 'scipy-1.8.3', 'project_name': 'scipy-1.8.3', 'project_owner': 'psimovec', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/scipy-1.8.3/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository'}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/scipy-1.8.3--https://src.fedoraproject.org/user/releng', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/releng', 'tags': [], 'task_id': '6185421-fedora-rawhide-aarch64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/ProDy /var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/scipy-1.8.3/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy'... Running: git checkout 735b6c876cb00b0291d700ea9896ba08e3459b15 -- cmd: ['git', 'checkout', '735b6c876cb00b0291d700ea9896ba08e3459b15', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy rc: 0 stdout: stderr: Note: switching to '735b6c876cb00b0291d700ea9896ba08e3459b15'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 735b6c8 automatic import of ProDy Running: copr-distgit-client sources cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.4.0.tar.gz INFO: Calling: curl -H Pragma: -o ProDy-2.4.0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/scipy-1.8.3/ProDy/ProDy-2.4.0.tar.gz/md5/cd8edbbd2ebe14a8f62fbb5c685f2e82/ProDy-2.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Dload Upload Total Spent Left Speed 100 21.2M 100 21.2M 0 0 51.1M 0 --:--:-- --:--:-- --:--:-- 51.0M INFO: Reading stdout from command: md5sum ProDy-2.4.0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1689765859.259330 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy/ProDy.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1689765859.259330/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 13 MB/s | 1.9 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 203 MB/s | 69 MB 00:00 fedora 40 MB/s | 69 MB 00:01 Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing: dnf-plugins-core noarch 4.4.1-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k python3-dnf noarch 4.16.1-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 546 k Installing dependencies: alternatives aarch64 1.24-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k audit-libs aarch64 3.1.1-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 118 k basesystem noarch 11-17.fc39 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M sqlite-libs aarch64 3.42.0-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 676 k systemd-libs aarch64 254~rc2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 666 k tpm2-tss aarch64 4.0.1-3.fc38 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 653 k tzdata noarch 2023c-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 433 k xz-libs aarch64 5.4.3-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106 k zchunk-libs aarch64 1.3.1-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 52 k zlib aarch64 1.2.13-3.fc38 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k Transaction Summary ========================================================================================================================================= Install 140 Packages Total download size: 55 M Installed size: 264 M Downloading Packages: (1/140): alternatives-1.24-1.fc39.aarch64.rpm 788 kB/s | 38 kB 00:00 (2/140): basesystem-11-17.fc39.noarch.rpm 145 kB/s | 7.0 kB 00:00 (3/140): audit-libs-3.1.1-3.fc39.aarch64.rpm 2.3 MB/s | 118 kB 00:00 (4/140): bzip2-libs-1.0.8-13.fc38.aarch64.rpm 10 MB/s | 43 kB 00:00 (5/140): bash-5.2.15-3.fc38.aarch64.rpm 130 MB/s | 1.8 MB 00:00 (6/140): ca-certificates-2023.2.60-2.fc38.noarc 63 MB/s | 845 kB 00:00 (7/140): crypto-policies-20230614-1.git5f3458e. 14 MB/s | 65 kB 00:00 (8/140): coreutils-9.3-1.fc39.aarch64.rpm 60 MB/s | 1.1 MB 00:00 (9/140): coreutils-common-9.3-1.fc39.aarch64.rp 116 MB/s | 2.1 MB 00:00 (10/140): dbus-libs-1.14.8-1.fc39.aarch64.rpm 38 MB/s | 156 kB 00:00 (11/140): curl-8.1.2-1.fc39.aarch64.rpm 19 MB/s | 342 kB 00:00 (12/140): cyrus-sasl-lib-2.1.28-10.fc39.aarch64 45 MB/s | 780 kB 00:00 (13/140): dnf-data-4.16.1-3.fc39.noarch.rpm 10 MB/s | 38 kB 00:00 (14/140): dnf-plugins-core-4.4.1-4.fc39.noarch. 10 MB/s | 38 kB 00:00 (15/140): elfutils-default-yama-scope-0.189-3.f 4.4 MB/s | 13 kB 00:00 (16/140): expat-2.5.0-2.fc38.aarch64.rpm 30 MB/s | 108 kB 00:00 (17/140): fedora-gpg-keys-39-0.3.noarch.rpm 33 MB/s | 117 kB 00:00 (18/140): elfutils-libelf-0.189-3.fc39.aarch64. 17 MB/s | 194 kB 00:00 (19/140): fedora-release-39-0.21.noarch.rpm 1.7 MB/s | 6.9 kB 00:00 (20/140): fedora-release-common-39-0.21.noarch. 5.8 MB/s | 17 kB 00:00 (21/140): elfutils-libs-0.189-3.fc39.aarch64.rp 19 MB/s | 258 kB 00:00 (22/140): fedora-release-identity-basic-39-0.21 2.8 MB/s | 7.6 kB 00:00 (23/140): fedora-repos-39-0.3.noarch.rpm 2.8 MB/s | 8.8 kB 00:00 (24/140): fedora-repos-rawhide-39-0.3.noarch.rp 2.8 MB/s | 8.4 kB 00:00 (25/140): file-libs-5.44-4.fc39.aarch64.rpm 86 MB/s | 729 kB 00:00 (26/140): filesystem-3.18-4.fc39.aarch64.rpm 69 MB/s | 1.1 MB 00:00 (27/140): fmt-10.0.0-2.fc39.aarch64.rpm 14 MB/s | 123 kB 00:00 (28/140): findutils-4.9.0-4.fc39.aarch64.rpm 29 MB/s | 485 kB 00:00 (29/140): gdbm-libs-1.23-3.fc38.aarch64.rpm 9.9 MB/s | 56 kB 00:00 (30/140): gawk-5.2.2-1.fc39.aarch64.rpm 100 MB/s | 1.0 MB 00:00 (31/140): glibc-2.37.9000-17.fc39.aarch64.rpm 106 MB/s | 1.7 MB 00:00 (32/140): glibc-common-2.37.9000-17.fc39.aarch6 34 MB/s | 336 kB 00:00 (33/140): glibc-minimal-langpack-2.37.9000-17.f 13 MB/s | 64 kB 00:00 (34/140): gmp-6.2.1-4.fc38.aarch64.rpm 56 MB/s | 266 kB 00:00 (35/140): glib2-2.77.0-3.fc39.aarch64.rpm 87 MB/s | 2.7 MB 00:00 (36/140): gpgme-1.20.0-4.fc39.aarch64.rpm 45 MB/s | 209 kB 00:00 (37/140): gnutls-3.8.0-6.fc39.aarch64.rpm 75 MB/s | 1.0 MB 00:00 (38/140): grep-3.11-1.fc39.aarch64.rpm 35 MB/s | 285 kB 00:00 (39/140): ima-evm-utils-1.5-1.fc39.aarch64.rpm 13 MB/s | 63 kB 00:00 (40/140): gnupg2-2.4.3-1.fc39.aarch64.rpm 105 MB/s | 2.6 MB 00:00 (41/140): json-c-0.16-4.fc38.aarch64.rpm 9.2 MB/s | 41 kB 00:00 (42/140): keyutils-libs-1.6.1-6.fc38.aarch64.rp 6.8 MB/s | 31 kB 00:00 (43/140): libacl-2.3.1-7.fc39.aarch64.rpm 7.9 MB/s | 23 kB 00:00 (44/140): libarchive-3.6.1-5.fc39.aarch64.rpm 78 MB/s | 394 kB 00:00 (45/140): krb5-libs-1.21-1.fc39.aarch64.rpm 100 MB/s | 767 kB 00:00 (46/140): libassuan-2.5.6-1.fc39.aarch64.rpm 14 MB/s | 66 kB 00:00 (47/140): libattr-2.5.1-7.fc39.aarch64.rpm 5.1 MB/s | 18 kB 00:00 (48/140): libb2-0.98.1-8.fc38.aarch64.rpm 7.6 MB/s | 24 kB 00:00 (49/140): libblkid-2.39.1-2.fc39.aarch64.rpm 33 MB/s | 116 kB 00:00 (50/140): libbrotli-1.0.9-12.fc39.aarch64.rpm 69 MB/s | 319 kB 00:00 (51/140): libcap-2.48-6.fc38.aarch64.rpm 17 MB/s | 68 kB 00:00 (52/140): libcap-ng-0.8.3-6.fc39.aarch64.rpm 8.6 MB/s | 32 kB 00:00 (53/140): libcomps-0.1.19-2.fc39.aarch64.rpm 20 MB/s | 75 kB 00:00 (54/140): libcurl-8.1.2-1.fc39.aarch64.rpm 78 MB/s | 316 kB 00:00 (55/140): libcom_err-1.47.0-1.fc39.aarch64.rpm 4.2 MB/s | 26 kB 00:00 (56/140): libdnf-0.70.1-4.fc39.aarch64.rpm 108 MB/s | 606 kB 00:00 (57/140): libeconf-0.4.0-5.fc38.aarch64.rpm 6.7 MB/s | 27 kB 00:00 (58/140): libdnf5-5.1.0-1.fc39.aarch64.rpm 111 MB/s | 802 kB 00:00 (59/140): libevent-2.1.12-8.fc38.aarch64.rpm 23 MB/s | 253 kB 00:00 (60/140): libffi-3.4.4-3.fc39.aarch64.rpm 3.5 MB/s | 38 kB 00:00 (61/140): libfsverity-1.4-9.fc38.aarch64.rpm 2.0 MB/s | 19 kB 00:00 (62/140): libgcc-13.1.1-4.fc39.aarch64.rpm 26 MB/s | 92 kB 00:00 (63/140): libgomp-13.1.1-4.fc39.aarch64.rpm 68 MB/s | 309 kB 00:00 (64/140): libgcrypt-1.10.2-1.fc39.aarch64.rpm 60 MB/s | 458 kB 00:00 (65/140): libgpg-error-1.47-1.fc39.aarch64.rpm 38 MB/s | 224 kB 00:00 (66/140): libidn2-2.3.4-2.fc38.aarch64.rpm 34 MB/s | 154 kB 00:00 (67/140): libmodulemd-2.15.0-4.fc39.aarch64.rpm 55 MB/s | 210 kB 00:00 (68/140): libksba-1.6.4-1.fc39.aarch64.rpm 19 MB/s | 156 kB 00:00 (69/140): libmount-2.39.1-2.fc39.aarch64.rpm 19 MB/s | 153 kB 00:00 (70/140): libnghttp2-1.55.1-1.fc39.aarch64.rpm 12 MB/s | 76 kB 00:00 (71/140): libnsl2-2.0.0-5.fc38.aarch64.rpm 8.0 MB/s | 30 kB 00:00 (72/140): libpsl-0.21.2-3.fc39.aarch64.rpm 19 MB/s | 63 kB 00:00 (73/140): librepo-1.15.1-3.fc39.aarch64.rpm 28 MB/s | 94 kB 00:00 (74/140): libreport-filesystem-2.17.11-2.fc39.n 4.1 MB/s | 14 kB 00:00 (75/140): libselinux-3.5-4.fc39.aarch64.rpm 27 MB/s | 86 kB 00:00 (76/140): libsemanage-3.5-3.fc39.aarch64.rpm 26 MB/s | 117 kB 00:00 (77/140): libsepol-3.5-1.fc39.aarch64.rpm 68 MB/s | 311 kB 00:00 (78/140): libsigsegv-2.14-4.fc38.aarch64.rpm 6.9 MB/s | 27 kB 00:00 (79/140): libsmartcols-2.39.1-2.fc39.aarch64.rp 20 MB/s | 65 kB 00:00 (80/140): libsolv-0.7.24-6.fc39.aarch64.rpm 76 MB/s | 404 kB 00:00 (81/140): libssh-0.10.5-1.fc39.aarch64.rpm 33 MB/s | 212 kB 00:00 (82/140): libssh-config-0.10.5-1.fc39.noarch.rp 1.3 MB/s | 9.0 kB 00:00 (83/140): libtasn1-4.19.0-2.fc38.aarch64.rpm 15 MB/s | 73 kB 00:00 (84/140): libstdc++-13.1.1-4.fc39.aarch64.rpm 96 MB/s | 812 kB 00:00 (85/140): libtirpc-1.3.3-1.rc1.fc39.aarch64.rpm 24 MB/s | 95 kB 00:00 (86/140): libunistring1.0-1.0-1.fc38.aarch64.rp 75 MB/s | 536 kB 00:00 (87/140): libuuid-2.39.1-2.fc39.aarch64.rpm 6.3 MB/s | 28 kB 00:00 (88/140): libunistring-1.1-3.fc38.aarch64.rpm 57 MB/s | 540 kB 00:00 (89/140): libverto-0.3.2-5.fc38.aarch64.rpm 5.8 MB/s | 21 kB 00:00 (90/140): libxcrypt-4.4.36-1.fc39.aarch64.rpm 25 MB/s | 123 kB 00:00 (91/140): libxml2-2.10.4-2.fc39.aarch64.rpm 116 MB/s | 689 kB 00:00 (92/140): libyaml-0.2.5-9.fc38.aarch64.rpm 16 MB/s | 59 kB 00:00 (93/140): libzstd-1.5.5-1.fc39.aarch64.rpm 58 MB/s | 280 kB 00:00 (94/140): lua-libs-5.4.4-9.fc39.aarch64.rpm 32 MB/s | 130 kB 00:00 (95/140): lz4-libs-1.9.4-3.fc39.aarch64.rpm 20 MB/s | 68 kB 00:00 (96/140): mpdecimal-2.5.1-6.fc38.aarch64.rpm 18 MB/s | 90 kB 00:00 (97/140): ncurses-base-6.4-5.20230520.fc39.noar 15 MB/s | 63 kB 00:00 (98/140): mpfr-4.2.0-2.fc39.aarch64.rpm 53 MB/s | 319 kB 00:00 (99/140): ncurses-libs-6.4-5.20230520.fc39.aarc 59 MB/s | 325 kB 00:00 (100/140): nettle-3.9.1-1.fc39.aarch64.rpm 73 MB/s | 434 kB 00:00 (101/140): npth-1.6-13.fc39.aarch64.rpm 4.4 MB/s | 24 kB 00:00 (102/140): p11-kit-0.24.1-6.fc38.aarch64.rpm 58 MB/s | 339 kB 00:00 (103/140): openldap-2.6.4-3.fc39.aarch64.rpm 32 MB/s | 251 kB 00:00 (104/140): openssl-libs-3.0.8-2.fc39.aarch64.rp 161 MB/s | 2.0 MB 00:00 (105/140): p11-kit-trust-0.24.1-6.fc38.aarch64. 21 MB/s | 136 kB 00:00 (106/140): pcre2-10.42-1.fc38.1.aarch64.rpm 43 MB/s | 220 kB 00:00 (107/140): pcre2-syntax-10.42-1.fc38.1.noarch.r 40 MB/s | 144 kB 00:00 (108/140): popt-1.19-2.fc38.aarch64.rpm 16 MB/s | 59 kB 00:00 (109/140): publicsuffix-list-dafsa-20230614-1.f 15 MB/s | 57 kB 00:00 (110/140): python3-3.12.0~b4-1.fc39.aarch64.rpm 6.1 MB/s | 26 kB 00:00 (111/140): python3-dateutil-2.8.2-9.fc39.noarch 57 MB/s | 344 kB 00:00 (112/140): python-pip-wheel-23.1.2-2.fc39.noarc 144 MB/s | 1.4 MB 00:00 (113/140): python3-dnf-4.16.1-3.fc39.noarch.rpm 91 MB/s | 546 kB 00:00 (114/140): python3-dbus-1.3.2-3.fc39.aarch64.rp 14 MB/s | 146 kB 00:00 (115/140): python3-distro-1.8.0-5.fc39.noarch.r 4.9 MB/s | 44 kB 00:00 (116/140): python3-dnf-plugins-core-4.4.1-4.fc3 47 MB/s | 278 kB 00:00 (117/140): python3-gpg-1.20.0-4.fc39.aarch64.rp 49 MB/s | 280 kB 00:00 (118/140): python3-hawkey-0.70.1-4.fc39.aarch64 18 MB/s | 99 kB 00:00 (119/140): python3-libcomps-0.1.19-2.fc39.aarch 11 MB/s | 48 kB 00:00 (120/140): python3-libdnf-0.70.1-4.fc39.aarch64 72 MB/s | 774 kB 00:00 (121/140): python3-rpm-4.18.91-7.fc39.aarch64.r 8.0 MB/s | 67 kB 00:00 (122/140): python3-six-1.16.0-11.fc39.noarch.rp 6.8 MB/s | 41 kB 00:00 (123/140): python3-systemd-235-4.fc39.aarch64.r 20 MB/s | 100 kB 00:00 (124/140): readline-8.2-3.fc38.aarch64.rpm 29 MB/s | 211 kB 00:00 (125/140): rpm-4.18.91-7.fc39.aarch64.rpm 65 MB/s | 501 kB 00:00 (126/140): rpm-build-libs-4.18.91-7.fc39.aarch6 19 MB/s | 92 kB 00:00 (127/140): rpm-libs-4.18.91-7.fc39.aarch64.rpm 55 MB/s | 304 kB 00:00 (128/140): python3-libs-3.12.0~b4-1.fc39.aarch6 195 MB/s | 8.8 MB 00:00 (129/140): rpm-sequoia-1.4.1-1.fc39.aarch64.rpm 66 MB/s | 804 kB 00:00 (130/140): rpm-sign-libs-4.18.91-7.fc39.aarch64 2.1 MB/s | 26 kB 00:00 (131/140): setup-2.14.3-3.fc39.noarch.rpm 37 MB/s | 146 kB 00:00 (132/140): sed-4.8-12.fc38.aarch64.rpm 46 MB/s | 295 kB 00:00 (133/140): shadow-utils-4.13-7.fc39.aarch64.rpm 151 MB/s | 1.2 MB 00:00 (134/140): systemd-libs-254~rc2-4.fc39.aarch64. 93 MB/s | 666 kB 00:00 (135/140): sqlite-libs-3.42.0-6.fc39.aarch64.rp 64 MB/s | 676 kB 00:00 (136/140): tpm2-tss-4.0.1-3.fc38.aarch64.rpm 99 MB/s | 653 kB 00:00 (137/140): xz-libs-5.4.3-1.fc39.aarch64.rpm 22 MB/s | 106 kB 00:00 (138/140): zchunk-libs-1.3.1-1.fc39.aarch64.rpm 12 MB/s | 52 kB 00:00 (139/140): tzdata-2023c-1.fc39.noarch.rpm 42 MB/s | 433 kB 00:00 (140/140): zlib-1.2.13-3.fc38.aarch64.rpm 21 MB/s | 93 kB 00:00 -------------------------------------------------------------------------------- Total 133 MB/s | 55 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.aarch64 1/1 Preparing : 1/1 Installing : libgcc-13.1.1-4.fc39.aarch64 1/140 Running scriptlet: libgcc-13.1.1-4.fc39.aarch64 1/140 Installing : tzdata-2023c-1.fc39.noarch 2/140 Installing : crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/140 Running scriptlet: crypto-policies-20230614-1.git5f3458e.fc39.noarc 3/140 Installing : fedora-release-identity-basic-39-0.21.noarch 4/140 Installing : publicsuffix-list-dafsa-20230614-1.fc39.noarch 5/140 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 6/140 Installing : ncurses-base-6.4-5.20230520.fc39.noarch 7/140 Installing : libssh-config-0.10.5-1.fc39.noarch 8/140 Installing : libreport-filesystem-2.17.11-2.fc39.noarch 9/140 Installing : fedora-gpg-keys-39-0.3.noarch 10/140 Installing : fedora-release-39-0.21.noarch 11/140 Installing : fedora-release-common-39-0.21.noarch 12/140 Installing : fedora-repos-rawhide-39-0.3.noarch 13/140 Installing : fedora-repos-39-0.3.noarch 14/140 Installing : setup-2.14.3-3.fc39.noarch 15/140 Running scriptlet: setup-2.14.3-3.fc39.noarch 15/140 Installing : filesystem-3.18-4.fc39.aarch64 16/140 Installing : basesystem-11-17.fc39.noarch 17/140 Installing : glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 18/140 Installing : glibc-common-2.37.9000-17.fc39.aarch64 19/140 Running scriptlet: glibc-2.37.9000-17.fc39.aarch64 20/140 Installing : glibc-2.37.9000-17.fc39.aarch64 20/140 Running scriptlet: glibc-2.37.9000-17.fc39.aarch64 20/140 Installing : ncurses-libs-6.4-5.20230520.fc39.aarch64 21/140 Installing : bash-5.2.15-3.fc38.aarch64 22/140 Running scriptlet: bash-5.2.15-3.fc38.aarch64 22/140 Installing : zlib-1.2.13-3.fc38.aarch64 23/140 Installing : bzip2-libs-1.0.8-13.fc38.aarch64 24/140 Installing : libzstd-1.5.5-1.fc39.aarch64 25/140 Installing : xz-libs-5.4.3-1.fc39.aarch64 26/140 Installing : libxml2-2.10.4-2.fc39.aarch64 27/140 Installing : sqlite-libs-3.42.0-6.fc39.aarch64 28/140 Installing : gmp-1:6.2.1-4.fc38.aarch64 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libgomp-13.1.1-4.fc39.aarch64 49/140 Installing : libsepol-3.5-1.fc39.aarch64 50/140 Installing : libselinux-3.5-4.fc39.aarch64 51/140 Installing : sed-4.8-12.fc38.aarch64 52/140 Installing : libsmartcols-2.39.1-2.fc39.aarch64 53/140 Installing : libtasn1-4.19.0-2.fc38.aarch64 54/140 Installing : libunistring-1.1-3.fc38.aarch64 55/140 Installing : lua-libs-5.4.4-9.fc39.aarch64 56/140 Installing : lz4-libs-1.9.4-3.fc39.aarch64 57/140 Installing : systemd-libs-254~rc2-4.fc39.aarch64 58/140 Installing : dbus-libs-1:1.14.8-1.fc39.aarch64 59/140 Installing : findutils-1:4.9.0-4.fc39.aarch64 60/140 Installing : libb2-0.98.1-8.fc38.aarch64 61/140 Installing : cyrus-sasl-lib-2.1.28-10.fc39.aarch64 62/140 Installing : libcomps-0.1.19-2.fc39.aarch64 63/140 Installing : grep-3.11-1.fc39.aarch64 64/140 Installing : libblkid-2.39.1-2.fc39.aarch64 65/140 Installing : libmount-2.39.1-2.fc39.aarch64 66/140 Installing : fmt-10.0.0-2.fc39.aarch64 67/140 Installing : libgcrypt-1.10.2-1.fc39.aarch64 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gawk-5.2.2-1.fc39.aarch64 85/140 Installing : libunistring1.0-1.0-1.fc38.aarch64 86/140 Installing : libidn2-2.3.4-2.fc38.aarch64 87/140 Installing : gnutls-3.8.0-6.fc39.aarch64 88/140 Installing : glib2-2.77.0-3.fc39.aarch64 89/140 Installing : libpsl-0.21.2-3.fc39.aarch64 90/140 Installing : libverto-0.3.2-5.fc38.aarch64 91/140 Installing : libyaml-0.2.5-9.fc38.aarch64 92/140 Installing : mpdecimal-2.5.1-6.fc38.aarch64 93/140 Installing : npth-1.6-13.fc39.aarch64 94/140 Installing : coreutils-common-9.3-1.fc39.aarch64 95/140 Installing : openssl-libs-1:3.0.8-2.fc39.aarch64 96/140 Installing : coreutils-9.3-1.fc39.aarch64 97/140 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 98/140 Installing : ca-certificates-2023.2.60-2.fc38.noarch 98/140 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 98/140 Installing : krb5-libs-1.21-1.fc39.aarch64 99/140 Installing : libtirpc-1.3.3-1.rc1.fc39.aarch64 100/140 Installing : zchunk-libs-1.3.1-1.fc39.aarch64 101/140 Installing : libnsl2-2.0.0-5.fc38.aarch64 102/140 Installing : libssh-0.10.5-1.fc39.aarch64 103/140 Installing : python-pip-wheel-23.1.2-2.fc39.noarch 104/140 Installing : python3-3.12.0~b4-1.fc39.aarch64 105/140 Installing : python3-libs-3.12.0~b4-1.fc39.aarch64 106/140 Installing : python3-libcomps-0.1.19-2.fc39.aarch64 107/140 Installing : python3-dbus-1.3.2-3.fc39.aarch64 108/140 Installing : python3-distro-1.8.0-5.fc39.noarch 109/140 Installing : python3-six-1.16.0-11.fc39.noarch 110/140 Installing : python3-dateutil-1:2.8.2-9.fc39.noarch 111/140 Installing : python3-systemd-235-4.fc39.aarch64 112/140 Installing : libarchive-3.6.1-5.fc39.aarch64 113/140 Installing : libevent-2.1.12-8.fc38.aarch64 114/140 Installing : openldap-2.6.4-3.fc39.aarch64 115/140 Installing : libcurl-8.1.2-1.fc39.aarch64 116/140 Running scriptlet: tpm2-tss-4.0.1-3.fc38.aarch64 117/140 useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Installing : tpm2-tss-4.0.1-3.fc38.aarch64 117/140 Installing : gnupg2-2.4.3-1.fc39.aarch64 118/140 Installing : gpgme-1.20.0-4.fc39.aarch64 119/140 Installing : librepo-1.15.1-3.fc39.aarch64 120/140 Installing : python3-gpg-1.20.0-4.fc39.aarch64 121/140 Installing : ima-evm-utils-1.5-1.fc39.aarch64 122/140 Installing : curl-8.1.2-1.fc39.aarch64 123/140 Installing : libfsverity-1.4-9.fc38.aarch64 124/140 Installing : rpm-sequoia-1.4.1-1.fc39.aarch64 125/140 Installing : rpm-libs-4.18.91-7.fc39.aarch64 126/140 Installing : libmodulemd-2.15.0-4.fc39.aarch64 127/140 Installing : libsolv-0.7.24-6.fc39.aarch64 128/140 Installing : libdnf-0.70.1-4.fc39.aarch64 129/140 Installing : python3-libdnf-0.70.1-4.fc39.aarch64 130/140 Installing : python3-hawkey-0.70.1-4.fc39.aarch64 131/140 Installing : libdnf5-5.1.0-1.fc39.aarch64 132/140 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : dnf-data-4.16.1-3.fc39.noarch 133/140 Installing : rpm-build-libs-4.18.91-7.fc39.aarch64 134/140 Installing : rpm-sign-libs-4.18.91-7.fc39.aarch64 135/140 Installing : python3-rpm-4.18.91-7.fc39.aarch64 136/140 Installing : python3-dnf-4.16.1-3.fc39.noarch 137/140 Installing : python3-dnf-plugins-core-4.4.1-4.fc39.noarch 138/140 Installing : dnf-plugins-core-4.4.1-4.fc39.noarch 139/140 Running scriptlet: rpm-4.18.91-7.fc39.aarch64 140/140 Installing : rpm-4.18.91-7.fc39.aarch64 140/140 Running scriptlet: filesystem-3.18-4.fc39.aarch64 140/140 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 140/140 Running scriptlet: rpm-4.18.91-7.fc39.aarch64 140/140 Verifying : alternatives-1.24-1.fc39.aarch64 1/140 Verifying : audit-libs-3.1.1-3.fc39.aarch64 2/140 Verifying : basesystem-11-17.fc39.noarch 3/140 Verifying : bash-5.2.15-3.fc38.aarch64 4/140 Verifying : bzip2-libs-1.0.8-13.fc38.aarch64 5/140 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 6/140 Verifying : coreutils-9.3-1.fc39.aarch64 7/140 Verifying : coreutils-common-9.3-1.fc39.aarch64 8/140 Verifying : crypto-policies-20230614-1.git5f3458e.fc39.noarc 9/140 Verifying : curl-8.1.2-1.fc39.aarch64 10/140 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.aarch64 11/140 Verifying : dbus-libs-1:1.14.8-1.fc39.aarch64 12/140 Verifying : dnf-data-4.16.1-3.fc39.noarch 13/140 Verifying : dnf-plugins-core-4.4.1-4.fc39.noarch 14/140 Verifying : elfutils-default-yama-scope-0.189-3.fc39.noarch 15/140 Verifying : elfutils-libelf-0.189-3.fc39.aarch64 16/140 Verifying : elfutils-libs-0.189-3.fc39.aarch64 17/140 Verifying : expat-2.5.0-2.fc38.aarch64 18/140 Verifying : fedora-gpg-keys-39-0.3.noarch 19/140 Verifying : fedora-release-39-0.21.noarch 20/140 Verifying : fedora-release-common-39-0.21.noarch 21/140 Verifying : fedora-release-identity-basic-39-0.21.noarch 22/140 Verifying : fedora-repos-39-0.3.noarch 23/140 Verifying : fedora-repos-rawhide-39-0.3.noarch 24/140 Verifying : file-libs-5.44-4.fc39.aarch64 25/140 Verifying : filesystem-3.18-4.fc39.aarch64 26/140 Verifying : findutils-1:4.9.0-4.fc39.aarch64 27/140 Verifying : fmt-10.0.0-2.fc39.aarch64 28/140 Verifying : gawk-5.2.2-1.fc39.aarch64 29/140 Verifying : gdbm-libs-1:1.23-3.fc38.aarch64 30/140 Verifying : glib2-2.77.0-3.fc39.aarch64 31/140 Verifying : glibc-2.37.9000-17.fc39.aarch64 32/140 Verifying : glibc-common-2.37.9000-17.fc39.aarch64 33/140 Verifying : glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 34/140 Verifying : gmp-1:6.2.1-4.fc38.aarch64 35/140 Verifying : gnupg2-2.4.3-1.fc39.aarch64 36/140 Verifying : gnutls-3.8.0-6.fc39.aarch64 37/140 Verifying : gpgme-1.20.0-4.fc39.aarch64 38/140 Verifying : grep-3.11-1.fc39.aarch64 39/140 Verifying : ima-evm-utils-1.5-1.fc39.aarch64 40/140 Verifying : json-c-0.16-4.fc38.aarch64 41/140 Verifying : keyutils-libs-1.6.1-6.fc38.aarch64 42/140 Verifying : krb5-libs-1.21-1.fc39.aarch64 43/140 Verifying : libacl-2.3.1-7.fc39.aarch64 44/140 Verifying : libarchive-3.6.1-5.fc39.aarch64 45/140 Verifying : libassuan-2.5.6-1.fc39.aarch64 46/140 Verifying : libattr-2.5.1-7.fc39.aarch64 47/140 Verifying : libb2-0.98.1-8.fc38.aarch64 48/140 Verifying : libblkid-2.39.1-2.fc39.aarch64 49/140 Verifying : libbrotli-1.0.9-12.fc39.aarch64 50/140 Verifying : libcap-2.48-6.fc38.aarch64 51/140 Verifying : libcap-ng-0.8.3-6.fc39.aarch64 52/140 Verifying : libcom_err-1.47.0-1.fc39.aarch64 53/140 Verifying : libcomps-0.1.19-2.fc39.aarch64 54/140 Verifying : libcurl-8.1.2-1.fc39.aarch64 55/140 Verifying : libdnf-0.70.1-4.fc39.aarch64 56/140 Verifying : libdnf5-5.1.0-1.fc39.aarch64 57/140 Verifying : libeconf-0.4.0-5.fc38.aarch64 58/140 Verifying : libevent-2.1.12-8.fc38.aarch64 59/140 Verifying : libffi-3.4.4-3.fc39.aarch64 60/140 Verifying : libfsverity-1.4-9.fc38.aarch64 61/140 Verifying : libgcc-13.1.1-4.fc39.aarch64 62/140 Verifying : libgcrypt-1.10.2-1.fc39.aarch64 63/140 Verifying : libgomp-13.1.1-4.fc39.aarch64 64/140 Verifying : libgpg-error-1.47-1.fc39.aarch64 65/140 Verifying : libidn2-2.3.4-2.fc38.aarch64 66/140 Verifying : libksba-1.6.4-1.fc39.aarch64 67/140 Verifying : libmodulemd-2.15.0-4.fc39.aarch64 68/140 Verifying : libmount-2.39.1-2.fc39.aarch64 69/140 Verifying : libnghttp2-1.55.1-1.fc39.aarch64 70/140 Verifying : libnsl2-2.0.0-5.fc38.aarch64 71/140 Verifying : libpsl-0.21.2-3.fc39.aarch64 72/140 Verifying : librepo-1.15.1-3.fc39.aarch64 73/140 Verifying : libreport-filesystem-2.17.11-2.fc39.noarch 74/140 Verifying : libselinux-3.5-4.fc39.aarch64 75/140 Verifying : libsemanage-3.5-3.fc39.aarch64 76/140 Verifying : libsepol-3.5-1.fc39.aarch64 77/140 Verifying : libsigsegv-2.14-4.fc38.aarch64 78/140 Verifying : libsmartcols-2.39.1-2.fc39.aarch64 79/140 Verifying : libsolv-0.7.24-6.fc39.aarch64 80/140 Verifying : libssh-0.10.5-1.fc39.aarch64 81/140 Verifying : libssh-config-0.10.5-1.fc39.noarch 82/140 Verifying : libstdc++-13.1.1-4.fc39.aarch64 83/140 Verifying : libtasn1-4.19.0-2.fc38.aarch64 84/140 Verifying : libtirpc-1.3.3-1.rc1.fc39.aarch64 85/140 Verifying : libunistring-1.1-3.fc38.aarch64 86/140 Verifying : libunistring1.0-1.0-1.fc38.aarch64 87/140 Verifying : libuuid-2.39.1-2.fc39.aarch64 88/140 Verifying : libverto-0.3.2-5.fc38.aarch64 89/140 Verifying : libxcrypt-4.4.36-1.fc39.aarch64 90/140 Verifying : libxml2-2.10.4-2.fc39.aarch64 91/140 Verifying : libyaml-0.2.5-9.fc38.aarch64 92/140 Verifying : libzstd-1.5.5-1.fc39.aarch64 93/140 Verifying : lua-libs-5.4.4-9.fc39.aarch64 94/140 Verifying : lz4-libs-1.9.4-3.fc39.aarch64 95/140 Verifying : mpdecimal-2.5.1-6.fc38.aarch64 96/140 Verifying : mpfr-4.2.0-2.fc39.aarch64 97/140 Verifying : ncurses-base-6.4-5.20230520.fc39.noarch 98/140 Verifying : ncurses-libs-6.4-5.20230520.fc39.aarch64 99/140 Verifying : nettle-3.9.1-1.fc39.aarch64 100/140 Verifying : npth-1.6-13.fc39.aarch64 101/140 Verifying : openldap-2.6.4-3.fc39.aarch64 102/140 Verifying : openssl-libs-1:3.0.8-2.fc39.aarch64 103/140 Verifying : p11-kit-0.24.1-6.fc38.aarch64 104/140 Verifying : p11-kit-trust-0.24.1-6.fc38.aarch64 105/140 Verifying : pcre2-10.42-1.fc38.1.aarch64 106/140 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 107/140 Verifying : popt-1.19-2.fc38.aarch64 108/140 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 109/140 Verifying : python-pip-wheel-23.1.2-2.fc39.noarch 110/140 Verifying : python3-3.12.0~b4-1.fc39.aarch64 111/140 Verifying : python3-dateutil-1:2.8.2-9.fc39.noarch 112/140 Verifying : python3-dbus-1.3.2-3.fc39.aarch64 113/140 Verifying : python3-distro-1.8.0-5.fc39.noarch 114/140 Verifying : python3-dnf-4.16.1-3.fc39.noarch 115/140 Verifying : python3-dnf-plugins-core-4.4.1-4.fc39.noarch 116/140 Verifying : python3-gpg-1.20.0-4.fc39.aarch64 117/140 Verifying : python3-hawkey-0.70.1-4.fc39.aarch64 118/140 Verifying : python3-libcomps-0.1.19-2.fc39.aarch64 119/140 Verifying : python3-libdnf-0.70.1-4.fc39.aarch64 120/140 Verifying : python3-libs-3.12.0~b4-1.fc39.aarch64 121/140 Verifying : python3-rpm-4.18.91-7.fc39.aarch64 122/140 Verifying : python3-six-1.16.0-11.fc39.noarch 123/140 Verifying : python3-systemd-235-4.fc39.aarch64 124/140 Verifying : readline-8.2-3.fc38.aarch64 125/140 Verifying : rpm-4.18.91-7.fc39.aarch64 126/140 Verifying : rpm-build-libs-4.18.91-7.fc39.aarch64 127/140 Verifying : rpm-libs-4.18.91-7.fc39.aarch64 128/140 Verifying : rpm-sequoia-1.4.1-1.fc39.aarch64 129/140 Verifying : rpm-sign-libs-4.18.91-7.fc39.aarch64 130/140 Verifying : sed-4.8-12.fc38.aarch64 131/140 Verifying : setup-2.14.3-3.fc39.noarch 132/140 Verifying : shadow-utils-2:4.13-7.fc39.aarch64 133/140 Verifying : sqlite-libs-3.42.0-6.fc39.aarch64 134/140 Verifying : systemd-libs-254~rc2-4.fc39.aarch64 135/140 Verifying : tpm2-tss-4.0.1-3.fc38.aarch64 136/140 Verifying : tzdata-2023c-1.fc39.noarch 137/140 Verifying : xz-libs-5.4.3-1.fc39.aarch64 138/140 Verifying : zchunk-libs-1.3.1-1.fc39.aarch64 139/140 Verifying : zlib-1.2.13-3.fc38.aarch64 140/140 Installed products updated. Installed: alternatives-1.24-1.fc39.aarch64 audit-libs-3.1.1-3.fc39.aarch64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.aarch64 bzip2-libs-1.0.8-13.fc38.aarch64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.aarch64 coreutils-common-9.3-1.fc39.aarch64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.aarch64 cyrus-sasl-lib-2.1.28-10.fc39.aarch64 dbus-libs-1:1.14.8-1.fc39.aarch64 dnf-data-4.16.1-3.fc39.noarch dnf-plugins-core-4.4.1-4.fc39.noarch elfutils-default-yama-scope-0.189-3.fc39.noarch elfutils-libelf-0.189-3.fc39.aarch64 elfutils-libs-0.189-3.fc39.aarch64 expat-2.5.0-2.fc38.aarch64 fedora-gpg-keys-39-0.3.noarch fedora-release-39-0.21.noarch fedora-release-common-39-0.21.noarch fedora-release-identity-basic-39-0.21.noarch fedora-repos-39-0.3.noarch fedora-repos-rawhide-39-0.3.noarch file-libs-5.44-4.fc39.aarch64 filesystem-3.18-4.fc39.aarch64 findutils-1:4.9.0-4.fc39.aarch64 fmt-10.0.0-2.fc39.aarch64 gawk-5.2.2-1.fc39.aarch64 gdbm-libs-1:1.23-3.fc38.aarch64 glib2-2.77.0-3.fc39.aarch64 glibc-2.37.9000-17.fc39.aarch64 glibc-common-2.37.9000-17.fc39.aarch64 glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 gmp-1:6.2.1-4.fc38.aarch64 gnupg2-2.4.3-1.fc39.aarch64 gnutls-3.8.0-6.fc39.aarch64 gpgme-1.20.0-4.fc39.aarch64 grep-3.11-1.fc39.aarch64 ima-evm-utils-1.5-1.fc39.aarch64 json-c-0.16-4.fc38.aarch64 keyutils-libs-1.6.1-6.fc38.aarch64 krb5-libs-1.21-1.fc39.aarch64 libacl-2.3.1-7.fc39.aarch64 libarchive-3.6.1-5.fc39.aarch64 libassuan-2.5.6-1.fc39.aarch64 libattr-2.5.1-7.fc39.aarch64 libb2-0.98.1-8.fc38.aarch64 libblkid-2.39.1-2.fc39.aarch64 libbrotli-1.0.9-12.fc39.aarch64 libcap-2.48-6.fc38.aarch64 libcap-ng-0.8.3-6.fc39.aarch64 libcom_err-1.47.0-1.fc39.aarch64 libcomps-0.1.19-2.fc39.aarch64 libcurl-8.1.2-1.fc39.aarch64 libdnf-0.70.1-4.fc39.aarch64 libdnf5-5.1.0-1.fc39.aarch64 libeconf-0.4.0-5.fc38.aarch64 libevent-2.1.12-8.fc38.aarch64 libffi-3.4.4-3.fc39.aarch64 libfsverity-1.4-9.fc38.aarch64 libgcc-13.1.1-4.fc39.aarch64 libgcrypt-1.10.2-1.fc39.aarch64 libgomp-13.1.1-4.fc39.aarch64 libgpg-error-1.47-1.fc39.aarch64 libidn2-2.3.4-2.fc38.aarch64 libksba-1.6.4-1.fc39.aarch64 libmodulemd-2.15.0-4.fc39.aarch64 libmount-2.39.1-2.fc39.aarch64 libnghttp2-1.55.1-1.fc39.aarch64 libnsl2-2.0.0-5.fc38.aarch64 libpsl-0.21.2-3.fc39.aarch64 librepo-1.15.1-3.fc39.aarch64 libreport-filesystem-2.17.11-2.fc39.noarch libselinux-3.5-4.fc39.aarch64 libsemanage-3.5-3.fc39.aarch64 libsepol-3.5-1.fc39.aarch64 libsigsegv-2.14-4.fc38.aarch64 libsmartcols-2.39.1-2.fc39.aarch64 libsolv-0.7.24-6.fc39.aarch64 libssh-0.10.5-1.fc39.aarch64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.aarch64 libtasn1-4.19.0-2.fc38.aarch64 libtirpc-1.3.3-1.rc1.fc39.aarch64 libunistring-1.1-3.fc38.aarch64 libunistring1.0-1.0-1.fc38.aarch64 libuuid-2.39.1-2.fc39.aarch64 libverto-0.3.2-5.fc38.aarch64 libxcrypt-4.4.36-1.fc39.aarch64 libxml2-2.10.4-2.fc39.aarch64 libyaml-0.2.5-9.fc38.aarch64 libzstd-1.5.5-1.fc39.aarch64 lua-libs-5.4.4-9.fc39.aarch64 lz4-libs-1.9.4-3.fc39.aarch64 mpdecimal-2.5.1-6.fc38.aarch64 mpfr-4.2.0-2.fc39.aarch64 ncurses-base-6.4-5.20230520.fc39.noarch ncurses-libs-6.4-5.20230520.fc39.aarch64 nettle-3.9.1-1.fc39.aarch64 npth-1.6-13.fc39.aarch64 openldap-2.6.4-3.fc39.aarch64 openssl-libs-1:3.0.8-2.fc39.aarch64 p11-kit-0.24.1-6.fc38.aarch64 p11-kit-trust-0.24.1-6.fc38.aarch64 pcre2-10.42-1.fc38.1.aarch64 pcre2-syntax-10.42-1.fc38.1.noarch popt-1.19-2.fc38.aarch64 publicsuffix-list-dafsa-20230614-1.fc39.noarch python-pip-wheel-23.1.2-2.fc39.noarch python3-3.12.0~b4-1.fc39.aarch64 python3-dateutil-1:2.8.2-9.fc39.noarch python3-dbus-1.3.2-3.fc39.aarch64 python3-distro-1.8.0-5.fc39.noarch python3-dnf-4.16.1-3.fc39.noarch python3-dnf-plugins-core-4.4.1-4.fc39.noarch python3-gpg-1.20.0-4.fc39.aarch64 python3-hawkey-0.70.1-4.fc39.aarch64 python3-libcomps-0.1.19-2.fc39.aarch64 python3-libdnf-0.70.1-4.fc39.aarch64 python3-libs-3.12.0~b4-1.fc39.aarch64 python3-rpm-4.18.91-7.fc39.aarch64 python3-six-1.16.0-11.fc39.noarch python3-systemd-235-4.fc39.aarch64 readline-8.2-3.fc38.aarch64 rpm-4.18.91-7.fc39.aarch64 rpm-build-libs-4.18.91-7.fc39.aarch64 rpm-libs-4.18.91-7.fc39.aarch64 rpm-sequoia-1.4.1-1.fc39.aarch64 rpm-sign-libs-4.18.91-7.fc39.aarch64 sed-4.8-12.fc38.aarch64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.aarch64 sqlite-libs-3.42.0-6.fc39.aarch64 systemd-libs-254~rc2-4.fc39.aarch64 tpm2-tss-4.0.1-3.fc38.aarch64 tzdata-2023c-1.fc39.noarch xz-libs-5.4.3-1.fc39.aarch64 zchunk-libs-1.3.1-1.fc39.aarch64 zlib-1.2.13-3.fc38.aarch64 Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 23 MB/s | 1.9 MB 00:00 Additional repo http_kojipkgs_fedoraproject_org 202 MB/s | 69 MB 00:00 fedora 45 MB/s | 69 MB 00:01 Dependencies resolved. ========================================================================================================================================= Package Arch Version Repository Size ========================================================================================================================================= Installing group/module packages: bash aarch64 5.2.15-3.fc38 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aarch64 2.39.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 476 k xxhash-libs aarch64 0.8.1-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33 k xz-libs aarch64 5.4.3-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 106 k zip aarch64 3.0-36.fc38 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 262 k zlib aarch64 1.2.13-3.fc38 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k zstd aarch64 1.5.5-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 445 k Installing Groups: Buildsystem building group Transaction Summary ========================================================================================================================================= Install 154 Packages Total download size: 52 M Installed size: 304 M Downloading Packages: (1/154): alternatives-1.24-1.fc39.aarch64.rpm 940 kB/s | 38 kB 00:00 (2/154): ansible-srpm-macros-1-10.fc39.noarch.r 498 kB/s | 21 kB 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Running transaction test Transaction test succeeded. 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glibc-common-2.37.9000-17.fc39.aarch64 47/154 Verifying : glibc-gconv-extra-2.37.9000-17.fc39.aarch64 48/154 Verifying : glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 49/154 Verifying : gmp-1:6.2.1-4.fc38.aarch64 50/154 Verifying : gnat-srpm-macros-6-2.fc38.noarch 51/154 Verifying : go-srpm-macros-3.2.0-3.fc39.noarch 52/154 Verifying : grep-3.11-1.fc39.aarch64 53/154 Verifying : gzip-1.12-3.fc38.aarch64 54/154 Verifying : info-7.0.3-2.fc39.aarch64 55/154 Verifying : jansson-2.13.1-6.fc38.aarch64 56/154 Verifying : kernel-srpm-macros-1.0-19.fc39.noarch 57/154 Verifying : keyutils-libs-1.6.1-6.fc38.aarch64 58/154 Verifying : krb5-libs-1.21-1.fc39.aarch64 59/154 Verifying : libacl-2.3.1-7.fc39.aarch64 60/154 Verifying : libarchive-3.6.1-5.fc39.aarch64 61/154 Verifying : libattr-2.5.1-7.fc39.aarch64 62/154 Verifying : libblkid-2.39.1-2.fc39.aarch64 63/154 Verifying : libbrotli-1.0.9-12.fc39.aarch64 64/154 Verifying : libcap-2.48-6.fc38.aarch64 65/154 Verifying : libcap-ng-0.8.3-6.fc39.aarch64 66/154 Verifying : libcom_err-1.47.0-1.fc39.aarch64 67/154 Verifying : libcurl-8.1.2-1.fc39.aarch64 68/154 Verifying : libdb-5.3.28-55.fc38.aarch64 69/154 Verifying : libeconf-0.4.0-5.fc38.aarch64 70/154 Verifying : libevent-2.1.12-8.fc38.aarch64 71/154 Verifying : libfdisk-2.39.1-2.fc39.aarch64 72/154 Verifying : libffi-3.4.4-3.fc39.aarch64 73/154 Verifying : libgcc-13.1.1-4.fc39.aarch64 74/154 Verifying : libgomp-13.1.1-4.fc39.aarch64 75/154 Verifying : libidn2-2.3.4-2.fc38.aarch64 76/154 Verifying : libmount-2.39.1-2.fc39.aarch64 77/154 Verifying : libnghttp2-1.55.1-1.fc39.aarch64 78/154 Verifying : libnsl2-2.0.0-5.fc38.aarch64 79/154 Verifying : libpkgconf-1.9.5-1.fc39.aarch64 80/154 Verifying : libpsl-0.21.2-3.fc39.aarch64 81/154 Verifying : libpwquality-1.4.5-5.fc39.aarch64 82/154 Verifying : libselinux-3.5-4.fc39.aarch64 83/154 Verifying : libsemanage-3.5-3.fc39.aarch64 84/154 Verifying : libsepol-3.5-1.fc39.aarch64 85/154 Verifying : libsigsegv-2.14-4.fc38.aarch64 86/154 Verifying : libsmartcols-2.39.1-2.fc39.aarch64 87/154 Verifying : libssh-0.10.5-1.fc39.aarch64 88/154 Verifying : libssh-config-0.10.5-1.fc39.noarch 89/154 Verifying : libstdc++-13.1.1-4.fc39.aarch64 90/154 Verifying : libtasn1-4.19.0-2.fc38.aarch64 91/154 Verifying : libtirpc-1.3.3-1.rc1.fc39.aarch64 92/154 Verifying : libunistring-1.1-3.fc38.aarch64 93/154 Verifying : libunistring1.0-1.0-1.fc38.aarch64 94/154 Verifying : libutempter-1.2.1-9.fc39.aarch64 95/154 Verifying : libuuid-2.39.1-2.fc39.aarch64 96/154 Verifying : libverto-0.3.2-5.fc38.aarch64 97/154 Verifying : libxcrypt-4.4.36-1.fc39.aarch64 98/154 Verifying : libxml2-2.10.4-2.fc39.aarch64 99/154 Verifying : libzstd-1.5.5-1.fc39.aarch64 100/154 Verifying : lua-libs-5.4.4-9.fc39.aarch64 101/154 Verifying : lua-srpm-macros-1-8.fc38.noarch 102/154 Verifying : lz4-libs-1.9.4-3.fc39.aarch64 103/154 Verifying : mpfr-4.2.0-2.fc39.aarch64 104/154 Verifying : ncurses-base-6.4-5.20230520.fc39.noarch 105/154 Verifying : ncurses-libs-6.4-5.20230520.fc39.aarch64 106/154 Verifying : ocaml-srpm-macros-8-1.fc39.noarch 107/154 Verifying : openblas-srpm-macros-2-13.fc38.noarch 108/154 Verifying : openldap-2.6.4-3.fc39.aarch64 109/154 Verifying : openssl-libs-1:3.0.8-2.fc39.aarch64 110/154 Verifying : p11-kit-0.24.1-6.fc38.aarch64 111/154 Verifying : p11-kit-trust-0.24.1-6.fc38.aarch64 112/154 Verifying : package-notes-srpm-macros-0.5-8.fc39.noarch 113/154 Verifying : pam-1.5.3-1.fc39.aarch64 114/154 Verifying : pam-libs-1.5.3-1.fc39.aarch64 115/154 Verifying : patch-2.7.6-21.fc39.aarch64 116/154 Verifying : pcre2-10.42-1.fc38.1.aarch64 117/154 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 118/154 Verifying : perl-srpm-macros-1-50.fc39.noarch 119/154 Verifying : pkgconf-1.9.5-1.fc39.aarch64 120/154 Verifying : pkgconf-m4-1.9.5-1.fc39.noarch 121/154 Verifying : pkgconf-pkg-config-1.9.5-1.fc39.aarch64 122/154 Verifying : popt-1.19-2.fc38.aarch64 123/154 Verifying : publicsuffix-list-dafsa-20230614-1.fc39.noarch 124/154 Verifying : pyproject-srpm-macros-1.9.0-1.fc39.noarch 125/154 Verifying : python-srpm-macros-3.12-1.fc39.noarch 126/154 Verifying : qt5-srpm-macros-5.15.10-1.fc39.noarch 127/154 Verifying : qt6-srpm-macros-6.5.1-1.fc39.noarch 128/154 Verifying : readline-8.2-3.fc38.aarch64 129/154 Verifying : redhat-rpm-config-261-1.fc39.noarch 130/154 Verifying : rpm-4.18.91-7.fc39.aarch64 131/154 Verifying : rpm-build-4.18.91-7.fc39.aarch64 132/154 Verifying : rpm-build-libs-4.18.91-7.fc39.aarch64 133/154 Verifying : rpm-libs-4.18.91-7.fc39.aarch64 134/154 Verifying : rpm-sequoia-1.4.1-1.fc39.aarch64 135/154 Verifying : rpmautospec-rpm-macros-0.3.5-3.fc39.noarch 136/154 Verifying : rust-srpm-macros-24-2.fc39.noarch 137/154 Verifying : sed-4.8-12.fc38.aarch64 138/154 Verifying : setup-2.14.3-3.fc39.noarch 139/154 Verifying : shadow-utils-2:4.13-7.fc39.aarch64 140/154 Verifying : sqlite-libs-3.42.0-6.fc39.aarch64 141/154 Verifying : systemd-libs-254~rc2-4.fc39.aarch64 142/154 Verifying : tar-2:1.34-8.fc39.aarch64 143/154 Verifying : tzdata-2023c-1.fc39.noarch 144/154 Verifying : unzip-6.0-60.fc38.aarch64 145/154 Verifying : util-linux-2.39.1-2.fc39.aarch64 146/154 Verifying : util-linux-core-2.39.1-2.fc39.aarch64 147/154 Verifying : which-2.21-39.fc39.aarch64 148/154 Verifying : xxhash-libs-0.8.1-5.fc39.aarch64 149/154 Verifying : xz-5.4.3-1.fc39.aarch64 150/154 Verifying : xz-libs-5.4.3-1.fc39.aarch64 151/154 Verifying : zip-3.0-36.fc38.aarch64 152/154 Verifying : zlib-1.2.13-3.fc38.aarch64 153/154 Verifying : zstd-1.5.5-1.fc39.aarch64 154/154 Installed: alternatives-1.24-1.fc39.aarch64 ansible-srpm-macros-1-10.fc39.noarch audit-libs-3.1.1-3.fc39.aarch64 authselect-1.4.2-2.fc38.aarch64 authselect-libs-1.4.2-2.fc38.aarch64 basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.aarch64 binutils-2.40-9.fc39.aarch64 binutils-gold-2.40-9.fc39.aarch64 bzip2-1.0.8-13.fc38.aarch64 bzip2-libs-1.0.8-13.fc38.aarch64 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.aarch64 coreutils-common-9.3-1.fc39.aarch64 cpio-2.14-2.fc39.aarch64 cracklib-2.9.11-1.fc39.aarch64 crypto-policies-20230614-1.git5f3458e.fc39.noarch curl-8.1.2-1.fc39.aarch64 cyrus-sasl-lib-2.1.28-10.fc39.aarch64 debugedit-5.0-9.fc39.aarch64 diffutils-3.10-2.fc39.aarch64 dwz-0.15-2.fc38.aarch64 ed-1.19-2.fc38.aarch64 efi-srpm-macros-5-8.fc39.noarch elfutils-0.189-3.fc39.aarch64 elfutils-debuginfod-client-0.189-3.fc39.aarch64 elfutils-default-yama-scope-0.189-3.fc39.noarch elfutils-libelf-0.189-3.fc39.aarch64 elfutils-libs-0.189-3.fc39.aarch64 fedora-gpg-keys-39-0.3.noarch fedora-release-39-0.21.noarch fedora-release-common-39-0.21.noarch fedora-release-identity-basic-39-0.21.noarch fedora-repos-39-0.3.noarch fedora-repos-rawhide-39-0.3.noarch file-5.44-4.fc39.aarch64 file-libs-5.44-4.fc39.aarch64 filesystem-3.18-4.fc39.aarch64 findutils-1:4.9.0-4.fc39.aarch64 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.2.2-1.fc39.aarch64 gdb-minimal-13.2-5.fc39.aarch64 gdbm-libs-1:1.23-3.fc38.aarch64 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37.9000-17.fc39.aarch64 glibc-common-2.37.9000-17.fc39.aarch64 glibc-gconv-extra-2.37.9000-17.fc39.aarch64 glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 gmp-1:6.2.1-4.fc38.aarch64 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-3.fc39.noarch grep-3.11-1.fc39.aarch64 gzip-1.12-3.fc38.aarch64 info-7.0.3-2.fc39.aarch64 jansson-2.13.1-6.fc38.aarch64 kernel-srpm-macros-1.0-19.fc39.noarch keyutils-libs-1.6.1-6.fc38.aarch64 krb5-libs-1.21-1.fc39.aarch64 libacl-2.3.1-7.fc39.aarch64 libarchive-3.6.1-5.fc39.aarch64 libattr-2.5.1-7.fc39.aarch64 libblkid-2.39.1-2.fc39.aarch64 libbrotli-1.0.9-12.fc39.aarch64 libcap-2.48-6.fc38.aarch64 libcap-ng-0.8.3-6.fc39.aarch64 libcom_err-1.47.0-1.fc39.aarch64 libcurl-8.1.2-1.fc39.aarch64 libdb-5.3.28-55.fc38.aarch64 libeconf-0.4.0-5.fc38.aarch64 libevent-2.1.12-8.fc38.aarch64 libfdisk-2.39.1-2.fc39.aarch64 libffi-3.4.4-3.fc39.aarch64 libgcc-13.1.1-4.fc39.aarch64 libgomp-13.1.1-4.fc39.aarch64 libidn2-2.3.4-2.fc38.aarch64 libmount-2.39.1-2.fc39.aarch64 libnghttp2-1.55.1-1.fc39.aarch64 libnsl2-2.0.0-5.fc38.aarch64 libpkgconf-1.9.5-1.fc39.aarch64 libpsl-0.21.2-3.fc39.aarch64 libpwquality-1.4.5-5.fc39.aarch64 libselinux-3.5-4.fc39.aarch64 libsemanage-3.5-3.fc39.aarch64 libsepol-3.5-1.fc39.aarch64 libsigsegv-2.14-4.fc38.aarch64 libsmartcols-2.39.1-2.fc39.aarch64 libssh-0.10.5-1.fc39.aarch64 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-4.fc39.aarch64 libtasn1-4.19.0-2.fc38.aarch64 libtirpc-1.3.3-1.rc1.fc39.aarch64 libunistring-1.1-3.fc38.aarch64 libunistring1.0-1.0-1.fc38.aarch64 libutempter-1.2.1-9.fc39.aarch64 libuuid-2.39.1-2.fc39.aarch64 libverto-0.3.2-5.fc38.aarch64 libxcrypt-4.4.36-1.fc39.aarch64 libxml2-2.10.4-2.fc39.aarch64 libzstd-1.5.5-1.fc39.aarch64 lua-libs-5.4.4-9.fc39.aarch64 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-3.fc39.aarch64 mpfr-4.2.0-2.fc39.aarch64 ncurses-base-6.4-5.20230520.fc39.noarch ncurses-libs-6.4-5.20230520.fc39.aarch64 ocaml-srpm-macros-8-1.fc39.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.4-3.fc39.aarch64 openssl-libs-1:3.0.8-2.fc39.aarch64 p11-kit-0.24.1-6.fc38.aarch64 p11-kit-trust-0.24.1-6.fc38.aarch64 package-notes-srpm-macros-0.5-8.fc39.noarch pam-1.5.3-1.fc39.aarch64 pam-libs-1.5.3-1.fc39.aarch64 patch-2.7.6-21.fc39.aarch64 pcre2-10.42-1.fc38.1.aarch64 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-50.fc39.noarch pkgconf-1.9.5-1.fc39.aarch64 pkgconf-m4-1.9.5-1.fc39.noarch pkgconf-pkg-config-1.9.5-1.fc39.aarch64 popt-1.19-2.fc38.aarch64 publicsuffix-list-dafsa-20230614-1.fc39.noarch pyproject-srpm-macros-1.9.0-1.fc39.noarch python-srpm-macros-3.12-1.fc39.noarch qt5-srpm-macros-5.15.10-1.fc39.noarch qt6-srpm-macros-6.5.1-1.fc39.noarch readline-8.2-3.fc38.aarch64 redhat-rpm-config-261-1.fc39.noarch rpm-4.18.91-7.fc39.aarch64 rpm-build-4.18.91-7.fc39.aarch64 rpm-build-libs-4.18.91-7.fc39.aarch64 rpm-libs-4.18.91-7.fc39.aarch64 rpm-sequoia-1.4.1-1.fc39.aarch64 rpmautospec-rpm-macros-0.3.5-3.fc39.noarch rust-srpm-macros-24-2.fc39.noarch sed-4.8-12.fc38.aarch64 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-7.fc39.aarch64 sqlite-libs-3.42.0-6.fc39.aarch64 systemd-libs-254~rc2-4.fc39.aarch64 tar-2:1.34-8.fc39.aarch64 tzdata-2023c-1.fc39.noarch unzip-6.0-60.fc38.aarch64 util-linux-2.39.1-2.fc39.aarch64 util-linux-core-2.39.1-2.fc39.aarch64 which-2.21-39.fc39.aarch64 xxhash-libs-0.8.1-5.fc39.aarch64 xz-5.4.3-1.fc39.aarch64 xz-libs-5.4.3-1.fc39.aarch64 zip-3.0-36.fc38.aarch64 zlib-1.2.13-3.fc38.aarch64 zstd-1.5.5-1.fc39.aarch64 Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: fedora-repos-39-0.3.noarch coreutils-9.3-1.fc39.aarch64 libutempter-1.2.1-9.fc39.aarch64 publicsuffix-list-dafsa-20230614-1.fc39.noarch diffutils-3.10-2.fc39.aarch64 qt5-srpm-macros-5.15.10-1.fc39.noarch elfutils-0.189-3.fc39.aarch64 util-linux-2.39.1-2.fc39.aarch64 xz-5.4.3-1.fc39.aarch64 libfdisk-2.39.1-2.fc39.aarch64 efi-srpm-macros-5-8.fc39.noarch ghc-srpm-macros-1.6.1-1.fc38.noarch unzip-6.0-60.fc38.aarch64 libevent-2.1.12-8.fc38.aarch64 pyproject-srpm-macros-1.9.0-1.fc39.noarch openblas-srpm-macros-2-13.fc38.noarch alternatives-1.24-1.fc39.aarch64 libsemanage-3.5-3.fc39.aarch64 gnat-srpm-macros-6-2.fc38.noarch rust-srpm-macros-24-2.fc39.noarch libbrotli-1.0.9-12.fc39.aarch64 rpm-build-libs-4.18.91-7.fc39.aarch64 qt6-srpm-macros-6.5.1-1.fc39.noarch sed-4.8-12.fc38.aarch64 gdb-minimal-13.2-5.fc39.aarch64 rpm-build-4.18.91-7.fc39.aarch64 sqlite-libs-3.42.0-6.fc39.aarch64 elfutils-libs-0.189-3.fc39.aarch64 popt-1.19-2.fc38.aarch64 pam-1.5.3-1.fc39.aarch64 libidn2-2.3.4-2.fc38.aarch64 libselinux-3.5-4.fc39.aarch64 xxhash-libs-0.8.1-5.fc39.aarch64 elfutils-libelf-0.189-3.fc39.aarch64 glibc-2.37.9000-17.fc39.aarch64 libstdc++-13.1.1-4.fc39.aarch64 libacl-2.3.1-7.fc39.aarch64 libpkgconf-1.9.5-1.fc39.aarch64 p11-kit-0.24.1-6.fc38.aarch64 debugedit-5.0-9.fc39.aarch64 systemd-libs-254~rc2-4.fc39.aarch64 libxml2-2.10.4-2.fc39.aarch64 libnghttp2-1.55.1-1.fc39.aarch64 ocaml-srpm-macros-8-1.fc39.noarch pkgconf-m4-1.9.5-1.fc39.noarch libsepol-3.5-1.fc39.aarch64 grep-3.11-1.fc39.aarch64 libuuid-2.39.1-2.fc39.aarch64 ansible-srpm-macros-1-10.fc39.noarch openldap-2.6.4-3.fc39.aarch64 libgomp-13.1.1-4.fc39.aarch64 cpio-2.14-2.fc39.aarch64 rpm-4.18.91-7.fc39.aarch64 util-linux-core-2.39.1-2.fc39.aarch64 authselect-1.4.2-2.fc38.aarch64 libeconf-0.4.0-5.fc38.aarch64 tar-1.34-8.fc39.aarch64 bzip2-1.0.8-13.fc38.aarch64 krb5-libs-1.21-1.fc39.aarch64 authselect-libs-1.4.2-2.fc38.aarch64 file-5.44-4.fc39.aarch64 libpwquality-1.4.5-5.fc39.aarch64 fedora-repos-rawhide-39-0.3.noarch libblkid-2.39.1-2.fc39.aarch64 elfutils-default-yama-scope-0.189-3.fc39.noarch setup-2.14.3-3.fc39.noarch file-libs-5.44-4.fc39.aarch64 libunistring1.0-1.0-1.fc38.aarch64 rpm-libs-4.18.91-7.fc39.aarch64 filesystem-3.18-4.fc39.aarch64 rpmautospec-rpm-macros-0.3.5-3.fc39.noarch curl-8.1.2-1.fc39.aarch64 mpfr-4.2.0-2.fc39.aarch64 lz4-libs-1.9.4-3.fc39.aarch64 libtasn1-4.19.0-2.fc38.aarch64 which-2.21-39.fc39.aarch64 findutils-4.9.0-4.fc39.aarch64 pcre2-syntax-10.42-1.fc38.1.noarch cracklib-2.9.11-1.fc39.aarch64 libzstd-1.5.5-1.fc39.aarch64 libgcc-13.1.1-4.fc39.aarch64 pkgconf-pkg-config-1.9.5-1.fc39.aarch64 fonts-srpm-macros-2.0.5-11.fc38.noarch tzdata-2023c-1.fc39.noarch pcre2-10.42-1.fc38.1.aarch64 go-srpm-macros-3.2.0-3.fc39.noarch glibc-gconv-extra-2.37.9000-17.fc39.aarch64 libsigsegv-2.14-4.fc38.aarch64 cyrus-sasl-lib-2.1.28-10.fc39.aarch64 gzip-1.12-3.fc38.aarch64 libssh-0.10.5-1.fc39.aarch64 coreutils-common-9.3-1.fc39.aarch64 libtirpc-1.3.3-1.rc1.fc39.aarch64 libpsl-0.21.2-3.fc39.aarch64 libssh-config-0.10.5-1.fc39.noarch libffi-3.4.4-3.fc39.aarch64 fpc-srpm-macros-1.3-7.fc38.noarch rpm-sequoia-1.4.1-1.fc39.aarch64 kernel-srpm-macros-1.0-19.fc39.noarch lua-libs-5.4.4-9.fc39.aarch64 libcap-2.48-6.fc38.aarch64 audit-libs-3.1.1-3.fc39.aarch64 libcom_err-1.47.0-1.fc39.aarch64 crypto-policies-20230614-1.git5f3458e.fc39.noarch zlib-1.2.13-3.fc38.aarch64 libmount-2.39.1-2.fc39.aarch64 libverto-0.3.2-5.fc38.aarch64 openssl-libs-3.0.8-2.fc39.aarch64 fedora-release-common-39-0.21.noarch pkgconf-1.9.5-1.fc39.aarch64 glibc-minimal-langpack-2.37.9000-17.fc39.aarch64 binutils-2.40-9.fc39.aarch64 keyutils-libs-1.6.1-6.fc38.aarch64 bzip2-libs-1.0.8-13.fc38.aarch64 ncurses-libs-6.4-5.20230520.fc39.aarch64 libxcrypt-4.4.36-1.fc39.aarch64 pam-libs-1.5.3-1.fc39.aarch64 fedora-gpg-keys-39-0.3.noarch libcurl-8.1.2-1.fc39.aarch64 libdb-5.3.28-55.fc38.aarch64 zstd-1.5.5-1.fc39.aarch64 gdbm-libs-1.23-3.fc38.aarch64 zip-3.0-36.fc38.aarch64 ca-certificates-2023.2.60-2.fc38.noarch info-7.0.3-2.fc39.aarch64 libsmartcols-2.39.1-2.fc39.aarch64 binutils-gold-2.40-9.fc39.aarch64 patch-2.7.6-21.fc39.aarch64 libattr-2.5.1-7.fc39.aarch64 fedora-release-identity-basic-39-0.21.noarch lua-srpm-macros-1-8.fc38.noarch shadow-utils-4.13-7.fc39.aarch64 p11-kit-trust-0.24.1-6.fc38.aarch64 elfutils-debuginfod-client-0.189-3.fc39.aarch64 perl-srpm-macros-1-50.fc39.noarch python-srpm-macros-3.12-1.fc39.noarch libnsl2-2.0.0-5.fc38.aarch64 libcap-ng-0.8.3-6.fc39.aarch64 glibc-common-2.37.9000-17.fc39.aarch64 redhat-rpm-config-261-1.fc39.noarch xz-libs-5.4.3-1.fc39.aarch64 jansson-2.13.1-6.fc38.aarch64 fedora-release-39-0.21.noarch basesystem-11-17.fc39.noarch bash-5.2.15-3.fc38.aarch64 readline-8.2-3.fc38.aarch64 libunistring-1.1-3.fc38.aarch64 ed-1.19-2.fc38.aarch64 dwz-0.15-2.fc38.aarch64 gmp-6.2.1-4.fc38.aarch64 package-notes-srpm-macros-0.5-8.fc39.noarch gawk-5.2.2-1.fc39.aarch64 libarchive-3.6.1-5.fc39.aarch64 ncurses-base-6.4-5.20230520.fc39.noarch Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-4.fc39.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-kq1epqau/ProDy/ProDy.spec) Config(child) 1 minutes 37 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1689765859.259330 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 4.1 starting (python version = 3.11.3, NVR = mock-4.1-1.fc38)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1689765859.259330/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1689765859.259330/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (fallback) Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 4.1 INFO: Mock Version: 4.1 INFO: Package manager dnf detected and used (direct choice) Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 53 kB/s | 2.2 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 108 kB/s | 3.8 kB 00:00 fedora 141 kB/s | 13 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for ProDy-2.4.0-4.fc39.src.rpm Start: build setup for ProDy-2.4.0-4.fc39.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Wrote: /builddir/build/SRPMS/ProDy-2.4.0-4.fc39.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 65 kB/s | 2.2 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 106 kB/s | 3.8 kB 00:00 fedora 289 kB/s | 13 kB 00:00 Dependencies resolved. ================================================================================================================================================ Package Arch Version Repository Size ================================================================================================================================================ Installing: gcc aarch64 13.1.1-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 M gcc-c++ aarch64 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urw-base35-p052-fonts-20200910-16.fc 108 MB/s | 974 kB 00:00 (176/179): urw-base35-z003-fonts-20200910-16.fc 64 MB/s | 276 kB 00:00 (177/179): xml-common-0.6.3-60.fc38.noarch.rpm 8.3 MB/s | 31 kB 00:00 (178/179): wise2-2.4.1-17.fc38.aarch64.rpm 112 MB/s | 939 kB 00:00 (179/179): xorg-x11-fonts-ISO8859-1-100dpi-7.5- 99 MB/s | 1.0 MB 00:00 -------------------------------------------------------------------------------- Total 228 MB/s | 191 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : libpng-2:1.6.37-14.fc38.aarch64 1/179 Installing : nspr-4.35.0-9.fc39.aarch64 2/179 Installing : libjpeg-turbo-2.1.4-2.fc38.aarch64 3/179 Installing : fonts-filesystem-1:2.0.5-11.fc38.noarch 4/179 Installing : urw-base35-fonts-common-20200910-16.fc38.noarch 5/179 Installing : nss-util-3.91.0-1.fc39.aarch64 6/179 Installing : libwebp-1.3.1-1.fc39.aarch64 7/179 Installing : python-rpm-macros-3.12-1.fc39.noarch 8/179 Installing : openjpeg2-2.5.0-3.fc38.aarch64 9/179 Installing : libmpc-1.3.1-2.fc38.aarch64 10/179 Installing : libgfortran-13.1.1-4.fc39.aarch64 11/179 Installing : lcms2-2.15-1.fc39.aarch64 12/179 Installing : python3-rpm-macros-3.12-1.fc39.noarch 13/179 Installing : dejavu-sans-fonts-2.37-20.fc38.noarch 14/179 Installing : python3-matplotlib-data-fonts-3.7.2-1.fc39.noarc 15/179 Installing : python3-matplotlib-data-3.7.2-1.fc39.noarch 16/179 Installing : tcl-1:8.6.12-4.fc39.aarch64 17/179 Installing : 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urw-base35-nimbus-sans-fonts-20200910-16.fc38.no 179/179 Running scriptlet: urw-base35-p052-fonts-20200910-16.fc38.noarch 179/179 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-16 179/179 Running scriptlet: urw-base35-z003-fonts-20200910-16.fc38.noarch 179/179 Running scriptlet: fontconfig-2.14.2-3.fc39.aarch64 179/179 Running scriptlet: crypto-policies-scripts-20230614-1.git5f3458e.fc 179/179 Running scriptlet: nss-3.91.0-1.fc39.aarch64 179/179 Running scriptlet: gcc-plugin-annobin-13.1.1-4.fc39.aarch64 179/179 Verifying : graphite2-1.3.14-11.fc38.aarch64 1/179 Verifying : python3-networkx-3.1-2.fc39~bootstrap.noarch 2/179 Verifying : abattis-cantarell-vf-fonts-0.301-9.fc38.noarch 3/179 Verifying : adobe-mappings-cmap-20230118-1.fc38.noarch 4/179 Verifying : adobe-mappings-cmap-deprecated-20230118-1.fc38.n 5/179 Verifying : adobe-mappings-pdf-20190401-3.fc38.noarch 6/179 Verifying : annobin-docs-12.21-1.fc39.noarch 7/179 Verifying : annobin-plugin-gcc-12.21-1.fc39.aarch64 8/179 Verifying : avahi-libs-0.8-23.fc39.aarch64 9/179 Verifying : cairo-1.17.8-4.fc39.aarch64 10/179 Verifying : cairo-gobject-1.17.8-4.fc39.aarch64 11/179 Verifying : cpp-13.1.1-4.fc39.aarch64 12/179 Verifying : crypto-policies-scripts-20230614-1.git5f3458e.fc 13/179 Verifying : cups-libs-1:2.4.6-1.fc39.aarch64 14/179 Verifying : dbus-libs-1:1.14.8-1.fc39.aarch64 15/179 Verifying : default-fonts-core-sans-4.0-1.fc39.noarch 16/179 Verifying : dejavu-sans-fonts-2.37-20.fc38.noarch 17/179 Verifying : expat-2.5.0-2.fc38.aarch64 18/179 Verifying : flex-2.6.4-12.fc38.aarch64 19/179 Verifying : flexiblas-3.3.1-3.fc39.aarch64 20/179 Verifying : flexiblas-netlib-3.3.1-3.fc39.aarch64 21/179 Verifying : flexiblas-openblas-openmp-3.3.1-3.fc39.aarch64 22/179 Verifying : fontconfig-2.14.2-3.fc39.aarch64 23/179 Verifying : fonts-filesystem-1:2.0.5-11.fc38.noarch 24/179 Verifying : freetype-2.13.1-1.fc39.aarch64 25/179 Verifying : fribidi-1.0.13-1.fc39.aarch64 26/179 Verifying : gc-8.2.2-3.fc38.aarch64 27/179 Verifying : gcc-13.1.1-4.fc39.aarch64 28/179 Verifying : gcc-c++-13.1.1-4.fc39.aarch64 29/179 Verifying : gcc-plugin-annobin-13.1.1-4.fc39.aarch64 30/179 Verifying : gd-2.3.3-11.fc39.aarch64 31/179 Verifying : gdk-pixbuf2-2.42.10-2.fc38.aarch64 32/179 Verifying : glib2-2.77.0-3.fc39.aarch64 33/179 Verifying : glibc-devel-2.37.9000-17.fc39.aarch64 34/179 Verifying : gnutls-3.8.0-6.fc39.aarch64 35/179 Verifying : google-droid-sans-fonts-20200215-15.fc39.noarch 36/179 Verifying : google-noto-fonts-common-20230601-3.fc39.noarch 37/179 Verifying : google-noto-sans-vf-fonts-20230601-3.fc39.noarch 38/179 Verifying : graphviz-8.1.0-4.fc39.aarch64 39/179 Verifying : gts-0.7.6-45.20121130.fc39.aarch64 40/179 Verifying : guile22-2.2.7-8.fc39.aarch64 41/179 Verifying : harfbuzz-8.0.1-2.fc39.aarch64 42/179 Verifying : highway-1.0.4-2.fc39.aarch64 43/179 Verifying : jbig2dec-libs-0.19-8.fc38.aarch64 44/179 Verifying : jbigkit-libs-2.1-25.fc38.aarch64 45/179 Verifying : kernel-headers-6.5.0-0.rc2.git0.1.fc39.aarch64 46/179 Verifying : lasi-1.1.3-10.fc38.aarch64 47/179 Verifying : lcms2-2.15-1.fc39.aarch64 48/179 Verifying : libICE-1.0.10-10.fc38.aarch64 49/179 Verifying : libSM-1.2.3-12.fc38.aarch64 50/179 Verifying : libX11-1.8.6-1.fc39.aarch64 51/179 Verifying : libX11-common-1.8.6-1.fc39.noarch 52/179 Verifying : libXau-1.0.11-2.fc38.aarch64 53/179 Verifying : libXext-1.3.5-2.fc38.aarch64 54/179 Verifying : libXft-2.3.8-2.fc39.aarch64 55/179 Verifying : libXpm-3.5.15-3.fc38.aarch64 56/179 Verifying : libXrender-0.9.11-2.fc38.aarch64 57/179 Verifying : libXt-1.2.1-4.fc38.aarch64 58/179 Verifying : libaom-3.6.1-1.fc39.aarch64 59/179 Verifying : libasan-13.1.1-4.fc39.aarch64 60/179 Verifying : libatomic-13.1.1-4.fc39.aarch64 61/179 Verifying : libavif-0.11.1-9.fc39.aarch64 62/179 Verifying : libb2-0.98.1-8.fc38.aarch64 63/179 Verifying : libdatrie-0.2.13-6.fc39.aarch64 64/179 Verifying : libdav1d-1.2.1-1.fc39.aarch64 65/179 Verifying : libfontenc-1.1.6-2.fc38.aarch64 66/179 Verifying : libgfortran-13.1.1-4.fc39.aarch64 67/179 Verifying : libgs-10.01.2-1.fc39.aarch64 68/179 Verifying : libijs-0.35-17.fc38.aarch64 69/179 Verifying : libimagequant-4.0.1-4.fc39.aarch64 70/179 Verifying : libjpeg-turbo-2.1.4-2.fc38.aarch64 71/179 Verifying : libjxl-1:0.8.2-1.fc39.aarch64 72/179 Verifying : libmpc-1.3.1-2.fc38.aarch64 73/179 Verifying : libpaper-1:2.1.0-1.fc39.aarch64 74/179 Verifying : libpng-2:1.6.37-14.fc38.aarch64 75/179 Verifying : libpq-15.0-3.fc38.aarch64 76/179 Verifying : libqhull_r-1:7.2.1-12.fc38.aarch64 77/179 Verifying : libraqm-0.8.0-4.fc38.aarch64 78/179 Verifying : librsvg2-2.56.90-1.fc39.aarch64 79/179 Verifying : libstdc++-devel-13.1.1-4.fc39.aarch64 80/179 Verifying : libthai-0.1.29-5.fc39.aarch64 81/179 Verifying : libtiff-4.4.0-5.fc38.aarch64 82/179 Verifying : libtool-ltdl-2.4.7-6.fc38.aarch64 83/179 Verifying : libubsan-13.1.1-4.fc39.aarch64 84/179 Verifying : libwebp-1.3.1-1.fc39.aarch64 85/179 Verifying : libxcb-1.13.1-11.fc38.aarch64 86/179 Verifying : libxcrypt-devel-4.4.36-1.fc39.aarch64 87/179 Verifying : libxslt-1.1.38-2.fc39.aarch64 88/179 Verifying : m4-1.4.19-4.fc37.aarch64 89/179 Verifying : make-1:4.4.1-1.fc39.aarch64 90/179 Verifying : mariadb-connector-c-3.3.5-1.fc39.aarch64 91/179 Verifying : mariadb-connector-c-config-3.3.5-1.fc39.noarch 92/179 Verifying : mkfontscale-1.2.2-3.fc38.aarch64 93/179 Verifying : mpdecimal-2.5.1-6.fc38.aarch64 94/179 Verifying : mysql-connector-python3-8.0.21-9.fc39.noarch 95/179 Verifying : netpbm-11.02.00-1.fc39.aarch64 96/179 Verifying : nettle-3.9.1-1.fc39.aarch64 97/179 Verifying : nspr-4.35.0-9.fc39.aarch64 98/179 Verifying : nss-3.91.0-1.fc39.aarch64 99/179 Verifying : nss-softokn-3.91.0-1.fc39.aarch64 100/179 Verifying : nss-softokn-freebl-3.91.0-1.fc39.aarch64 101/179 Verifying : nss-sysinit-3.91.0-1.fc39.aarch64 102/179 Verifying : nss-util-3.91.0-1.fc39.aarch64 103/179 Verifying : openblas-0.3.21-4.fc38.aarch64 104/179 Verifying : openblas-openmp-0.3.21-4.fc38.aarch64 105/179 Verifying : openjpeg2-2.5.0-3.fc38.aarch64 106/179 Verifying : pango-1.50.14-1.fc39.aarch64 107/179 Verifying : pixman-0.42.2-1.fc39.aarch64 108/179 Verifying : poppler-23.02.0-2.fc39.aarch64 109/179 Verifying : poppler-data-0.4.11-4.fc38.noarch 110/179 Verifying : poppler-glib-23.02.0-2.fc39.aarch64 111/179 Verifying : protobuf-3.19.6-5.fc39.aarch64 112/179 Verifying : pyproject-rpm-macros-1.9.0-1.fc39.noarch 113/179 Verifying : python-pip-wheel-23.1.2-2.fc39.noarch 114/179 Verifying : python-rpm-macros-3.12-1.fc39.noarch 115/179 Verifying : python3-3.12.0~b4-1.fc39.aarch64 116/179 Verifying : python3-appdirs-1.4.4-10.fc39.noarch 117/179 Verifying : python3-biopython-1.81-3.fc39.aarch64 118/179 Verifying : python3-brotli-1.0.9-12.fc39.aarch64 119/179 Verifying : python3-cairo-1.24.0-1.fc39.aarch64 120/179 Verifying : python3-contourpy-1.1.0-1.fc39.aarch64 121/179 Verifying : python3-cycler-0.11.0-8.fc39.noarch 122/179 Verifying : python3-dateutil-1:2.8.2-9.fc39.noarch 123/179 Verifying : python3-devel-3.12.0~b4-1.fc39.aarch64 124/179 Verifying : python3-fonttools-4.41.0-1.fc39.aarch64 125/179 Verifying : python3-fs-2.4.16-3.fc39.noarch 126/179 Verifying : python3-idna-3.4-3.fc39.noarch 127/179 Verifying : python3-isodate-0.6.1-8.fc39.noarch 128/179 Verifying : python3-kiwisolver-1.4.4-8.fc39.aarch64 129/179 Verifying : python3-libs-3.12.0~b4-1.fc39.aarch64 130/179 Verifying : python3-lxml-4.9.2-8.fc39.aarch64 131/179 Verifying : python3-matplotlib-3.7.2-1.fc39.aarch64 132/179 Verifying : python3-matplotlib-data-3.7.2-1.fc39.noarch 133/179 Verifying : python3-matplotlib-data-fonts-3.7.2-1.fc39.noarc 134/179 Verifying : python3-matplotlib-tk-3.7.2-1.fc39.aarch64 135/179 Verifying : python3-munkres-1.1.2-15.fc39.noarch 136/179 Verifying : python3-mysqlclient-2.1.1-4.fc39.aarch64 137/179 Verifying : python3-nose-1.3.7-41.fc39.noarch 138/179 Verifying : python3-numpy-1:1.24.3-2.fc39.aarch64 139/179 Verifying : python3-numpy-f2py-1:1.24.3-2.fc39.aarch64 140/179 Verifying : python3-olefile-0.46-20.fc39.noarch 141/179 Verifying : python3-packaging-23.1-3.fc39.noarch 142/179 Verifying : python3-pillow-10.0.0-1.fc39.aarch64 143/179 Verifying : python3-pillow-tk-10.0.0-1.fc39.aarch64 144/179 Verifying : python3-protobuf-3.19.6-5.fc39.aarch64 145/179 Verifying : python3-psycopg2-2.9.6-2.fc39.aarch64 146/179 Verifying : python3-pygraphviz-1.11-2.fc39.aarch64 147/179 Verifying : python3-pyparsing-3.0.9-10.fc39.noarch 148/179 Verifying : python3-pysocks-1.7.1-19.fc39.noarch 149/179 Verifying : python3-rdflib-6.2.0-3.fc39.noarch 150/179 Verifying : python3-reportlab-4.0.4-2.fc39.noarch 151/179 Verifying : python3-rpm-generators-14-6.fc39.noarch 152/179 Verifying : python3-rpm-macros-3.12-1.fc39.noarch 153/179 Verifying : python3-scipy-1.10.1-5.fc39.aarch64 154/179 Verifying : python3-setuptools-67.7.2-5.fc39.noarch 155/179 Verifying : python3-six-1.16.0-11.fc39.noarch 156/179 Verifying : python3-tkinter-3.12.0~b4-1.fc39.aarch64 157/179 Verifying : python3-urllib3+socks-1.26.16-1.fc39.noarch 158/179 Verifying : python3-urllib3-1.26.16-1.fc39.noarch 159/179 Verifying : rav1e-libs-0.6.6-1.fc39.aarch64 160/179 Verifying : shared-mime-info-2.2-3.fc38.aarch64 161/179 Verifying : svt-av1-libs-1.4.1-2.fc38.aarch64 162/179 Verifying : tcl-1:8.6.12-4.fc39.aarch64 163/179 Verifying : tk-1:8.6.12-4.fc38.aarch64 164/179 Verifying : urw-base35-bookman-fonts-20200910-16.fc38.noarch 165/179 Verifying : urw-base35-c059-fonts-20200910-16.fc38.noarch 166/179 Verifying : urw-base35-d050000l-fonts-20200910-16.fc38.noarc 167/179 Verifying : urw-base35-fonts-20200910-16.fc38.noarch 168/179 Verifying : urw-base35-fonts-common-20200910-16.fc38.noarch 169/179 Verifying : urw-base35-gothic-fonts-20200910-16.fc38.noarch 170/179 Verifying : urw-base35-nimbus-mono-ps-fonts-20200910-16.fc38 171/179 Verifying : urw-base35-nimbus-roman-fonts-20200910-16.fc38.n 172/179 Verifying : urw-base35-nimbus-sans-fonts-20200910-16.fc38.no 173/179 Verifying : urw-base35-p052-fonts-20200910-16.fc38.noarch 174/179 Verifying : urw-base35-standard-symbols-ps-fonts-20200910-16 175/179 Verifying : urw-base35-z003-fonts-20200910-16.fc38.noarch 176/179 Verifying : wise2-2.4.1-17.fc38.aarch64 177/179 Verifying : xml-common-0.6.3-60.fc38.noarch 178/179 Verifying : xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noar 179/179 Installed: abattis-cantarell-vf-fonts-0.301-9.fc38.noarch adobe-mappings-cmap-20230118-1.fc38.noarch adobe-mappings-cmap-deprecated-20230118-1.fc38.noarch adobe-mappings-pdf-20190401-3.fc38.noarch annobin-docs-12.21-1.fc39.noarch annobin-plugin-gcc-12.21-1.fc39.aarch64 avahi-libs-0.8-23.fc39.aarch64 cairo-1.17.8-4.fc39.aarch64 cairo-gobject-1.17.8-4.fc39.aarch64 cpp-13.1.1-4.fc39.aarch64 crypto-policies-scripts-20230614-1.git5f3458e.fc39.noarch cups-libs-1:2.4.6-1.fc39.aarch64 dbus-libs-1:1.14.8-1.fc39.aarch64 default-fonts-core-sans-4.0-1.fc39.noarch dejavu-sans-fonts-2.37-20.fc38.noarch expat-2.5.0-2.fc38.aarch64 flex-2.6.4-12.fc38.aarch64 flexiblas-3.3.1-3.fc39.aarch64 flexiblas-netlib-3.3.1-3.fc39.aarch64 flexiblas-openblas-openmp-3.3.1-3.fc39.aarch64 fontconfig-2.14.2-3.fc39.aarch64 fonts-filesystem-1:2.0.5-11.fc38.noarch freetype-2.13.1-1.fc39.aarch64 fribidi-1.0.13-1.fc39.aarch64 gc-8.2.2-3.fc38.aarch64 gcc-13.1.1-4.fc39.aarch64 gcc-c++-13.1.1-4.fc39.aarch64 gcc-plugin-annobin-13.1.1-4.fc39.aarch64 gd-2.3.3-11.fc39.aarch64 gdk-pixbuf2-2.42.10-2.fc38.aarch64 glib2-2.77.0-3.fc39.aarch64 glibc-devel-2.37.9000-17.fc39.aarch64 gnutls-3.8.0-6.fc39.aarch64 google-droid-sans-fonts-20200215-15.fc39.noarch google-noto-fonts-common-20230601-3.fc39.noarch google-noto-sans-vf-fonts-20230601-3.fc39.noarch graphite2-1.3.14-11.fc38.aarch64 graphviz-8.1.0-4.fc39.aarch64 gts-0.7.6-45.20121130.fc39.aarch64 guile22-2.2.7-8.fc39.aarch64 harfbuzz-8.0.1-2.fc39.aarch64 highway-1.0.4-2.fc39.aarch64 jbig2dec-libs-0.19-8.fc38.aarch64 jbigkit-libs-2.1-25.fc38.aarch64 kernel-headers-6.5.0-0.rc2.git0.1.fc39.aarch64 lasi-1.1.3-10.fc38.aarch64 lcms2-2.15-1.fc39.aarch64 libICE-1.0.10-10.fc38.aarch64 libSM-1.2.3-12.fc38.aarch64 libX11-1.8.6-1.fc39.aarch64 libX11-common-1.8.6-1.fc39.noarch libXau-1.0.11-2.fc38.aarch64 libXext-1.3.5-2.fc38.aarch64 libXft-2.3.8-2.fc39.aarch64 libXpm-3.5.15-3.fc38.aarch64 libXrender-0.9.11-2.fc38.aarch64 libXt-1.2.1-4.fc38.aarch64 libaom-3.6.1-1.fc39.aarch64 libasan-13.1.1-4.fc39.aarch64 libatomic-13.1.1-4.fc39.aarch64 libavif-0.11.1-9.fc39.aarch64 libb2-0.98.1-8.fc38.aarch64 libdatrie-0.2.13-6.fc39.aarch64 libdav1d-1.2.1-1.fc39.aarch64 libfontenc-1.1.6-2.fc38.aarch64 libgfortran-13.1.1-4.fc39.aarch64 libgs-10.01.2-1.fc39.aarch64 libijs-0.35-17.fc38.aarch64 libimagequant-4.0.1-4.fc39.aarch64 libjpeg-turbo-2.1.4-2.fc38.aarch64 libjxl-1:0.8.2-1.fc39.aarch64 libmpc-1.3.1-2.fc38.aarch64 libpaper-1:2.1.0-1.fc39.aarch64 libpng-2:1.6.37-14.fc38.aarch64 libpq-15.0-3.fc38.aarch64 libqhull_r-1:7.2.1-12.fc38.aarch64 libraqm-0.8.0-4.fc38.aarch64 librsvg2-2.56.90-1.fc39.aarch64 libstdc++-devel-13.1.1-4.fc39.aarch64 libthai-0.1.29-5.fc39.aarch64 libtiff-4.4.0-5.fc38.aarch64 libtool-ltdl-2.4.7-6.fc38.aarch64 libubsan-13.1.1-4.fc39.aarch64 libwebp-1.3.1-1.fc39.aarch64 libxcb-1.13.1-11.fc38.aarch64 libxcrypt-devel-4.4.36-1.fc39.aarch64 libxslt-1.1.38-2.fc39.aarch64 m4-1.4.19-4.fc37.aarch64 make-1:4.4.1-1.fc39.aarch64 mariadb-connector-c-3.3.5-1.fc39.aarch64 mariadb-connector-c-config-3.3.5-1.fc39.noarch mkfontscale-1.2.2-3.fc38.aarch64 mpdecimal-2.5.1-6.fc38.aarch64 mysql-connector-python3-8.0.21-9.fc39.noarch netpbm-11.02.00-1.fc39.aarch64 nettle-3.9.1-1.fc39.aarch64 nspr-4.35.0-9.fc39.aarch64 nss-3.91.0-1.fc39.aarch64 nss-softokn-3.91.0-1.fc39.aarch64 nss-softokn-freebl-3.91.0-1.fc39.aarch64 nss-sysinit-3.91.0-1.fc39.aarch64 nss-util-3.91.0-1.fc39.aarch64 openblas-0.3.21-4.fc38.aarch64 openblas-openmp-0.3.21-4.fc38.aarch64 openjpeg2-2.5.0-3.fc38.aarch64 pango-1.50.14-1.fc39.aarch64 pixman-0.42.2-1.fc39.aarch64 poppler-23.02.0-2.fc39.aarch64 poppler-data-0.4.11-4.fc38.noarch poppler-glib-23.02.0-2.fc39.aarch64 protobuf-3.19.6-5.fc39.aarch64 pyproject-rpm-macros-1.9.0-1.fc39.noarch python-pip-wheel-23.1.2-2.fc39.noarch python-rpm-macros-3.12-1.fc39.noarch python3-3.12.0~b4-1.fc39.aarch64 python3-appdirs-1.4.4-10.fc39.noarch python3-biopython-1.81-3.fc39.aarch64 python3-brotli-1.0.9-12.fc39.aarch64 python3-cairo-1.24.0-1.fc39.aarch64 python3-contourpy-1.1.0-1.fc39.aarch64 python3-cycler-0.11.0-8.fc39.noarch python3-dateutil-1:2.8.2-9.fc39.noarch python3-devel-3.12.0~b4-1.fc39.aarch64 python3-fonttools-4.41.0-1.fc39.aarch64 python3-fs-2.4.16-3.fc39.noarch python3-idna-3.4-3.fc39.noarch python3-isodate-0.6.1-8.fc39.noarch python3-kiwisolver-1.4.4-8.fc39.aarch64 python3-libs-3.12.0~b4-1.fc39.aarch64 python3-lxml-4.9.2-8.fc39.aarch64 python3-matplotlib-3.7.2-1.fc39.aarch64 python3-matplotlib-data-3.7.2-1.fc39.noarch python3-matplotlib-data-fonts-3.7.2-1.fc39.noarch python3-matplotlib-tk-3.7.2-1.fc39.aarch64 python3-munkres-1.1.2-15.fc39.noarch python3-mysqlclient-2.1.1-4.fc39.aarch64 python3-networkx-3.1-2.fc39~bootstrap.noarch python3-nose-1.3.7-41.fc39.noarch python3-numpy-1:1.24.3-2.fc39.aarch64 python3-numpy-f2py-1:1.24.3-2.fc39.aarch64 python3-olefile-0.46-20.fc39.noarch python3-packaging-23.1-3.fc39.noarch python3-pillow-10.0.0-1.fc39.aarch64 python3-pillow-tk-10.0.0-1.fc39.aarch64 python3-protobuf-3.19.6-5.fc39.aarch64 python3-psycopg2-2.9.6-2.fc39.aarch64 python3-pygraphviz-1.11-2.fc39.aarch64 python3-pyparsing-3.0.9-10.fc39.noarch python3-pysocks-1.7.1-19.fc39.noarch python3-rdflib-6.2.0-3.fc39.noarch python3-reportlab-4.0.4-2.fc39.noarch python3-rpm-generators-14-6.fc39.noarch python3-rpm-macros-3.12-1.fc39.noarch python3-scipy-1.10.1-5.fc39.aarch64 python3-setuptools-67.7.2-5.fc39.noarch python3-six-1.16.0-11.fc39.noarch python3-tkinter-3.12.0~b4-1.fc39.aarch64 python3-urllib3-1.26.16-1.fc39.noarch python3-urllib3+socks-1.26.16-1.fc39.noarch rav1e-libs-0.6.6-1.fc39.aarch64 shared-mime-info-2.2-3.fc38.aarch64 svt-av1-libs-1.4.1-2.fc38.aarch64 tcl-1:8.6.12-4.fc39.aarch64 tk-1:8.6.12-4.fc38.aarch64 urw-base35-bookman-fonts-20200910-16.fc38.noarch urw-base35-c059-fonts-20200910-16.fc38.noarch urw-base35-d050000l-fonts-20200910-16.fc38.noarch urw-base35-fonts-20200910-16.fc38.noarch urw-base35-fonts-common-20200910-16.fc38.noarch urw-base35-gothic-fonts-20200910-16.fc38.noarch urw-base35-nimbus-mono-ps-fonts-20200910-16.fc38.noarch urw-base35-nimbus-roman-fonts-20200910-16.fc38.noarch urw-base35-nimbus-sans-fonts-20200910-16.fc38.noarch urw-base35-p052-fonts-20200910-16.fc38.noarch urw-base35-standard-symbols-ps-fonts-20200910-16.fc38.noarch urw-base35-z003-fonts-20200910-16.fc38.noarch wise2-2.4.1-17.fc38.aarch64 xml-common-0.6.3-60.fc38.noarch xorg-x11-fonts-ISO8859-1-100dpi-7.5-35.fc38.noarch Complete! Finish: build setup for ProDy-2.4.0-4.fc39.src.rpm Start: rpmbuild ProDy-2.4.0-4.fc39.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1689724800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.K9Z5kv + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf ProDy-2.4.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.4.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd ProDy-2.4.0 + /usr/bin/mkdir -p SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/ProDy-change_requires.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + find prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.LURd3Q + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-aarch64-cpython-312 creating build/lib.linux-aarch64-cpython-312/prody copying prody/__init__.py -> build/lib.linux-aarch64-cpython-312/prody creating build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/select.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-aarch64-cpython-312/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/atomic creating build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/uniprot.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/quartataweb.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/pfam.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/goa.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/dali.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/cath.py -> build/lib.linux-aarch64-cpython-312/prody/database copying prody/database/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/database creating build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/dynamics creating build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/ensemble creating build/lib.linux-aarch64-cpython-312/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-aarch64-cpython-312/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/kdtree creating build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/transform.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/measure.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/contacts.py -> build/lib.linux-aarch64-cpython-312/prody/measure copying prody/measure/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/measure creating build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/header.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-aarch64-cpython-312/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/proteins creating build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-aarch64-cpython-312/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/sequence creating build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/trajectory creating build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/chromatin creating build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-aarch64-cpython-312/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/compounds creating build/lib.linux-aarch64-cpython-312/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-aarch64-cpython-312/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/domain_decomposition creating build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-aarch64-cpython-312/prody/utilities creating build/lib.linux-aarch64-cpython-312/prody/apps copying prody/apps/apptools.py -> build/lib.linux-aarch64-cpython-312/prody/apps copying prody/apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps creating build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps creating build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps creating build/lib.linux-aarch64-cpython-312/prody/tests copying prody/tests/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests creating build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/apps creating build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/atomic creating build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles creating build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/dynamics creating build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/ensemble creating build/lib.linux-aarch64-cpython-312/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-aarch64-cpython-312/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/kdtree creating build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/measure creating build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/proteins creating build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/sequence creating build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/trajectory creating build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-aarch64-cpython-312/prody/tests/utilities creating build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> build/lib.linux-aarch64-cpython-312/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-aarch64-cpython-312 creating build/temp.linux-aarch64-cpython-312/prody creating build/temp.linux-aarch64-cpython-312/prody/dynamics gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/dynamics/rtbtools.c -o build/temp.linux-aarch64-cpython-312/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/dynamics/rtbtools.cpython-312-aarch64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/dynamics/smtools.c -o build/temp.linux-aarch64-cpython-312/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/dynamics/smtools.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-aarch64-cpython-312/prody/sequence gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/msatools.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/msatools.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.msaio' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/msaio.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/msaio.cpython-312-aarch64-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/sequence/seqtools.c -o build/temp.linux-aarch64-cpython-312/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/sequence/seqtools.cpython-312-aarch64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-aarch64-cpython-312/prody/kdtree gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/kdtree/KDTree.c -o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTree.o gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.12/site-packages/numpy/core/include -I/usr/include/python3.12 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTree.o build/temp.linux-aarch64-cpython-312/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/kdtree/_CKDTree.cpython-312-aarch64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-aarch64-cpython-312/prody/proteins creating build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -fstack-protector-strong -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -D_GNU_SOURCE -fPIC -fwrapv -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Iprody/utilities/tnt -I/usr/include/python3.12 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign/ccealignmodule.o In file included from prody/utilities/tnt/tnt.h:41, from prody/proteins/ccealign/ccealignmodule.h:43, from prody/proteins/ccealign/ccealignmodule.cpp:38: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ~~~^~~ g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -Wl,--build-id=sha1 -g -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-312/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-312/prody/proteins/ccealign.cpython-312-aarch64-linux-gnu.so In member function ‘set_’, inlined from ‘__ct ’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ^ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.vkiiUm + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 ++ dirname /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.0 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 --prefix /usr running install /usr/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer, pypa/build or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64 creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12 creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-312/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-312/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-312/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-312/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-312/prody/tests/measure/test_transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-312/prody/tests/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-312/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-312/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-312/prody/tests/dynamics/test_signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/mmcif_6yfy.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/mmcif_6zu5.cif -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_cov.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/commute1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/exanm2nwl_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/hit1ubi.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_evalues.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pca2k39_vectors.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2k39_ca.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb2nwl-opm.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3hsy.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3o21.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb3p3w.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-312/prody/tests/datafiles/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-312/prody/tests/atomic/test_subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-312/prody/tests/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_energy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-312/prody/apps/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps copying build/lib.linux-aarch64-cpython-312/prody/apps/apptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles/mod_res_map.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/datafiles/saxs_water.dat -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-312/prody/utilities/TreeConstruction.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/catchall.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/checkers.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/doctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/drawtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/eigtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/laptools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/legacy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/logger.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/misctools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/pathtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/seqtools.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-312/prody/utilities/settings.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-312/prody/domain_decomposition/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-312/prody/domain_decomposition/spectrus.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/bird.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/ccd.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-312/prody/compounds/pdbligands.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/cluster.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/hic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/norm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-312/prody/chromatin/straw.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/dcdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/frame.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/psffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajbase.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajectory.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-312/prody/trajectory/trajfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/seqtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msaio.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msatools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/msafile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-312/prody/sequence/sequence.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/ccealign.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/blastpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/ciffile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/cifheader.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/dssp.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/emdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/header.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/localpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/pdbclusters.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/pdbfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/starfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/stride.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-312/prody/proteins/wwpdb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/contacts.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/measure.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-312/prody/measure/transform.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/_CKDTree.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-312/prody/kdtree/kdtree.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/conformation.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/ensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-312/prody/ensemble/pdbensemble.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/smtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/rtbtools.cpython-312-aarch64-linux-gnu.so -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/adaptive.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/analysis.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/anm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/bbenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/clustenm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/compare.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/editing.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/entropy.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/essa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/exanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/exgnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/gamma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/gnm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/heatmapper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/imanm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/mechstiff.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/mode.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/modeset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/nma.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/nmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/pca.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/perturb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/plotting.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/rtb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/sampling.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/signature.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-312/prody/dynamics/vmdfile.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/cath.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/dali.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/goa.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/pfam.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/quartataweb.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database copying build/lib.linux-aarch64-cpython-312/prody/database/uniprot.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database creating /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/acceptor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/angle.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atom.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atomgroup.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atomic.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/atommap.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/bond.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/chain.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/crossterm.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/dihedral.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/donor.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/fields.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/flags.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/functions.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/hierview.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/improper.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/nbexclusion.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/pointer.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/residue.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/segment.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/select.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/selection.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/atomic/subset.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-312/prody/__init__.py -> /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/apps/apptools.py to apptools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/catchall.py to catchall.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/checkers.py to checkers.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/doctools.py to doctools.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/drawtools.py to drawtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/eigtools.py to eigtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/laptools.py to laptools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/legacy.py to legacy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/logger.py to logger.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/misctools.py to misctools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/pathtools.py to pathtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/seqtools.py to seqtools.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/utilities/settings.py to settings.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/bird.py to bird.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/ccd.py to ccd.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/compounds/pdbligands.py to pdbligands.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/cluster.py to cluster.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/hic.py to hic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/norm.py to norm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/chromatin/straw.py to straw.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/frame.py to frame.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/psffile.py to psffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/analysis.py to analysis.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/msa.py to msa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/msafile.py to msafile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/plotting.py to plotting.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/sequence/sequence.py to sequence.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/ciffile.py to ciffile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/cifheader.py to cifheader.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/compare.py to compare.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/dssp.py to dssp.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/emdfile.py to emdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/header.py to header.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py to localpdb.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/starfile.py to starfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/stride.py to stride.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/contacts.py to contacts.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/measure.py to measure.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/measure/transform.py to transform.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/conformation.py to conformation.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/adaptive.py to adaptive.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/analysis.py to analysis.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/anm.py to anm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/clustenm.py to clustenm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/compare.py to compare.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/editing.py to editing.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/entropy.py to entropy.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/essa.py to essa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/exanm.py to exanm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/exgnm.py to exgnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/gamma.py to gamma.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/gnm.py to gnm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/imanm.py to imanm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/mode.py to mode.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/modeset.py to modeset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/nma.py to nma.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/pca.py to pca.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/perturb.py to perturb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/plotting.py to plotting.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/rtb.py to rtb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/sampling.py to sampling.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/signature.py to signature.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/cath.py to cath.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/dali.py to dali.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/goa.py to goa.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/pfam.py to pfam.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/quartataweb.py to quartataweb.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/database/uniprot.py to uniprot.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/__init__.py to __init__.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/acceptor.py to acceptor.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/angle.py to angle.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atom.py to atom.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atomic.py to atomic.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/atommap.py to atommap.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/bond.py to bond.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/chain.py to chain.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/crossterm.py to crossterm.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/dihedral.py to dihedral.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/donor.py to donor.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/fields.py to fields.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/flags.py to flags.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/functions.py to functions.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/hierview.py to hierview.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/improper.py to improper.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/pointer.py to pointer.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/residue.py to residue.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/segment.py to segment.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/select.py to select.cpython-312.pyc /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/selection.py to selection.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/atomic/subset.py to subset.cpython-312.pyc byte-compiling /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/prody/__init__.py to __init__.cpython-312.pyc writing byte-compilation script '/tmp/tmp2le1976q.py' /usr/bin/python3 /tmp/tmp2le1976q.py /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' removing /tmp/tmp2le1976q.py running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12/site-packages/ProDy-2.4.0-py3.12.egg-info running install_scripts Installing evol script to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin Installing prody script to /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + rm -rfv /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + rm -f /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.12-prody + cp -pr ./evol ./python3.12-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.12-prody ./python3.12-evol + for i in prody-3.12 + touch -r ./python3.12-prody prody-3.12 + install -p prody-3.12 /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./python3.12-prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + ln -sf /usr/bin/python3.12-prody /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/prody-3.12 + for i in evol-3.12 + touch -r ./python3.12-evol evol-3.12 + install -p evol-3.12 /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + install -p ./python3.12-evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin + ln -sf /usr/bin/python3.12-evol /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/bin/evol-3.12 + cd .. + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.4.0-4.fc39 --unique-debug-suffix -2.4.0-4.fc39.aarch64 --unique-debug-src-base ProDy-2.4.0-4.fc39.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.4.0 find-debuginfo: starting Extracting debug info from 7 files DWARF-compressing 7 files sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/ProDy-2.4.0-4.fc39.aarch64 464 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib/debug/usr/lib64/python3.12 using python3.12 Bytecompiling .py files below /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/lib64/python3.12 using python3.12 /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.12/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: python3-ProDy-2.4.0-4.fc39.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.jKOue7 + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + DOCDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/README.rst /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Owaqlo + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + LICENSEDIR=/builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.0/LICENSE.rst /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64/usr/share/licenses/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/evol-3.12 -> /usr/bin/python3.12-evol warning: absolute symlink: /usr/bin/prody-3.12 -> /usr/bin/python3.12-prody Provides: ProDy = 0:2.4.0-4.fc39 python-ProDy = 2.4.0-4.fc39 python3-ProDy = 2.4.0-4.fc39 python3-ProDy(aarch-64) = 2.4.0-4.fc39 python3.12-ProDy = 2.4.0-4.fc39 python3.12dist(prody) = 2.4 python3dist(prody) = 2.4 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.12 python3.12dist(biopython) python3.12dist(numpy) >= 1.10 python3.12dist(pyparsing) python3.12dist(scipy) python3.12dist(setuptools) Obsoletes: python-ProDy < 2.4.0-4.fc39 Processing files: ProDy-debugsource-2.4.0-4.fc39.aarch64 Provides: ProDy-debugsource = 2.4.0-4.fc39 ProDy-debugsource(aarch-64) = 2.4.0-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.4.0-4.fc39.aarch64 Provides: debuginfo(build-id) = 22485e28aca4106bcbde5e979bc2b48f9e222419 debuginfo(build-id) = 288ca9430d81d8396a687cb2a5af07a602e4b8f0 debuginfo(build-id) = 87f99f0f23b4ab86643dc31319fba24f9328832a debuginfo(build-id) = a12fcf1b030d9bf9c909db250eb4feabfd04dc32 debuginfo(build-id) = a6f1a585d9374d6c54b59cd05273011bc9f8a5a7 debuginfo(build-id) = b71399677f995c7548a3a18664922c1b0462c0d0 debuginfo(build-id) = f05ed5641cb23b9b5d0c31007a24ef5fc4a40d3a python-ProDy-debuginfo = 2.4.0-4.fc39 python3-ProDy-debuginfo = 2.4.0-4.fc39 python3-ProDy-debuginfo(aarch-64) = 2.4.0-4.fc39 python3.12-ProDy-debuginfo = 2.4.0-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(aarch-64) = 2.4.0-4.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 Wrote: /builddir/build/RPMS/ProDy-debugsource-2.4.0-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.4.0-4.fc39.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.4.0-4.fc39.aarch64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.8rpsdL + umask 022 + cd /builddir/build/BUILD + cd ProDy-2.4.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/ProDy-2.4.0-4.fc39.aarch64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.gIK6tW + umask 022 + cd /builddir/build/BUILD + rm -rf ProDy-2.4.0 ProDy-2.4.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/evol-3.12 -> /usr/bin/python3.12-evol absolute symlink: /usr/bin/prody-3.12 -> /usr/bin/python3.12-prody Finish: rpmbuild ProDy-2.4.0-4.fc39.src.rpm Finish: build phase for ProDy-2.4.0-4.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-aarch64-1689765859.259330/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.4.0-4.fc39.src.rpm) Config(child) 1 minutes 27 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool